BAC Information

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BAC

Clone NameB6Ng01-334M11
Chromosome2 (Build37)
Map Location 121,500,658 - 121,501,509
singlet/doubletsinglet
Overlap geneFrmd5
Upstream geneStard9, Cdan1, Ttbk2, Ubr1, Tmem62, Rnu3b-ps2, Ccndbp1, Epb4.2, Tgm5, LOC640543, Lcmt2, Adal, Zscan29, D2Ertd435e, Trp53bp1, Mtap1a, Hisppd2a, Ckmt1, Strc, Catsper2, Pdia3, Ell3, Serf2, LOC574418, 2310003F16Rik, Mfap1b, Wdr76p, Mfap1a, Wdr76
Downstream geneCasc4, Mageb3, Ctdspl2, Eif3s1, 4930424G05Rik, B2m, Trim69, 4933406J08Rik, LOC433468, LOC670832, Sord, Duox2, Duoxa2, Duoxa1, Duox1, Shf, Slc28a2, Bambi-ps1, Rp23-357i14.1, Gatm, Spata5l1, AA467197
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334M11.bB6Ng01-334M11.g
ACCGA120200GA120201
length852996
definitionB6Ng01-334M11.b B6Ng01-334M11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctataaagttctgatttccttcctttttgcctctttcagagaga
aattccatcaatcgctcaactctcttctccatcactcacacccctcactg
gcatcctcctatcttaagggaaaaaaacagaaaaagccagaagcaaaaac
cacttcttgtatcctccatctcctataacttctctttgccctcgcccttt
tggagacagtggaaaacagtggttagagaagggccctcacagctgcagtg
tctggcctcaagttgcacaccaaatggctgtgtgccggtgatacttgacc
aattaaaaagggaatgatgacctcatccgaacatagctaagagcctgggg
ttaggtcatgtgtgtcaaggactcagaacaaataactccaggttttcaat
attccagtgcccatctctgtaaatggtgtaacctctgcaggcaatggcat
gttggcctttagccctcatcttgtgggtttggctctgcgcatgggcttcc
agggtgacagaagctgtgttggaagtgtccttgttttcttcctgactctg
acattcactcttctgtttccattgtcccttcttcccagatatgccaatga
aaggctccatggccagcccactagtggtaatcttggtaaatccaatcaat
tcatttaaattctttttgatggggcagggctgtttagcagggctacggtc
tgacttagactacccctaagtcctgtgtgttaagagactttgcttccaag
gtggggttactgggtggaggcagtagaacttcaaaaagtagggctttggg
gtaagtgttaggtccttggaaatgtgaacttagaaactgagatccagcct
ct
gaattcactatgtagaccaggctggccttaaatttacagagatcttcctg
cctctgcttcctgagtgctgggagcaaaagcatgcaccacagcacccagc
aaacggtttgtttatttttatgtgtacacatatgtacctgtgtgagttta
aatgtgacgtatgcatgcatgtgcccatggaggccagagggcagcttttg
gatctcttggaaatggagttgcaggtagtttaaaatcacttgatgtgggt
gctggggagtgaactaaggtagtctgcaagagcattgaatgctcttaact
gctgagccatctctccggcctagaatttcttatatttttggttgtgagcc
tagcctttaatggctgagccatctctccagccccagccttgaatttcttg
aggaaggcaatcaaattcttctttccactttttgaaatgctactctttct
cttcctcctcctctacctctcaccttctcctgcacactcttctctgtgtc
ctcttcacttgtagtcaccctagtgtgcaattgcacaccggaacttcttg
ctccaatggaattaccatttactgcctatggatcaatcattctgtccctc
cttacccataacctccctcagcctctggaaacaccattttattctcaaca
gctaggacatcagctctaaactatttgcgaggtggagaccttctcgtact
tgttctgtgctgtatcatttcacttaccatagtgatctcctttcctaccc
atgctactacaggtcacagggttctgttctgtttatggcaataattgagt
ctacgctccacgtttctcttatctatccattttacggatgtccacttaag
ttatctccatttcaacaacctttgtgcacagtgctgcagagagcacagct
gtctttgttacatatcaatttcacacccttttgtgagcacacacagtgca
tgcgtgcttgatcatatgcttgttttctttaggatttcagtgtcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_121500658_121501509
seq2: B6Ng01-334M11.b_49_900

seq1  GAATTCCTATAAAGTTCTGATTTCCTTCCTTTTTGCCTCTTTCAGAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATAAAGTTCTGATTTCCTTCCTTTTTGCCTCTTTCAGAGAGA  50

seq1  AATTCCATCAATCGCTCAACTCTCTTCTCCATCACTCACACCCCTCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCATCAATCGCTCAACTCTCTTCTCCATCACTCACACCCCTCACTG  100

seq1  GCATCCTCCTATCTTAAGGGAAAAAAACAGAAAAAGCCAGAAGCAAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCTCCTATCTTAAGGGAAAAAAACAGAAAAAGCCAGAAGCAAAAAC  150

seq1  CACTTCTTGTATCCTCCATCTCCTATAACTTCTCTTTGCCCTCGCCCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTTGTATCCTCCATCTCCTATAACTTCTCTTTGCCCTCGCCCTTT  200

seq1  TGGAGACAGTGGAAAACAGTGGTTAGAGAAGGGCCCTCACAGCTGCAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACAGTGGAAAACAGTGGTTAGAGAAGGGCCCTCACAGCTGCAGTG  250

seq1  TCTGGCCTCAAGTTGCACACCAAATGGCTGTGTGCCGGTGATACTTGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCCTCAAGTTGCACACCAAATGGCTGTGTGCCGGTGATACTTGACC  300

seq1  AATTAAAAAGGGAATGATGACCTCATCCGAACATAGCTAAGAGCCTGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAAAGGGAATGATGACCTCATCCGAACATAGCTAAGAGCCTGGGG  350

seq1  TTAGGTCATGTGTGTCAAGGACTCAGAACAAATAACTCCAGGTTTTCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTCATGTGTGTCAAGGACTCAGAACAAATAACTCCAGGTTTTCAAT  400

seq1  ATTCCAGTGCCCATCTCTGTAAATGGTGTAACCTCTGCAGGCAATGGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGTGCCCATCTCTGTAAATGGTGTAACCTCTGCAGGCAATGGCAT  450

seq1  GTTGGCCTTTAGCCCTCATCTTGTGGGTTTGGCTCTGCGCATGGGCTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCCTTTAGCCCTCATCTTGTGGGTTTGGCTCTGCGCATGGGCTTCC  500

seq1  AGGGTGACAGAAGCTGTGTTGGAAGTGTCCTTGTTTTCTTCCTGACTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGACAGAAGCTGTGTTGGAAGTGTCCTTGTTTTCTTCCTGACTCTG  550

seq1  ACATTCACTCTTCTGTTTCCATTGTCCCTTCTTCCCAGATATGCCAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCACTCTTCTGTTTCCATTGTCCCTTCTTCCCAGATATGCCAATGA  600

seq1  AAGGCTCCATGGCCAGCCCACTAGTGGTAATCTTGGTAAATCCAATCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCCATGGCCAGCCCACTAGTGGTAATCTTGGTAAATCCAATCAAT  650

seq1  TCATTTAAATTCTTTTTGATGGGGCAGGGCTGTTTAGCAGGGCTACGGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAAATTCTTTTTGATGGGGCAGGGCTGTTTAGCAGGGCTACGGTC  700

seq1  TGACTTAGACTACCCCTAAGTCCTGTGTGTTAAGAGACTTTGCTTCCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAGACTACCCCTAAGTCCTGTGTGTTAAGAGACTTTGCTTCCAAG  750

seq1  GTGGGGTTACTGGGTGGAGGCAGTAGAACTTCAAAAAGTAGGGCTTTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTTACTGGGTGGAGGCAGTAGAACTTCAAAAAGTAGGGCTTTGGG  800

seq1  GTAAGTGTTAGGTCCTTGGAAATGTGAACTTAGAAACTGAGATCCAGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTGTTAGGTCCTTGGAAATGTGAACTTAGAAACTGAGATCCAGCCT  850

seq1  CT  852
      ||
seq2  CT  852