BAC Information

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BAC

Clone NameB6Ng01-335O14
Chromosome2 (Build37)
Map Location 125,840,619 - 125,841,738
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc24a5, Myef2, LOC100043375, Slc12a1, Dut, A530010F05Rik, LOC100043698, Fbn1, Cep152, Shc4, Eid1, 3110001I20Rik, Cops2, Galk2
Downstream geneFgf7, Dtwd1, Atp8b4, Slc27a2, Hdc, Gabpb1, Usp8, LOC100043714, Usp50, Trpm7, 2010106G01Rik, Ap4e1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335O14.bB6Ng01-335O14.g
ACCGA120991GA120992
length1,1061,183
definitionB6Ng01-335O14.b B6Ng01-335O14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatcctcaagggtgactgagaaaaattggtgggtgattatgaa
tttatttaaatgctatagttgctgaacaaatgctctgagtgatgtggatt
tacccctgaagcaatagagttgttaatggatctaatcgtctcagatcgtc
ccgagtttcattccccagagactgcccggcaaaggaaaaaggtagcgtgg
tgggttacaggatgctgaaagcaatgcctcttactcactgtcatttaaga
attcagaatatttgacagctgagagtagtcctttgtgtcagcaacagaaa
tggactggccccaccacttcagcagtgacggagaccagaagccacagggc
tgcccagccacctctactgtagaggaagcatactgagttcattcaaaacc
ttgaaattgtgaaatcaaagtgattaaagggttttcactttggccagctt
cgtgttatatgttctttatatgtgtaaattctttttttttttttcatgta
aagtgtatgtgtgaaggtcaaatgcagggagaaacccgggtttactgtgc
ggtcccctctgtgtgaatgttaggtggagggtgctgtggttcaccctatc
atttcctctttgtctacagtcattgtgttctaatgggaacaatgctagca
gaggccttagtgacgcagtgcgggtcccctgccctttcgccatcatcttc
ccatcagaatgtttactgtaagtcagacctctgagctgaacaaagagaag
gcatttgattccattattttagaaaataaattataggctttccaactctt
ttccatgggtggattcttgatactcaccactaacaatatgccttaaaata
agtccatattccaagatcaaatttgcagaattcatttctgcttttaattt
aaaccaagctctttctcactgaatgagaaattaacagttaaaatgagtga
ttagaataagaatgggctcttgcaaggctggtaatcctaattcttttgat
ctggctacacttagctgctgcctgactgcagagactcacagattcagact
attgaaatcatcacaccaggaggtaacacagaagcttcattccaaagaca
ccgagg
gaattctgtcttgttatgtaccccatatttttaaatgggatatttggata
tttggtgtttaacttcttgagttcttaataaatgttggcagttagccctt
tgtgagatgtaaggttggtgaagatcttttcccaatctgtagactgccat
tttattttattttattttattttattttattttattttattttactttat
tgacagtgtcctttgccttacagaagccttgcagtttcatgaagtcccat
ttatcaatagttaatcttaagagtatgagccattagtattctgttcagaa
aactgtgcctgtaccaatggcttgaaggatattttccactttctattcca
tgagatttatgttgaggtccttgatccactggacttgagttttgtgcagg
ttgataaatacggatctattttcacccctctacatgtagacatccaatta
gatagaccagccccatttgttgaagatgctttctttttcccattatatgg
tttggcttctttatcaaagtatccataagtatatgggtttatttctgagt
ctttaattctattccattggtcgacctgtcagtttctgtaccaatactat
gcagtttttgtcactattgctctgtagtacatcttgaggcactttattgt
tcaggattgttttgactatcctgggtttttgtttttccatatgaagttga
gaattgctgtttcaaggtctataaaatttttttgattcatctgcaaatgt
gaagcaaacatttgttgtattttaaggtatgtctgataaaggttggaata
aaggtgacagtttaaatgataggagagatgactctttaaatgagatgtgt
tgaaatttagtaaattgaaatataaataatttatttccacttatgtaaat
ataaatagaatttgctatgactaaaatattagcaatgaaatttcgtgtaa
gtgagtgtgtggtgtgtgtgtgcatgtgtgtttaaatgagtgctttcgtt
ccatgtttggagaaatgtatttaaggagcaaaaataaaaatagaacaatt
ttaaagttaatttttctttttaatttgtcactaaacactttttcaaacaa
atattctgttcagtacaacttcttagtctcagactccaactccatatcat
cagagtccttccactactccatatacacccgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_125840619_125841738
seq2: B6Ng01-335O14.b_48_1153

seq1  GAATTCAAATCCTCAAGGGTGACTGAGAAAAATTGGTGGGTGATTATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCCTCAAGGGTGACTGAGAAAAATTGGTGGGTGATTATGAA  50

seq1  TTTATTTAAATGCTATAGTTGCTGAACAAATGCTCTGAGTGATGTGGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAAATGCTATAGTTGCTGAACAAATGCTCTGAGTGATGTGGATT  100

seq1  TACCCCTGAAGCAATAGAGTTGTTAATGGATCTAATCGTCTCAGATCGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCTGAAGCAATAGAGTTGTTAATGGATCTAATCGTCTCAGATCGTC  150

seq1  CCGAGTTTCATTCCCCAGAGACTGCCCGGCAAAGGAAAAAGGTAGCGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGTTTCATTCCCCAGAGACTGCCCGGCAAAGGAAAAAGGTAGCGTGG  200

seq1  TGGGTTACAGGATGCTGAAAGCAATGCCTCTTACTCACTGTCATTTAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTACAGGATGCTGAAAGCAATGCCTCTTACTCACTGTCATTTAAGA  250

seq1  ATTCAGAATATTTGACAGCTGAGAGTAGTCCTTTGTGTCAGCAACAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAATATTTGACAGCTGAGAGTAGTCCTTTGTGTCAGCAACAGAAA  300

seq1  TGGACTGGCCCCACCACTTCAGCAGTGACGGAGACCAGAAGCCACAGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGGCCCCACCACTTCAGCAGTGACGGAGACCAGAAGCCACAGGGC  350

seq1  TGCCCAGCCACCTCTACTGTAGAGGAAGCATACTGAGTTCATTCAAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGCCACCTCTACTGTAGAGGAAGCATACTGAGTTCATTCAAAACC  400

seq1  TTGAAATTGTGAAATCAAAGTGATTAAAGGGTTTTCACTTTGGCCAGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATTGTGAAATCAAAGTGATTAAAGGGTTTTCACTTTGGCCAGCTT  450

seq1  CGTGTTATATGTTCTTTATATGTGTAAATTCTTTTTTTTTTTTTCATGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTATATGTTCTTTATATGTGTAAATTCTTTTTTTTTTTTTCATGTA  500

seq1  AAGTGTATGTGTGAAGGTCAAATGCAGGGAGAAACCCGGGTTTACTGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTATGTGTGAAGGTCAAATGCAGGGAGAAACCCGGGTTTACTGTGC  550

seq1  GGTCCCCTCTGTGTGAATGTTAGGTGGAGGGTGCTGTGGTTCACCCTATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCCTCTGTGTGAATGTTAGGTGGAGGGTGCTGTGGTTCACCCTATC  600

seq1  ATTTCCTCTTTGTCTACAGTCATTGTGTTCTAATGGGAACAATGCTAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTCTTTGTCTACAGTCATTGTGTTCTAATGGGAACAATGCTAGCA  650

seq1  GAGGCCTTAGTGACGCAGTGCGGGTCCCCTGCCCTTTCGCCATCATCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCTTAGTGACGCAGTGCGGGTCCCCTGCCCTTTCGCCATCATCTTC  700

seq1  CCATCAGAATGTTTACTGTAAGTCAGACCTCTGAGCTGAACAAAGAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGAATGTTTACTGTAAGTCAGACCTCTGAGCTGAACAAAGAGAAG  750

seq1  GCATTTGATTCCATTATTTTAGAAAATAAATTATAGGCTTTCCAACTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGATTCCATTATTTTAGAAAATAAATTATAGGCTTTCCAACTCTT  800

seq1  TTCCATGGGTGGATTCTTGATACTCACCACTAACAATATGCCTTAAAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGGGTGGATTCTTGATACTCACCACTAACAATATGCCTTAAAATA  850

seq1  AGTCCATATTCCAAGATCAAATTTGCAGAATTCATTTCTGCTTTTAA-TT  899
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGTCCATATTCCAAGATCAAATTTGCAGAATTCATTTCTGCTTTTAATTT  900

seq1  AAACCAAGCTCTTTCTCACTGAATGAGAAATTAACAGTTAAAATGAGTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAGCTCTTTCTCACTGAATGAGAAATTAACAGTTAAAATGAGTGA  950

seq1  TTAGAATAAGAATGGGCTCTTGCAAGGCTGGTAATCCTAAATTCTTTTGA  999
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTAGAATAAGAATGGGCTCTTGCAAGGCTGGTAATCCT-AATTCTTTTGA  999

seq1  TCTGGCTACCACTAAGCTGCTGCCCTGACTGCAGAGACTCACAGAATCCA  1049
      |||||||| |||| |||||||| ||||||||||||||||||||| || ||
seq2  TCTGGCTA-CACTTAGCTGCTG-CCTGACTGCAGAGACTCACAG-ATTCA  1046

seq1  GACTTAATGAAATCAATCACACCAGGGAAGGGGCACCAACCAGAAGCTTC  1099
      ||| || ||||||| ||||||||||    | || | ||  ||||||||||
seq2  GAC-TATTGAAATC-ATCACACCAG----GAGGTAACA--CAGAAGCTTC  1088

seq1  ATTTTCCACAAGACACCGAGG  1120
      |  ||||| ||||||||||||
seq2  A--TTCCA-AAGACACCGAGG  1106