BAC Information

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BAC

Clone NameB6Ng01-337C19
Chromosome2 (Build37)
Map Location 142,672,125 - 142,864,716
singlet/doubletdoublet
Overlap geneKif16b
Upstream geneLOC668913, LOC668914
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1, 4930517K23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337C19.bB6Ng01-337C19.g
ACCGA121882GA121883
length1,178692
definitionB6Ng01-337C19.b B6Ng01-337C19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,672,125 - 142,673,300)(142,864,034 - 142,864,716)
sequence
gaattcagaagatcctgaagtgaggccatttcagcaatcatgcaaggttc
tgtagaacagcatcatagccaggccacagacataatatcagaggcactac
tgagtcattatagccacctatgacagtgctaagtgagaccaggactcaga
aaggtgttcaaatatatctccccttgctaaaatacattcatagtcataaa
atgcatgggtagaattttaaatattattttaagcatctgaatttcttttt
actaatggagattatgccgctaatcctatctcatgctaaatttccatcca
taattgataactattagatatttaatcatttaaggcttagtggatgaaat
tttacacccagcgtgcataaggaatgcaaagtctgataggaagctgatat
agacactggctaactcatctgaagctttacttagtacttatttactcaaa
tcaataccacaggataattgtctcattaagatctagaaatagatgccact
actcaaggaaaattatctataaatcgcagaaaaactcaacctggttccct
tgagcgagcagggttttcagcctggctatttcagctctcagctcacggat
gagtttgacgttggcatcctcattaatggtaggcttgttgatgatgtttt
tggctctatttgcatagcgaagggtacttagggtttctccataattgaca
tcagcaggtgaaatggctgtgaagaatgaatatgaaaaataattcatcct
gcactccatgtttcatttaacacaaagatggtttgtaatttaaaagtcag
atcaaccccaggtcacaagaaagactaaatattcattgccacagtaatga
atattaaaaaaaataattatctaagcttataggaagggtgttcactatat
caaattaaatgtctttttgctcttctcacatttctgctcagccatttgaa
caacttcagaaggagggtgtgagatatcctcacacagggcagggttttct
caactgctaacaggaatttcagaactgtgcttcttctagtgtgcagaatt
taaaattactttttacatttcttgattaaaaccaagtcatctaataaatt
ccagcaccaagcaggtttttgatgtccacagaattactaattcgttcctt
ctccagcctgattaattcctaactgcag
gaattcacccatcagaagccagatgtaattctgtatacctgtaaccttgt
cactgggcaggtttaggacccagtggggtcatcttctggggcccaatgga
catctcattagggccatgtttagagaaagagataaggtgggaagttattg
agtagattatccaatgccctgttctgccccaccatgtgtacataccatgt
tacagtgcctacatacatatgtgtacaccagagagagagagagagagaga
gagagagagagagagagagagagagagagagagagagagaggaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaga
agaagaagaagaagaaagagagagagagagagagagagagagagagagag
agagagagagagagaaatatatgcatatgacagtgaagaacacagtccaa
agaagctcctcaaagacaaagttacttcattttttttcttacatcttctt
gctctttctgctctcattcataaggtcatagtggccgagatggttcctgg
aatttcagccaaattccagaccacaggaaagaggaatgcactgcactaaa
ctactacctgtcgatttttctttttggccataactacgttgcttggggct
cagaaagtttcaaacagtgccaggaaaatgcagctcctagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142672125_142673300
seq2: B6Ng01-337C19.b_46_1223

seq1  GAATTCAGAAGATCCTGAAGTGAGGCCATTTCAGCAATCATGCAAGGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAGATCCTGAAGTGAGGCCATTTCAGCAATCATGCAAGGTTC  50

seq1  TGTAGAACAGCATCATAGCCAGGCCACAGACATAATATCAGAGGCACTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAACAGCATCATAGCCAGGCCACAGACATAATATCAGAGGCACTAC  100

seq1  TGAGTCATTATAGCCACCTATGACAGTGCTAAGTGAGACCAGGACTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCATTATAGCCACCTATGACAGTGCTAAGTGAGACCAGGACTCAGA  150

seq1  AAGGTGTTCAAATATATCTCCCCTTGCTAAAATACATTCATAGTCATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGTTCAAATATATCTCCCCTTGCTAAAATACATTCATAGTCATAAA  200

seq1  ATGCATGGGTAGAATTTTAAATATTATTTTAAGCATCTGAATTTCTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGGGTAGAATTTTAAATATTATTTTAAGCATCTGAATTTCTTTTT  250

seq1  ACTAATGGAGATTATGCCGCTAATCCTATCTCATGCTAAATTTCCATCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGGAGATTATGCCGCTAATCCTATCTCATGCTAAATTTCCATCCA  300

seq1  TAATTGATAACTATTAGATATTTAATCATTTAAGGCTTAGTGGATGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGATAACTATTAGATATTTAATCATTTAAGGCTTAGTGGATGAAAT  350

seq1  TTTACACCCAGCGTGCATAAGGAATGCAAAGTCTGATAGGAAGCTGATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACCCAGCGTGCATAAGGAATGCAAAGTCTGATAGGAAGCTGATAT  400

seq1  AGACACTGGCTAACTCATCTGAAGCTTTACTTAGTACTTATTTACTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTGGCTAACTCATCTGAAGCTTTACTTAGTACTTATTTACTCAAA  450

seq1  TCAATACCACAGGATAATTGTCTCATTAAGATCTAGAAATAGATGCCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATACCACAGGATAATTGTCTCATTAAGATCTAGAAATAGATGCCACT  500

seq1  ACTCAAGGAAAATTATCTATAAATCGCAGAAAAACTCAACCTGGTTCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGGAAAATTATCTATAAATCGCAGAAAAACTCAACCTGGTTCCCT  550

seq1  TGAGCGAGCAGGGTTTTCAGCCTGGCTATTTCAGCTCTCAGCTCACGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCGAGCAGGGTTTTCAGCCTGGCTATTTCAGCTCTCAGCTCACGGAT  600

seq1  GAGTTTGACGTTGGCATCCTCATTAATGGTAGGCTTGTTGATGATGTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGACGTTGGCATCCTCATTAATGGTAGGCTTGTTGATGATGTTTT  650

seq1  TGGCTCTATTTGCATAGCGAAGGGTACTTAGGGTTTCTCCATAATTGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTATTTGCATAGCGAAGGGTACTTAGGGTTTCTCCATAATTGACA  700

seq1  TCAGCAGGTGAAATGGCTGTGAAGAATGAATATGAAAAATAATTCATCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGGTGAAATGGCTGTGAAGAATGAATATGAAAAATAATTCATCCT  750

seq1  GCACTCCATGTTTCATTTAACACAAAGATGGTTTGTAATTTAAAAGTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCCATGTTTCATTTAACACAAAGATGGTTTGTAATTTAAAAGTCAG  800

seq1  ATCAACCCCAGGTCACAAGAAAGACTAAATATTCATTGCCACAGTAATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACCCCAGGTCACAAGAAAGACTAAATATTCATTGCCACAGTAATGA  850

seq1  ATATTAAAAAAAATAATTATCTAAGCTTATAGGAAAGGGTGTTCACTATA  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATATTAAAAAAAATAATTATCTAAGCTTATAGG-AAGGGTGTTCACTATA  899

seq1  TCAAATTAAATGTCTTTTTGCTCTTCTCACATTTCTGCTCAGCCATTTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTAAATGTCTTTTTGCTCTTCTCACATTTCTGCTCAGCCATTTGA  949

seq1  ACAACTTCAGAA-GAGGGTGTGAGATATCC-CACACAGGGAAGGGTTTTC  998
      |||||||||||| ||||||||||||||||| ||||||||| |||||||||
seq2  ACAACTTCAGAAGGAGGGTGTGAGATATCCTCACACAGGGCAGGGTTTTC  999

seq1  TCAACTGCTAACAGGAAATTTCAGAACTGTGCTTC-TCTAGTGTGCAGAA  1047
      ||||||||||||||| ||||||||||||||||||| ||||||||||||||
seq2  TCAACTGCTAACAGG-AATTTCAGAACTGTGCTTCTTCTAGTGTGCAGAA  1048

seq1  ATTAAAA-TAC-TTTTACATTTC-TGATAAAAACC-AGTCATCTATAAAA  1093
       |||||| ||| ||||||||||| |||| |||||| |||||||||  |||
seq2  TTTAAAATTACTTTTTACATTTCTTGATTAAAACCAAGTCATCTAATAAA  1098

seq1  TCCCAGCACCCAGCAGGTTTTTAAATGTCAACAG-ATTACTTAATTCCTT  1142
      | |||||||| |||||||||||  ||||| |||| ||||| |||||| ||
seq2  TTCCAGCACCAAGCAGGTTTTT-GATGTCCACAGAATTAC-TAATTCGTT  1146

seq1  CCTTCTCCAAGCTTTGATTAATTTCATACTGCAG  1176
      |||||||||  |  ||||||||| |  |||||||
seq2  CCTTCTCCAGCC--TGATTAATTCCTAACTGCAG  1178

seq1: chr2_142864034_142864716
seq2: B6Ng01-337C19.g_66_757 (reverse)

seq1  TACTAGGAGCTGCA-TTTCCTGGCACTGTTTGAAACTTTCTGAG-CCCAA  48
      |||||||||||||| ||||||||||||||||||||||||||||| |||||
seq2  TACTAGGAGCTGCATTTTCCTGGCACTGTTTGAAACTTTCTGAGCCCCAA  50

seq1  GCAACGTAGTTATGGCCAAAAAGAAAAATCGACAGGTAGTAGTTTAGTGC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACGTAGTTATGGCCAAAAAGAAAAATCGACAGGTAGTAGTTTAGTGC  100

seq1  AGTGCATTCCTCTTTCCTGTGGTCTGGAATTTGGCTGAAATTCCAGGAAC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATTCCTCTTTCCTGTGGTCTGGAATTTGGCTGAAATTCCAGGAAC  150

seq1  CATCTCGGCCACTATGACCTTATGAATGAGAGCAG-AAGAGCAAGAAGAT  197
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CATCTCGGCCACTATGACCTTATGAATGAGAGCAGAAAGAGCAAGAAGAT  200

seq1  GTAAGAAAAAAAATGAAGTAACTTTGTCTTTGAGGAGCTTCTTTGGACTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAAAAAAAATGAAGTAACTTTGTCTTTGAGGAGCTTCTTTGGACTG  250

seq1  TGTTCTTCACTGTCATATGCATATATTTCTCTCTCTCTCTCTCTCTCTCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTCACTGTCATATGCATATATTTCTCTCTCTCTCTCTCTCTCTCT  300

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCT------TTCTTCTTCTTCTTCTTC  341
      ||||||||||||||||||||||||||      ||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTCTTCTTCTTCTTCTTCTTC  350

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  400

seq1  CCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  450

seq1  TCTCTCTCTCTCTGGTGTACACATATGTATGTAGGCACTGTAACATGGTA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTGGTGTACACATATGTATGTAGGCACTGTAACATGGTA  500

seq1  TGTACACATGGTGGGGCAGAACAGGGCATTGGATAATCTACTCAATAACT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACATGGTGGGGCAGAACAGGGCATTGGATAATCTACTCAATAACT  550

seq1  TCCCACCTTATCTCTTTCTCTAAACATGGCCCTAATGAGATGTCCATTGG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCTTATCTCTTTCTCTAAACATGGCCCTAATGAGATGTCCATTGG  600

seq1  GCCCCAGAAGATGACCCCACTGGGTCCTAAACCTGCCCAGTGACAAGGTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGAAGATGACCCCACTGGGTCCTAAACCTGCCCAGTGACAAGGTT  650

seq1  ACAGGTATACAGAATTACATCTGGCTTCTGATGGGTGAATTC  683
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTATACAGAATTACATCTGGCTTCTGATGGGTGAATTC  692