BAC Information

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BAC

Clone NameB6Ng01-337E11
Chromosome2 (Build37)
Map Location 139,219,770 - 139,220,913
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC628103
Downstream geneC130053K05Rik, LOC100043792, 5430433G21Rik, Tasp1, LOC672103, LOC269365, Esf1, 2310003L22Rik, Sel1l2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337E11.bB6Ng01-337E11.g
ACCGA121954GA121955
length1,1721,143
definitionB6Ng01-337E11.b B6Ng01-337E11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatatctaatggcctagaaacacctaaagcaatg
ttcaacatccttaatcctcagggaaatgcaaatcaaaacaaccctgatat
tccacttcacaccagtctagatggctaagatcaaaatctcaggtggcagc
agatgctggtgaggatgtgaagaaagaggaacactcctccattgcttctg
agattgcaagctggtacaaccactctggaaatcagtatggaagttcctca
gcaaattggacatggtattacctgaggatcaagctataccacccctggac
atatacccaaaagattctccaacatataacaaggacacatgctccactat
gtccattgcagccttatatataatagccaggagctggaaagaacccatat
gtctttcaacagaggaatggatacagaaaatgtggtatatttatacaatg
gagtactactcagttattaaaaactatgaattcatgaaattcttaggcaa
atgaatggaacaagaaaatatcatcttgagtgaggtaatccagtcacaaa
actatacacatggtatgcactcactaataagttgatattagcccaaaagc
tcagaatacctaagaaacaattcacaaaccacacaaagctcaagaagaag
gaaaaccaagtgtggatgtttctatccttctgagaaggggaacaaaatac
tcacaggagcaaatacagaaacaaagtgtggagcagagactgaaggaaag
gccatccagagactgactggggacccatcctatatatagtcaccaaacct
agacactattatggatgccaagaagtgcatgctgacaggagtcttatata
gctgcctcctgagaggctctgccagagcctaaaaaatacagaggtggatg
ccatcaattggactgactatgaggttctctatggggtccccaatggagga
gttagagaaaggcctgaaggagctgaggcatttgggatctccagagaaag
acataatatcaactgccagactccccccaccccgccccagatctccaggg
actaaatcaacatcaggagtgcacatgacgaactatgcttccaaggtgca
tatgttgcaagatatgcttgtcgtcatcatgagaagaaccatggtcggtc
aagctgatgaactcatggttag
gaattcctaacacataattcaaccgaacaaaatgcctactggtcaataat
ttgacatgcagcaaaactagtattgaaaaaaagaaggcaaactgagaaca
ttctcaaataatgactgagaaaattcattaatatcatatactttaaaaga
actactgaaagaatcctttcaagtataaaacaacagatgtcctaagtaga
aagggaggaaagaaaaacaataggaatagttaagacatagtcacataaaa
attgattttgattaaaaaacacttaaaagtaacaaactgtattgtgattg
tagtacaggtcactatcatggcaatgtcagcaataattggtacagagaaa
ggagaaaatgaatcttaattattgcaattagaattaaagcagtcttaatt
gaagtaaatttggagcatgagccacattttaatgccttagagaatccatt
aaaataccaaaaggataatactaaaactataggattaaaatgatagataa
aaacatttaacacataataaactaggcagtcaaatgaagaacaaaaatgc
aaggggcactgaaagcaagtgacaaatatatatacagtcatacaatatta
atataaatgctctcaaattctaatcatatggcaaagtctgcagacagacg
agaaagcatgcttatatgatgtgttatctataggatacaacccttagata
tagaatcatattaaaaatagagatgttccataaattgtagcaataaaaat
accagataaactcactttaaggtaaggggtattattagaaataataaaag
ggacttcttgttgggaaatgattatctatcaataatgtacaataatattg
tgctgagtgtgagtagcacttggctataattgtagcagcttaaaagactg
aggcagacagattgtgagtttgaggctagttggagtggcattgtaatgta
tgaggcagcctagctatatactaagattttatctccaatagaaagtaaaa
taaataaaaacgtttatgtacattataggtatatacccccactaacatga
tttttggatatacgaaactgaataaaaaacattacctggcctacctaaat
ttagaacttagctaagatgtccatgtctatctcttaatggagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_139219770_139220913
seq2: B6Ng01-337E11.g_64_1206 (reverse)

seq1  GCTCCATAAAAGAGATAAACATGGACATCTTTGCCTAATGTCTAAAATTT  50
      |||||||  |||||||| ||||||||||||| | ||||  |||||| || 
seq2  GCTCCAT-TAAGAGATAGACATGGACATCTTAG-CTAAGTTCTAAATTTA  48

seq1  AGTAG--CAAGTATTGTTTTT--ATCAGTTTCGTATAT-CAAAAATCATG  95
       ||||  || ||| |||||||   |||||||||||||| |||||||||||
seq2  GGTAGGCCAGGTAATGTTTTTTATTCAGTTTCGTATATCCAAAAATCATG  98

seq1  TTAGT-GGGGTATATAACTATAAATTGTTACATAAACGTTTTTATTTATT  144
      ||||| |||||||||| ||||||  || ||||||||||||||||||||||
seq2  TTAGTGGGGGTATATACCTATAA--TG-TACATAAACGTTTTTATTTATT  145

seq1  TTACTTTCTATTTGGAGATAAAATCTTAGTATATAGCCTAGGCTGCCTCA  194
      |||||||||| ||||||||||||||||||||||||| |||||||||||||
seq2  TTACTTTCTA-TTGGAGATAAAATCTTAGTATATAG-CTAGGCTGCCTCA  193

seq1  TACATTACAATGCCACTCCAACTAGCCTCAAACTCACAATCTGTCTGCCT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTACAATGCCACTCCAACTAGCCTCAAACTCACAATCTGTCTGCCT  243

seq1  CAGTCTTTTAAGCTGCTACAATTATAGCCAAGTGCTACTCACACTCAGCA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTTAAGCTGCTACAATTATAGCCAAGTGCTACTCACACTCAGCA  293

seq1  CAATATTATTGTACATTATTGATAGATAATCATTTCCCAACAAGAAGTCC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTATTGTACATTATTGATAGATAATCATTTCCCAACAAGAAGTCC  343

seq1  CTTTTATTATTTCTAATAATACCCCTTACCTTAAAGTGAGTTTATCTGGT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTATTTCTAATAATACCCCTTACCTTAAAGTGAGTTTATCTGGT  393

seq1  ATTTTTATTGCTACAATTTATGGAACATCTCTATTTTTAATATGATTCTA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTGCTACAATTTATGGAACATCTCTATTTTTAATATGATTCTA  443

seq1  TATCTAAGGGTTGTATCCTATAGATAACACATCATATAAGCATGCTTTCT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAGGGTTGTATCCTATAGATAACACATCATATAAGCATGCTTTCT  493

seq1  CGTCTGTCTGCAGACTTTGCCATATGATTAGAATTTGAGAGCATTTATAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTGTCTGCAGACTTTGCCATATGATTAGAATTTGAGAGCATTTATAT  543

seq1  TAATATTGTATGACTGTATATATATTTGTCACTTGCTTTCAGTGCCCCTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTGTATGACTGTATATATATTTGTCACTTGCTTTCAGTGCCCCTT  593

seq1  GCATTTTTGTTCTTCATTTGACTGCCTAGTTTATTATGTGTTAAATGTTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTGTTCTTCATTTGACTGCCTAGTTTATTATGTGTTAAATGTTT  643

seq1  TTATCTATCATTTTAATCCTATAGTTTTAGTATTATCCTTTTGGTATTTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTATCATTTTAATCCTATAGTTTTAGTATTATCCTTTTGGTATTTT  693

seq1  AATGGATTCTCTAAGGCATTAAAATGTGGCTCATGCTCCAAATTTACTTC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATTCTCTAAGGCATTAAAATGTGGCTCATGCTCCAAATTTACTTC  743

seq1  AATTAAGACTGCTTTAATTCTAATTGCAATAATTAAGATTCATTTTCTCC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGACTGCTTTAATTCTAATTGCAATAATTAAGATTCATTTTCTCC  793

seq1  TTTCTCTGTACCAATTATTGCTGACATTGCCATGATAGTGACCTGTACTA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGTACCAATTATTGCTGACATTGCCATGATAGTGACCTGTACTA  843

seq1  CAATCACAATACAGTTTGTTACTTTTAAGTGTTTTTTAATCAAAATCAAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACAATACAGTTTGTTACTTTTAAGTGTTTTTTAATCAAAATCAAT  893

seq1  TTTTATGTGACTATGTCTTAACTATTCCTATTGTTTTTCTTTCCTCCCTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTGACTATGTCTTAACTATTCCTATTGTTTTTCTTTCCTCCCTT  943

seq1  TCTACTTAGGACATCTGTTGTTTTATACTTGAAAGGATTCTTTCAGTAGT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTAGGACATCTGTTGTTTTATACTTGAAAGGATTCTTTCAGTAGT  993

seq1  TCTTTTAAAGTATATGATATTAATGAATTTTCTCAGTCATTATTTGAGAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAAAGTATATGATATTAATGAATTTTCTCAGTCATTATTTGAGAA  1043

seq1  TGTTCTCAGTTTGCCTTCTTTTTTTCAATACTAGTTTTGCTGCATGTCAA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCAGTTTGCCTTCTTTTTTTCAATACTAGTTTTGCTGCATGTCAA  1093

seq1  ATTATTGACCAGTAGGCATTTTGTTCGGTTGAATTATGTGTTAGGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGACCAGTAGGCATTTTGTTCGGTTGAATTATGTGTTAGGAATTC  1143