BAC Information

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BAC

Clone NameB6Ng01-337L06
Chromosome2 (Build37)
Map Location 110,926,929 - 111,059,196
singlet/doubletdoublet
Overlap geneLOC668802, LOC623270, LOC623301, 4930430A15Rik
Upstream geneLOC668797, Bbox1, 1110018M03Rik, LOC668799, Slc5a12, Muc15
Downstream geneOlfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337L06.bB6Ng01-337L06.g
ACCGA122246GA122247
length1,1311,134
definitionB6Ng01-337L06.b B6Ng01-337L06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,058,053 - 111,059,196)(110,926,929 - 110,928,068)
sequence
gaattctttaaagacagagtaaatgaggtgaggagcattaatttgcattc
attcctttctgctcttgatggcggatatgctacaactactgcctccaact
tcctgcaaaaatattataccattgtgagtgaaaataaacacttttccccc
taattttcttttgacaggatactttatcacagcactagaacaaaaaaaaa
aaggatttcatgatttctggacagctataatatatgattatatgaaagtg
gaagaaaataacacattgggtttttttgttgattattatgataatgcctt
ttaacattctggaaaatttaacctggtaatttttttaaatagtaatttta
cagtttttgtttttgttttgcacatggcagtagtcgagagattcttatga
actatgatgaaatgttacgtagaaaaaataaagatggcattccaggtaag
gcttatgataatgataagtgaatattaaactcatgatcagtacacattca
atgcaaactaacacttttattacttgtgttctaagcatatataattgaac
tgcttcacatatttttaaatattttattttggcaatagcacaaacatttt
gttgttgtgattttgttatcactcaccaaagctgtctcttgttataagag
aaatagtgacattgctgaataaatatatttttgtctatgtccagacatga
ttcagttatcctgcactgactgccaccttattgtgtaattgaaatttgtt
ttgaactccagatttaagctgctctgatttcttagttgttgaggttagac
acatgtagcacatagtcagcaacttcctttactaaaatatgtaacatttt
ttggaactagggattgaacccagaactgcatgccttctattattattatt
atatattattatattatattatatatatttattacactccagattttatt
cccctcctgattcatcctctgactgttcacatccataactcctcccccac
cccatgtctcacaagggtgacccctcaccctacagacttctaactcccag
ggacctccagttctcttgagggttagtgaatcttctctgactgaaccgga
ctaagcaaggccctctgctgtatattgtgtt
gaattccattctagcaagcaacttccttttgtaattcgccaaatggtgta
gtattacaacaaaattttcttgaaacatgctattaaagtggatgttacaa
gcacattttaattgtgcaataatgagtccactatatattgacactcatct
ttaaatgttcatgtactatatttttatatggatataataatttaatttct
tattgatgattattttaagtacaactctaaaacttgatgatgcttaaaga
aatatccttgttttgtgtacatgtacctacatatacaatcaaagtcgtat
attaaatattcttcaattaagtttaatatgcatcacatgtcaacttttct
actaagactaacatacataatatatattagcagcatgtgtgtgtttgtgt
ttaagagtaatgtttttctattataaaataacccatttccaaaagttaaa
ttgttagaactaaaaagtaatatttttgaaatatgtctatcactgctact
aaatcatgattcaatattgatatacacactagtttgtaaataatttttcc
ttaaatctgacagcttttcttattattttttaaacaaaatgaatcaatat
taattgaaaacaattgtacctaattttattatttatgtttaaatattttg
ctatggtggctggttggttggttggtttttggctgtccattcaagattat
accctagataaaccacatttattagttatgcaaattctcagagattataa
tttatttaaaaggtggacataataactagtatcaaatctttctggtctta
cccatcatgctcctctgcttcctcggtaggatattgctgcttttcctcct
ccacatactttctttgtagactgagtcttccttttgcatcagcagcacca
ccagcagcaacagaaacagcaatggtgcagcagtagggatgtcagagaaa
ctacagctgcagtagcgacgtagcatctgtgggaacagcacagcaacagc
agcagctgcagctgcagcagcgctacagcagtgaggctgcagcatggagt
agccactgcagcagccagcgccagtagcagcagccaacagaagaaggcct
gcactaagcctggatcgcaggaggaactgcagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111058053_111059196
seq2: B6Ng01-337L06.b_48_1178 (reverse)

seq1  AACAC-ATATACAGCAGAGG--CCTGCTGGGTCTGGGTTCAGTCAGAGAA  47
      ||||| ||||||||||||||  | ||||  |||  |||||||||||||||
seq2  AACACAATATACAGCAGAGGGCCTTGCTTAGTC-CGGTTCAGTCAGAGAA  49

seq1  GATTCACCTAACCCTCAAGAG-ACTGGAGGTCCCTGGGAGTTTAGAAGTC  96
      |||||| |||||||||||||| |||||||||||||||||| |||||||||
seq2  GATTCA-CTAACCCTCAAGAGAACTGGAGGTCCCTGGGAG-TTAGAAGTC  97

seq1  TGGTAGGGTGAGGGGGTCACCCTTGTGGAGACATGGGGGTGGGGAGGAGT  146
      | ||||||||| |||||||||||||| |||||||||||  ||||||||||
seq2  T-GTAGGGTGA-GGGGTCACCCTTGT-GAGACATGGGGTGGGGGAGGAGT  144

seq1  TATGGGATGTGGAACAGTCAGAGGATGAATCAGGAGGGGAATAAAATCTG  196
      ||| |||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAT-GGATGT-GAACAGTCAGAGGATGAATCAGGAGGGGAATAAAATCTG  192

seq1  GAGTGTAAATAAAATAATAATAATAATAATAATAATAATAATAATAATAA  246
      ||||||||  || |||      ||||| ||||| |||||||||   ||||
seq2  GAGTGTAATAAATATA-----TATAAT-ATAAT-ATAATAATA--TATAA  233

seq1  TAATAATAATAGAAGGCATGCAGTTCTGGGTTCAATCCCTAGTTCCAAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAATAGAAGGCATGCAGTTCTGGGTTCAATCCCTAGTTCCAAAA  283

seq1  AATGTTACATATTTTAGTAAAGGAAGTTGCTGACTATGTGCTACATGTGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTACATATTTTAGTAAAGGAAGTTGCTGACTATGTGCTACATGTGT  333

seq1  CTAACCTCAACAACTAAGAAATCAGAGCAGCTTAAATCTGGAGTTCAAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCTCAACAACTAAGAAATCAGAGCAGCTTAAATCTGGAGTTCAAAA  383

seq1  CAAATTTCAATTACACAATAAGGTGGCAGTCAGTGCAGGATAACTGAATC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTCAATTACACAATAAGGTGGCAGTCAGTGCAGGATAACTGAATC  433

seq1  ATGTCTGGACATAGACAAAAATATATTTATTCAGCAATGTCACTATTTCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGGACATAGACAAAAATATATTTATTCAGCAATGTCACTATTTCT  483

seq1  CTTATAACAAGAGACAGCTTTGGTGAGTGATAACAAAATCACAACAACAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAACAAGAGACAGCTTTGGTGAGTGATAACAAAATCACAACAACAA  533

seq1  AATGTTTGTGCTATTGCCAAAATAAAATATTTAAAAATATGTGAAGCAGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTGTGCTATTGCCAAAATAAAATATTTAAAAATATGTGAAGCAGT  583

seq1  TCAATTATATATGCTTAGAACACAAGTAATAAAAGTGTTAGTTTGCATTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTATATATGCTTAGAACACAAGTAATAAAAGTGTTAGTTTGCATTG  633

seq1  AATGTGTACTGATCATGAGTTTAATATTCACTTATCATTATCATAAGCCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTACTGATCATGAGTTTAATATTCACTTATCATTATCATAAGCCT  683

seq1  TACCTGGAATGCCATCTTTATTTTTTCTACGTAACATTTCATCATAGTTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGAATGCCATCTTTATTTTTTCTACGTAACATTTCATCATAGTTC  733

seq1  ATAAGAATCTCTCGACTACTGCCATGTGCAAAACAAAAACAAAAACTGTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAATCTCTCGACTACTGCCATGTGCAAAACAAAAACAAAAACTGTA  783

seq1  AAATTACTATTTAAAAAAATTACCAGGTTAAATTTTCCAGAATGTTAAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACTATTTAAAAAAATTACCAGGTTAAATTTTCCAGAATGTTAAAA  833

seq1  GGCATTATCATAATAATCAACAAAAAAACCCAATGTGTTATTTTCTTCCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTATCATAATAATCAACAAAAAAACCCAATGTGTTATTTTCTTCCA  883

seq1  CTTTCATATAATCATATATTATAGCTGTCCAGAAATCATGAAATCCTTTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATATAATCATATATTATAGCTGTCCAGAAATCATGAAATCCTTTT  933

seq1  TTTTTTTGTTCTAGTGCTGTGATAAAGTATCCTGTCAAAAGAAAATTAGG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGTTCTAGTGCTGTGATAAAGTATCCTGTCAAAAGAAAATTAGG  983

seq1  GGGAAAAGTGTTTATTTTCACTCACAATGGTATAATATTTTTGCAGGAAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAGTGTTTATTTTCACTCACAATGGTATAATATTTTTGCAGGAAG  1033

seq1  TTGGAGGCAGTAGTTGTAGCATATCCGCCATCAAGAGCAGAAAGGAATGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGCAGTAGTTGTAGCATATCCGCCATCAAGAGCAGAAAGGAATGA  1083

seq1  ATGCAAATTAATGCTCCTCACCTCATTTACTCTGTCTTTAAAGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAATTAATGCTCCTCACCTCATTTACTCTGTCTTTAAAGAATTC  1131

seq1: chr2_110926929_110928068
seq2: B6Ng01-337L06.g_64_1197

seq1  GAATTCCATTCTAGCAAGCAACTTCCTTTTGTAATTCGCCAAATGGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCTAGCAAGCAACTTCCTTTTGTAATTCGCCAAATGGTGTA  50

seq1  GTATTACAACAAAATTTTCTTGAAACATGCTATTAAAGTGGATGTTACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTACAACAAAATTTTCTTGAAACATGCTATTAAAGTGGATGTTACAA  100

seq1  GCACATTTTAATTGTGCAATAATGAGTCCACTATATATTGACACTCATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTTTAATTGTGCAATAATGAGTCCACTATATATTGACACTCATCT  150

seq1  TTAAATGTTCATGTACTATATTTTTATATGGATATAATAATTTAATTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGTTCATGTACTATATTTTTATATGGATATAATAATTTAATTTCT  200

seq1  TATTGATGATTATTTTAAGTACAACTCTAAAACTTGATGATGCTTAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATGATTATTTTAAGTACAACTCTAAAACTTGATGATGCTTAAAGA  250

seq1  AATATCCTTGTTTTGTGTACATGTACCTACATATACAATCAAAGTCGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCTTGTTTTGTGTACATGTACCTACATATACAATCAAAGTCGTAT  300

seq1  ATTAAATATTCTTCAATTAAGTTTAATATGCATCACATGTCAACTTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATATTCTTCAATTAAGTTTAATATGCATCACATGTCAACTTTTCT  350

seq1  ACTAAGACTAACATACATAATATATATTAGCAGCATGTGTGTGTTTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGACTAACATACATAATATATATTAGCAGCATGTGTGTGTTTGTGT  400

seq1  TTAAGAGTAATGTTTTTCTATTATAAAATAACCCATTTCCAAAAGTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGTAATGTTTTTCTATTATAAAATAACCCATTTCCAAAAGTTAAA  450

seq1  TTGTTAGAACTAAAAAGTAATATTTTTGAAATATGTCTATCACTGCTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGAACTAAAAAGTAATATTTTTGAAATATGTCTATCACTGCTACT  500

seq1  AAATCATGATTCAATATTGATATACACACTAGTTTGTAAATAATTTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATGATTCAATATTGATATACACACTAGTTTGTAAATAATTTTTCC  550

seq1  TTAAATCTGACAGCTTTTCTTATTATTTTTTAAACAAAATGAATCAATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCTGACAGCTTTTCTTATTATTTTTTAAACAAAATGAATCAATAT  600

seq1  TAATTGAAAACAATTGTACCTAATTTTATTATTTATGTTTAAATATTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAAAACAATTGTACCTAATTTTATTATTTATGTTTAAATATTTTG  650

seq1  CTATGGTGGCTGGTTGGTTGGTTGGTTTTTGGCTGTCCATTCAAGATTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGTGGCTGGTTGGTTGGTTGGTTTTTGGCTGTCCATTCAAGATTAT  700

seq1  ACCCTAGATAAACCACATTTATTAGTTATGCAAATTCTCAGAGATTATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAGATAAACCACATTTATTAGTTATGCAAATTCTCAGAGATTATAA  750

seq1  TTTATTTAAAAGGTGGACATAATAACTAGTATCAAATCTTTCTGGTCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAAAAGGTGGACATAATAACTAGTATCAAATCTTTCTGGTCTTA  800

seq1  CCCATCATGCTCCTCTGCTTCCTCGGTAGGATATTGCTGCTTTTCCTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCATGCTCCTCTGCTTCCTCGGTAGGATATTGCTGCTTTTCCTCCT  850

seq1  CCACATACTTTCTTTGTAGACTGAGTCTTCCTTTTGCATCAGCAGCACCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATACTTTCTTTGTAGACTGAGTCTTCCTTTTGCATCAGCAGCACCA  900

seq1  CCAGCAGCAACAGAAACAGCAATGGGTGCAGCAGTAGGGATGTCAGAAGA  950
      ||||||||||||||||||||||| |||||||||||||||||||||| |||
seq2  CCAGCAGCAACAGAAACAGCAAT-GGTGCAGCAGTAGGGATGTCAG-AGA  948

seq1  AACTACAGCTGCAGTAGCGGACGTAGCATCTGTGGGAACAGCAACAGCAA  1000
      |||||||||||||||||| ||||||||||||||||||||||| |||||||
seq2  AACTACAGCTGCAGTAGC-GACGTAGCATCTGTGGGAACAGC-ACAGCAA  996

seq1  CAGCAGCAGCTGCAGCTGCAGCAGCGGCTACAGCAGGTGAAGCTGCAGCA  1050
      ||||||||||||||||||||||||| ||||||||| |||| |||||||||
seq2  CAGCAGCAGCTGCAGCTGCAGCAGC-GCTACAGCA-GTGAGGCTGCAGCA  1044

seq1  T-GAGTAGCAACTGCAGCAG-CAGCCGCAGTAGCAGCAG-CAACAGAAGA  1097
      | ||||||| |||||||||| ||||  |||||||||||| ||||||||||
seq2  TGGAGTAGCCACTGCAGCAGCCAGCGCCAGTAGCAGCAGCCAACAGAAGA  1094

seq1  AGGGGCTGCAGCTAACGCTGGAGCAGCAGGAGGAACAGCAGCA  1140
      | || ||||| ||||  ||||| | ||||||||||| ||||||
seq2  A-GGCCTGCA-CTAAGCCTGGATC-GCAGGAGGAACTGCAGCA  1134