BAC Information

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BAC

Clone NameB6Ng01-337P13
Chromosome2 (Build37)
Map Location 137,915,690 - 137,916,804
singlet/doubletsinglet
Overlap genenone
Upstream geneJag1
Downstream geneBtbd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337P13.bB6Ng01-337P13.g
ACCGA122421GA122422
length1,1131,165
definitionB6Ng01-337P13.b B6Ng01-337P13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggaatatttcacaactgcattcaaaggttaaggctctaaata
tatcaacttattgcctatgttttccagtctttttcctttttgtttttgtt
tttttttgttgttgttgtttttttacaatggtttcagttctgggagaaat
acatatatgtttctaatttgattataccttcaacaagttccctttgcctt
taaaagaagcacgttgagtcttgagcagctctggatagctcataatatct
acagtttcacatctagacctgtgccatgttaccctgtgggcctctttagt
tgtgtcagtgagccttgccttccatttgttgatgttaatgctgttcttat
attttgatttaattttccccattctgtttccacttgttattttaaatgtt
ctttgcaaatgatcctggctgtgtttagttaagagatatattgtctgtct
cttttatgataggaactttttgttttacattttattcagtgacagactga
ttctgaagtgttgtttttattttatttcagatctgtggcagcatgagtta
tctttttttcttttttcttgttctgcttttcttgtttactctcttttccc
ctttgcaaaaaatggaatcatgtcttcccaattgacactgaagttaattt
gtgtacaatttgtgtactcttgatctaaataatgagatactaggcatctg
cttttcattaaagaagggatcagctggccagcaaagactcatgaccccca
ggctgactcttggaatctttcccagtgattccacattagagaagtagagg
atgaagttccgttagttatcccctgactctgcatgcttgctatggcttac
ctgtaaacctctactcccccaatgcacaaatcatgcttaaagggaaagtt
taccaccctaaaagaatttatcattatttacttcctatttttcgatgtcc
aatagcatgagattaaagaaaacctacttcactatcctcacctccttcct
taatttgactaagggaaaggtggaaacatctactagtgttcagtgatcac
tcctcaaggctagatgaccatacaccacatatcatcctctctggggctct
gtctcagctctct

gaattcatatgtacaactgtactgctgtcacatatgtgcagaaaacacaa
tttctgtgtagccacccactgcatatggccttataatctcctccaccctc
cttttacaatggtccctgaactgtgtgtgtgtgtgggtattgtatggatg
gcccatttaaagctgtgcattcttcagccacctgatcagttgtggctctc
tgtgttggtcactacctgctacaaagagaggacttctctaatgaggatgc
agaaatgtactaatttatagatataacgacaagttcttaggaaaaggttt
tattctgtttcccataagcacactaataggaggttctcccccagtgatca
gtctaaccatgggttcttggcccaaatatctacgccagctatggaatctg
tcctgtggaatggggtttaaatctaaacagaaagtggtttgtgactccaa
tgacgtttttgttatttttatagcaatgagcatattgtaccaggtaggct
gttactactttattctctatgagattcaaggtatcagatcttatgttgaa
gtcagtgatctttttaaatttgattgttgtacagggtaaaatacaaggag
ttggttttattttctgcattccttattattaagtttgaacattactattt
gctgaagatgatgtcttttatctagtgtatattttgacctcattgtaaat
aatcaagtagcctcagatgtgtggacttatatgtaggccctcaattctat
tctatgattggacatgcctgcttttatgcctatactagtctgtttttttt
ttaactactataattttgtagtataactagaaatctggggatagtaatac
cttccagcagtttcagagattccattaaaggtcaagaaaagataaatatg
ttccattcttcctgtttcaacctagtaatttggaatattagagaaattag
gacaaacttaaaggagatacagttaaagaaaagagttcaaaatattttct
aattttaccattatggatatggattatatacataaaaagaaccgtatgat
tccatcttgaaaagtcttacaggcttttaaacacagtccacaataaccga
gaattccagatttacacaaaatggtgagcttagcaaattcctagtgtacc
tattatgtggcaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_137915690_137916804
seq2: B6Ng01-337P13.b_47_1159 (reverse)

seq1  AGAGAGACAGAGACAGAGACACAGAGA-GATGAACAATGT-GTGTATGGT  48
      |||||| | ||||||||| | |||||| |||||   |||| |||||||||
seq2  AGAGAG-CTGAGACAGAGCCCCAGAGAGGATGA--TATGTGGTGTATGGT  47

seq1  CATCTAGCCTTGGAGAGGTGATCACTGAACACTAGTAGAATGTTTCCACC  98
      ||||||||||| |||  ||||||||||||||||||||| |||||||||||
seq2  CATCTAGCCTT-GAGGAGTGATCACTGAACACTAGTAG-ATGTTTCCACC  95

seq1  TTT-CCTTAGTCAAATTAAGGAAGGAGGTGAGGATAGTGAAGTAGGTTTT  147
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTAGTCAAATTAAGGAAGGAGGTGAGGATAGTGAAGTAGGTTTT  145

seq1  CTTTAATCTCATGCTATTGGACATCGAAAAATAGGAAGTAAATAATGATA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCTCATGCTATTGGACATCGAAAAATAGGAAGTAAATAATGATA  195

seq1  AATTCTTTTAGGGTGGTAAACTTTCCCTTTAAGCATGATTTGTGCATTGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTTTAGGGTGGTAAACTTTCCCTTTAAGCATGATTTGTGCATTGG  245

seq1  GGGAGTAGAGGTTTACAGGTAAGCCATAGCAAGCATGCAGAGTCAGGGGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTAGAGGTTTACAGGTAAGCCATAGCAAGCATGCAGAGTCAGGGGA  295

seq1  TAACTAACGGAACTTCATCCTCTACTTCTCTAATGTGGAATCACTGGGAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAACGGAACTTCATCCTCTACTTCTCTAATGTGGAATCACTGGGAA  345

seq1  AGATTCCAAGAGTCAGCCTGGGGGTCATGAGTCTTTGCTGGCCAGCTGAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCAAGAGTCAGCCTGGGGGTCATGAGTCTTTGCTGGCCAGCTGAT  395

seq1  CCCTTCTTTAATGAAAAGCAGATGCCTAGTATCTCATTATTTAGATCAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTTTAATGAAAAGCAGATGCCTAGTATCTCATTATTTAGATCAAG  445

seq1  AGTACACAAATTGTACACAAATTAACTTCAGTGTCAATTGGGAAGACATG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACAAATTGTACACAAATTAACTTCAGTGTCAATTGGGAAGACATG  495

seq1  ATTCCATTTTTTGCAAAGGGGAAAAGAGAGTAAACAAGAAAAGCAGAACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATTTTTTGCAAAGGGGAAAAGAGAGTAAACAAGAAAAGCAGAACA  545

seq1  AGAAAAAAGAAAAAAAGATAACTCATGCTGCCACAGATCTGAAATAAAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAGAAAAAAAGATAACTCATGCTGCCACAGATCTGAAATAAAAT  595

seq1  AAAAACAACACTTCAGAATCAGTCTGTCACTGAATAAAATGTAAAACAAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAACACTTCAGAATCAGTCTGTCACTGAATAAAATGTAAAACAAA  645

seq1  AAGTTCCTATCATAAAAGAGACAGACAATATATCTCTTAACTAAACACAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCTATCATAAAAGAGACAGACAATATATCTCTTAACTAAACACAG  695

seq1  CCAGGATCATTTGCAAAGAACATTTAAAATAACAAGTGGAAACAGAATGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATCATTTGCAAAGAACATTTAAAATAACAAGTGGAAACAGAATGG  745

seq1  GGAAAATTAAATCAAAATATAAGAACAGCATTAACATCAACAAATGGAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATTAAATCAAAATATAAGAACAGCATTAACATCAACAAATGGAAG  795

seq1  GCAAGGCTCACTGACACAACTAAAGAGGCCCACAGGGTAACATGGCACAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGCTCACTGACACAACTAAAGAGGCCCACAGGGTAACATGGCACAG  845

seq1  GTCTAGATGTGAAACTGTAGATATTATGAGCTATCCAGAGCTGCTCAAGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGATGTGAAACTGTAGATATTATGAGCTATCCAGAGCTGCTCAAGA  895

seq1  CTCAACGTGCTTCTTTTAAAGGCAAAGGGAACTTGTTGAAGGTATAATCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACGTGCTTCTTTTAAAGGCAAAGGGAACTTGTTGAAGGTATAATCA  945

seq1  AATTAGAAACATATATGTATTTCTCCCAGAACTGAAACCATTGTAAAAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAAACATATATGTATTTCTCCCAGAACTGAAACCATTGTAAAAAA  995

seq1  ACAACAACAACAAAAAAAAACAAAAACAAAAAGGAAAAAGACTGGAAAAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACAACAAAAAAAAACAAAAACAAAAAGGAAAAAGACTGGAAAAC  1045

seq1  ATAGGCAATAAGTTGATATATTTAGAGCCTTAACCTTTGAATGCAGTTGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCAATAAGTTGATATATTTAGAGCCTTAACCTTTGAATGCAGTTGT  1095

seq1  GAAATATTCCTGGAATTC  1115
      ||||||||||||||||||
seq2  GAAATATTCCTGGAATTC  1113


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