BAC Information

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BAC

Clone NameB6Ng01-338J17
Chromosome2 (Build37)
Map Location 99,315,941 - 99,316,576
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042886
Downstream geneLOC621386, LOC668702, LOC100042907, LOC241572
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338J17.bB6Ng01-338J17.g
ACCGA122853GA122854
length1,024740
definitionB6Ng01-338J17.b B6Ng01-338J17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaagaaaatatataggcttgtttgtagataagtggtttatccc
ttccctaaaacacttttaaatatatataaaaactgccttaaaatataatg
aaaaaaaattaatgaacaaatctacataatgacaattctttctcgagaca
tatggagtttcatttgaacactctggttctgtagacttttgtctctctgt
actcttgtccagatgcacgaacagctggtgctcagcctcctaggatagtc
tggccataaaccagtcctaggctgtcagagagtgaggccagtcttgcata
atgtgtgaaaaaaggaagaagatctgatacatgggtgggagagtaccaca
gaagcacagaagccatgacctaatgtcaagtgttgccactgatatacaga
acctcttatagatgccttagatttgtgagtttaacttggagtccttgttc
tatcaggacactagaaaaggcttactggcagaaaagggaaatcaatgttt
taagggaggatttcaaggaacacaggtggtacacagcataaaaggaaaat
aatggggtatgtttcattggggaaggtatagaaagacagagcagaacact
ggatgggaaaaggagtaacactaaggattttgaagaagccatgaggaagc
atattattttataaattccaactcctctatattatattttcatatgagaa
tttaattggagttaccctacacaaagtttgccagttaaaaagtacaacac
taggtgtgagacatgtccactgaagttgttggtcatggcaatctcagcta
ctctccaaataatacagattattgccatagttctttgattgcccccagag
ctagataggaagattaatacttatgaggctgcaataaactttgggtcaaa
agaattatcaagaaagcaagggagttacttatcaggatgcatcctcccta
ctttctagatttaatttgtaaagttatttaatcaaggtgaggtgaaaact
tacatgggaggttattttatccag
gaattctctgtttagcgtttaccccattttaattgtggggtttttttagg
ttaactttttgagatttttatatattttggaattaatccctctgtaggat
gtagggttagtgaagagtttttcctgatatgtaggttgctgatttgtcct
attggtggtgtcttttgacttacagaaacttttcagttttgtgaggtccc
acttatcaattattaatcttaaagtctgagccactagtgtcatgttaagg
aaatttcctcttatgccagtcagttctagactctttcctactttctcttg
tattagattcagtgtatctggttttatgttgagatccttgatccacttgg
actgaagatcagtgcagtgtgataaatactgttatatttttattctccta
cctacaaactgctagttagaccagtatcatttgtttgaagatgctttttc
tttcactgtatggttttggcttctttgtcaaagatcaagtgaccttatgt
gtgtggcattatttctaggtctacaattctactccattaatctacctgtt
gtttttctaaccaatactatttagtgtttattaatattgcttttgtaata
cagtcccaggtcaggagtggtgattcccccagatgtgcttttatttgttg
agaatggtttttggttattttggaattttttgtttatccaaatgatgttg
agaatttctctttctatctctgtgaagaattgagtgagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_99315941_99316576
seq2: B6Ng01-338J17.b_45_680 (reverse)

seq1  TCTTCAAAATCCTTAGTGTTACTCCTTTTCCCATCCAGTGTTCTGCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAAATCCTTAGTGTTACTCCTTTTCCCATCCAGTGTTCTGCTCTG  50

seq1  TCTTTCTATACCTTCCCCAATGAAACATACCCCATTATTTTCCTTTTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTATACCTTCCCCAATGAAACATACCCCATTATTTTCCTTTTATG  100

seq1  CTGTGTACCACCTGTGTTCCTTGAAATCCTCCCTTAAAACATTGATTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTACCACCTGTGTTCCTTGAAATCCTCCCTTAAAACATTGATTTCC  150

seq1  CTTTTCTGCCAGTAAGCCTTTTCTAGTGTCCTGATAGAACAAGGACTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGCCAGTAAGCCTTTTCTAGTGTCCTGATAGAACAAGGACTCCA  200

seq1  AGTTAAACTCACAAATCTAAGGCATCTATAAGAGGTTCTGTATATCAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAACTCACAAATCTAAGGCATCTATAAGAGGTTCTGTATATCAGTG  250

seq1  GCAACACTTGACATTAGGTCATGGCTTCTGTGCTTCTGTGGTACTCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACACTTGACATTAGGTCATGGCTTCTGTGCTTCTGTGGTACTCTCCC  300

seq1  ACCCATGTATCAGATCTTCTTCCTTTTTTCACACATTATGCAAGACTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGTATCAGATCTTCTTCCTTTTTTCACACATTATGCAAGACTGGC  350

seq1  CTCACTCTCTGACAGCCTAGGACTGGTTTATGGCCAGACTATCCTAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCTCTGACAGCCTAGGACTGGTTTATGGCCAGACTATCCTAGGAG  400

seq1  GCTGAGCACCAGCTGTTCGTGCATCTGGACAAGAGTACAGAGAGACAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCACCAGCTGTTCGTGCATCTGGACAAGAGTACAGAGAGACAAAA  450

seq1  GTCTACAGAACCAGAGTGTTCAAATGAAACTCCATATGTCTCGAGAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACAGAACCAGAGTGTTCAAATGAAACTCCATATGTCTCGAGAAAGA  500

seq1  ATTGTCATTATGTAGATTTGTTCATTAATTTTTTTTCATTATATTTTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCATTATGTAGATTTGTTCATTAATTTTTTTTCATTATATTTTAAG  550

seq1  GCAGTTTTTATATATATTTAAAAGTGTTTTAGGGAAGGGATAAACCACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTTTATATATATTTAAAAGTGTTTTAGGGAAGGGATAAACCACTT  600

seq1  ATCTACAAACAAGCCTATATATTTTCTTTGGAATTC  636
      ||||||||||||||||||||||||||||||||||||
seq2  ATCTACAAACAAGCCTATATATTTTCTTTGGAATTC  636