BAC Information

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BAC

Clone NameB6Ng01-338N04
Chromosome2 (Build37)
Map Location 134,370,583 - 134,371,832
singlet/doubletsinglet
Overlap geneHao1
Upstream geneBmp2
Downstream geneTxndc13, LOC627897, LOC433478, Plcb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338N04.bB6Ng01-338N04.g
ACCGA122996GA122997
length1,246244
definitionB6Ng01-338N04.b B6Ng01-338N04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaataccccagtcacccacagcatcctctcaagggccccctcct
tttcctgccaaagaaaatcattaccccacacctaaatgcacaagccttgc
caaattcacagaccacgcccacatgcacgaaccaagcaatagcctgatta
attctaataataaagagaacaacgcaccatagaagatcgtgagaacacag
acggaaactggaagaatgcagaggtccttgagggagttctcttgtataca
gctgtattatagcttgagatgctatgactcagatgttttggattcttgaa
gacagggatctccccgaccctatttcttatgccctttccacttcattcaa
aggtagagtgtatgtgtcactgtcccagagtcctcctttgtacaaatcta
aagctataaacgcctgcctgctggtgctataactccttcagagcattttc
aaagcagcacgcggtagttaggagccacttttctggagacagactgctgg
gatctggacacttcctgtcacttatgaatcatgtagccctgagcaagtga
ctcatcttatatgtgcctcagtttttcatgtgtaaactaggcttagtaat
gtagttgcttctctgggttttctgagaacaccaaacgagagctgtggtgt
acttaggcaagtgcctagaaggtggcaattttgtgctaaataaatctaaa
agggtaagaactaatgggcacttaatatcagctcatggtgagtgcccggg
gacataacatttgatgactccctaacagtctctaaacaagcgttttcatt
ttactccagtccgtcctcaaacaaaatcacgggcttcagacccataggga
ggaagttagagcgtacagcgtgccatcagtggttatgaaagcagttctcg
aaaactctagaaatttgttcacaaaaccagacagtaatgccaagttccct
ggtcccgcagtgacttaccaggtgagctctgcccactggtaaacttgctt
ccctctgctctgtctctgagttgtttcctgatttttgctctctttcaaat
ctattttccatcacttgcttctggaacaatagttcaaatagagtttataa
ggatggctatacccagaagtaatcttcccactgcactttaaaaaactagt
gagtacaaaagcatctctcatcttcaaaacagtctcgtaacatggtctgc
cctaatagagaaacattgaacacctgtgtgcgctcatacttcaatt

aggcatcccagagggggaagagaaggggattgcaactgcatagggctggc
tagactacccagtgcttccacggactagaccaccaaccagggaatataca
tggagggatccatggctccagatacatcggcagcagtggatggccttatc
tgacatcgatgggaggggaggcccttggtcctacggaggttttatgctcc
agagtagggggatactggagtggtggggcaggagagggtgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_134370583_134371832
seq2: B6Ng01-338N04.b_47_1292

seq1  GAATTCAAATACCCCAGTCACCCACAGCATCCTCTCAAGGGCCCCCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATACCCCAGTCACCCACAGCATCCTCTCAAGGGCCCCCTCCT  50

seq1  TTTCCTGCCAAAGAAAATCATTACCCCACACCTAAATGCACAAGCCTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGCCAAAGAAAATCATTACCCCACACCTAAATGCACAAGCCTTGC  100

seq1  CAAATTCACAGACCACGCCCACATGCACGAACCAAGCAATAGCCTGATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCACAGACCACGCCCACATGCACGAACCAAGCAATAGCCTGATTA  150

seq1  ATTCTAATAATAAAGAGAACAACGCACCATAGAAGATCGTGAGAACACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAATAATAAAGAGAACAACGCACCATAGAAGATCGTGAGAACACAG  200

seq1  ACGGAAACTGGAAGAATGCAGAGGTCCTTGAGGGAGTTCTCTTGTATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAAACTGGAAGAATGCAGAGGTCCTTGAGGGAGTTCTCTTGTATACA  250

seq1  GCTGTATTATAGCTTGAGATGCTATGACTCAGATGTTTTGGATTCTTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATTATAGCTTGAGATGCTATGACTCAGATGTTTTGGATTCTTGAA  300

seq1  GACAGGGATCTCCCCGACCCTATTTCTTATGCCCTTTCCACTTCATTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGATCTCCCCGACCCTATTTCTTATGCCCTTTCCACTTCATTCAA  350

seq1  AGGTAGAGTGTATGTGTCACTGTCCCAGAGTCCTCCTTTGTACAAATCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGAGTGTATGTGTCACTGTCCCAGAGTCCTCCTTTGTACAAATCTA  400

seq1  AAGCTATAAACGCCTGCCTGCTGGTGCTATAACTCCTTCAGAGCATTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATAAACGCCTGCCTGCTGGTGCTATAACTCCTTCAGAGCATTTTC  450

seq1  AAAGCAGCACGCGGTAGTTAGGAGCCACTTTTCTGGAGACAGACTGCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGCACGCGGTAGTTAGGAGCCACTTTTCTGGAGACAGACTGCTGG  500

seq1  GATCTGGACACTTCCTGTCACTTATGAATCATGTAGCCCTGAGCAAGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGACACTTCCTGTCACTTATGAATCATGTAGCCCTGAGCAAGTGA  550

seq1  CTCATCTTATATGTGCCTCAGTTTTTCATGTGTAAACTAGGCTTAGTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTTATATGTGCCTCAGTTTTTCATGTGTAAACTAGGCTTAGTAAT  600

seq1  GTAGTTGCTTCTCTGGGTTTTCTGAGAACACCAAACGAGAGCTGTGGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTGCTTCTCTGGGTTTTCTGAGAACACCAAACGAGAGCTGTGGTGT  650

seq1  ACTTAGGCAAGTGCCTAGAAGGTGGCAATTTTGTGCTAAATAAATCTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGGCAAGTGCCTAGAAGGTGGCAATTTTGTGCTAAATAAATCTAAA  700

seq1  AGGGTAAGAACTAATGGGCACTTAATATCAGCTCATGGTGAGTGCCCGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAAGAACTAATGGGCACTTAATATCAGCTCATGGTGAGTGCCCGGG  750

seq1  GACATAACATTTGATGACTCCCTAACAGTCTCTAAACAAGCGTTTTCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAACATTTGATGACTCCCTAACAGTCTCTAAACAAGCGTTTTCATT  800

seq1  TTACTCCAGTCCGTCCTCAAACAAAATCACGGGCTTCAGACCCATAGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCCAGTCCGTCCTCAAACAAAATCACGGGCTTCAGACCCATAGGGA  850

seq1  GGAAGTTAGAGCGTACAGCGTGCCATCAGTGGTTATGAAAGCAGTTCTCG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTAGAGCGTACAGCGTGCCATCAGTGGTTATGAAAGCAGTTCTCG  900

seq1  AAAACTCTAGAAATTTGTTCACAAAACCAGACAGTAATGCCAAGTTCCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTAGAAATTTGTTCACAAAACCAGACAGTAATGCCAAGTTCCCT  950

seq1  GGTCCCGCAGTGACTTACCAGGTGAGCTCTGCCCACTGGTAAACTTGCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCGCAGTGACTTACCAGGTGAGCTCTGCCCACTGGTAAACTTGCTT  1000

seq1  CCCTCTGCTCTGTCCTCTGAGTTGTTTCCTGATTTTTGCCTCCTCTTTCA  1050
      ||||||||||||| |||||||||||||||||||||||||   ||||||||
seq2  CCCTCTGCTCTGT-CTCTGAGTTGTTTCCTGATTTTTGC--TCTCTTTCA  1047

seq1  AATCTATTTTCCATCACTTGCTTCTTGAACAATAGTTCAAATAGAGTTTA  1100
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AATCTATTTTCCATCACTTGCTTCTGGAACAATAGTTCAAATAGAGTTTA  1097

seq1  TAAGGATGGGCTATAACCCAGAAGTAATC-TCCCACTGCACTTTAAAAAA  1149
      ||||||| |||||| |||||||||||||| ||||||||||||||||||||
seq2  TAAGGAT-GGCTAT-ACCCAGAAGTAATCTTCCCACTGCACTTTAAAAAA  1145

seq1  CTAGTGAGTTACAAAAAGCATCTC-CATCTTCCAACACAGTCTCCCTAAC  1198
      |||||||| ||| ||||||||||| |||||| ||| ||||||| | ||||
seq2  CTAGTGAG-TAC-AAAAGCATCTCTCATCTT-CAAAACAGTCT-CGTAAC  1191

seq1  ATTGTTTCTGCCCACTAAT--AGAAACAT--GACAACTGTGTGC---TTT  1241
      || |  ||||||  |||||  ||||||||   ||| ||||||||     |
seq2  ATGG--TCTGCC--CTAATAGAGAAACATTGAACACCTGTGTGCGCTCAT  1237

seq1  ACTTCAATT  1250
      |||||||||
seq2  ACTTCAATT  1246


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