BAC Information

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BAC

Clone NameB6Ng01-339M17
Chromosome2 (Build37)
Map Location 141,486,015 - 141,486,428
singlet/doubletsinglet
Overlap genenone
Upstream geneFlrt3
Downstream geneLOC668913, LOC668914, Kif16b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339M17.bB6Ng01-339M17.g
ACCGA123690GA123691
length910941
definitionB6Ng01-339M17.b B6Ng01-339M17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaatgatgcatttttctgtcatttctcattttttatgtgttgga
aaacaaatctaccttttcaccctgtgagatatgcaattgttccaggaaaa
aggcataatttatgtttcttcccctcatggggttcacatcattcagaaac
acttggagaggttttcaatgagccatccagaagacggctcggtgggatgc
ctgacagtttacactaagagagagaggaggatctggaatttgtaaggatg
accgacaggaagcaggacaacaaaaacgcctctctagttttatgtttccc
tttgtcaataaagctagagccacagaactataataccaacaggtaatctc
tgtttggcaacttctcacatatcattttagttctgtcagctcaggctggc
atttctatgtcattattgattatattatattttacaaagagaaataccta
aatatatatatatatatatatatatatatatatatatatatgtgtgtgtg
tgtgtatatatatatatctatatatatatatatataaatatataacatac
gcgcgtgtgcgcgcgcacatacacataaatatgtgaatgtgagtgagtga
gagagtgagagtgagtgtgagtgttttgtggctctctctctcttgagata
gagagagatataaatatagagatatatatatatgtgtttacgtgttctct
ctcacacacacacacacgcactcacaccctctcctctctcatcatcttta
cgcaggtagcacgcgcgactgactagagtgggcggtctcctatagagagc
actgcgcgtgtgcgtgtgtgagtctttcagctctgagagagagatagaaa
aaaacttctgtattgtctgatactatatgttttttgtggtgcgagtggcg
atgggagatg
gaattctttgttcagctctgagccctattttttaatggggttgttttatt
ttctggagtccaccttctttagttctttatatatatttgatcttagtccc
cggcctttttgtcttattgacggtgtcttttgctttgcagaagatttgca
attttatgaggtcccatttatcgattcttgattttacagcacaagccatt
gctgatttattcaggaatttttcccctgtacccatatcttcgaggctttt
ccctactttctcctctataagtttcagtgtctctggttttatgtggagtt
ccttaattcacttttatttgaccttagtacaaggagagatggctcagccg
ttaaaggctaggctcacaaccaaagatataagagaccttcttcatacatg
tagatattttaggaagatttgatttattaggtttccagatgaaactaaac
ttaatttagttattgcttctcatgtatcttcaattgttcctattttccct
ccaacttctcattgtatccttgttttccactctgccattataaataccca
ttcttttattccccttcctaattatattgattcctttcctttagtccctt
attccatcccttaattatgtgaccaagagtgccttaactggatctttttg
acgacccaccacagtgacttccatagtacctgcatgagtttgtaatccct
tagcaatgaataactcttctcttatttctcatcctcatctttaccagcat
gaatattcattcatattattgttcttggccattatcataggtataagata
aaatctgaaagcagtgttgatttaaatttctctgttggctaaggatattg
aatatttatttaagtgtttcttggctatttgagtttcttctctgagagat
atctctttatgtaacctgttattaattaggttatttgttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_141486015_141486428
seq2: B6Ng01-339M17.g_67_450

seq1  GAATTCTTTGTTTATCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      |||||||||||| | |||||||||| |||||||||||||||| ||| |||
seq2  GAATTCTTTGTTCAGCTCTGAGCCCTATTTTTTAATGGGGTTGTTTTATT  50

seq1  TTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCC  100
      ||||||||||||||||||| ||||||||||||||||| ||| ||||||||
seq2  TTCTGGAGTCCACCTTCTTTAGTTCTTTATATATATTTGATCTTAGTCCC  100

seq1  CTATCTGATTTAAGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150
      |                                            |||||
seq2  C--------------------------------------------GGCCT  106

seq1  TTTTGTCTTATTGACGGTGTCTTTTGCCTTACAGAAGCTTTGCAGTTTCA  200
      ||||||||||||||||||||||||||| || |||||| |||||| ||| |
seq2  TTTTGTCTTATTGACGGTGTCTTTTGCTTTGCAGAAGATTTGCAATTTTA  156

seq1  TGAGGTCCCATTTGTCAATTCTCGATATTACAGCACAAGCCATTGTTGTT  250
      ||||||||||||| || ||||| ||| |||||||||||||||||| || |
seq2  TGAGGTCCCATTTATCGATTCTTGATTTTACAGCACAAGCCATTGCTGAT  206

seq1  CTATTCAGGAGTTTTTCCCCTGTGCCCATATCTCCGATGCTTTTCCCCAC  300
       ||||||||| |||||||||||| ||||||||| ||| ||||||||| ||
seq2  TTATTCAGGAATTTTTCCCCTGTACCCATATCTTCGAGGCTTTTCCCTAC  256

seq1  TTTCTCCTCTATAATTTTCAGTGTCTCTGGTTTTATGTGAAGTTTCTTGA  350
      |||||||||||||| |||||||||||||||||||||||| |||| ||| |
seq2  TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAA  306

seq1  TCCACTTAGATTT--------------GAGAAATGGCTCAGCCATTAAAG  386
      | |||||  ||||              |||| ||||||||||| ||||||
seq2  TTCACTTTTATTTGACCTTAGTACAAGGAGAGATGGCTCAGCCGTTAAAG  356

seq1  GCTAGGCTCACAACCAAAAATATAAGAG  414
      |||||||||||||||||| |||||||||
seq2  GCTAGGCTCACAACCAAAGATATAAGAG  384