BAC Information

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BAC

Clone NameB6Ng01-340A05
Chromosome2 (Build37)
Map Location 108,502,618 - 108,503,746
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043078, LOC668790
Downstream geneLOC623003, LOC100043423, LOC623031, Mett5d1, Kif18a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340A05.bB6Ng01-340A05.g
ACCGA123849GA123850
length8121,120
definitionB6Ng01-340A05.b B6Ng01-340A05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgagttgctatagcttgtcttacagctttatgacatatattg
gagcacaataaagctcttagcaacttctgagggctttaggtgagaaactt
ttcttggctttctagctttgataagctggctttactcttagctcatattc
tgtcctcaaacagcagcagtattgattctctctgtgactcttcctcagtc
atgttttcctctaactgattcactctcctcccactcttcatcctccctct
tctctttcaaaaagcatgtgattaaacaggccagataattcagaataaca
gaaaatcaaccttagttgtatctacaacatttattccaatatatcaggca
atacaatgtagttacaggtcttatggtttagaacataaacatcttgaaaa
aaattatatatttttcttccagtaattagatatacgtttatttaaatttt
gtttttgacattcacggtgtgttagacatgtagtagctcctggatatata
ttaacaaaaacgaatgtagcctgtggcattttggaattttcagaaaggtg
atataatgtcaattagataattgtagaaataatattatgagagtatgtaa
atgttgttttgggttattgttatggattgccctgatgctgtttgtattct
gatgttaatactgcttcctcaagaggggttgccccaacaaaaagctggca
tgtattcaggtgctctcaggtgatccttcttccctttctaactggtcaat
aaaggccagagcctgtgactggacaggagaggggaaaggtgggatgagaa
gtttgggagagt

gaattccttgtaaacaaagatgctatcaagtattgcttttatagtgtgat
ttttgagggagcccaagttaaataggcttactcaaatcctaggctatgta
gataggaaaaaccttagacttgaatgtttattggtatggtttattatgta
tagccccaacaaattcaatgtaaggaatatctatacatcgttgccatatg
taagttcatctaacttctcaaaggttcgtccaacagtttagtgataatct
aaaaaacttgcactgtgtgaattcattagtgttgctaggagctacagcag
cttcacatgtacattgaaaaacatatatgtggcctccttaatatttttct
ctagctcccaggaataaagactgtaggatttatttttatacttgatgaaa
tctaaaatgtcataaacatctgaaaatcctttggggattacattagtccc
ttgaacatagccagcatttgaaactaatttcctcaaaatttctattactt
ttacataaagtacattttgaaaataagagacatttctatggagggcaagt
ttcaaaaaaataaaggagttgttgatgatggtttgtattgttttgcactt
ttaagaagcagaagactgtatgacaattgagaacaccctttctgaactca
gtacctcttacaaagcaatgaaaatcagcattttaagaaaaaattcttgt
ttatttttcacagtaaaacattgaacactagtaatgctacaaaaacttta
tttacttaatttgttggcaaaaaatactaacaaacataagataaattgac
aaaagctggaaaaatatactttcagaggatagcatcaatatttgcaaata
tatcatctatagctatattatagagagctatagtacccttggcaagcgag
aacaaaggattttgcattatgaaagttaggctgtagtgaatatgtaggta
atcacttttttccattgcctgggacataagctatgcactcaggggctctc
tggtctggctccacacattttaacatctcatttgctatgagagtttggac
ccctccctcaaatctagaacattggatattcgtggtgtggaacagctgtg
gcttagtcttgttgctacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_108502618_108503746
seq2: B6Ng01-340A05.g_65_1184

seq1  GAATTCCTTGTAAACAAAGATGCTATCAAGTATTGCTTTTATAGTGTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTAAACAAAGATGCTATCAAGTATTGCTTTTATAGTGTGAT  50

seq1  TTTTGAGGGAGCCCAAGTTAAATAGGCTTACTCAAATCCTAGGCTATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGGGAGCCCAAGTTAAATAGGCTTACTCAAATCCTAGGCTATGTA  100

seq1  GATAGGAAAAACCTTAGACTTGAATGTTTATTGGTATGGTTTATTATGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGAAAAACCTTAGACTTGAATGTTTATTGGTATGGTTTATTATGTA  150

seq1  TAGCCCCAACAAATTCAATGTAAGGAATATCTATACATCGTTGCCATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCCAACAAATTCAATGTAAGGAATATCTATACATCGTTGCCATATG  200

seq1  TAAGTTCATCTAACTTCTCAAAGGTTCGTCCAACAGTTTAGTGATAATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCATCTAACTTCTCAAAGGTTCGTCCAACAGTTTAGTGATAATCT  250

seq1  AAAAAACTTGCACTGTGTGAATTCATTAGTGTTGCTAGGAGCTACAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTTGCACTGTGTGAATTCATTAGTGTTGCTAGGAGCTACAGCAG  300

seq1  CTTCACATGTACATTGAAAAACATATATGTGGCCTCCTTAATATTTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACATGTACATTGAAAAACATATATGTGGCCTCCTTAATATTTTTCT  350

seq1  CTAGCTCCCAGGAATAAAGACTGTAGGATTTATTTTTATACTTGATGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCCCAGGAATAAAGACTGTAGGATTTATTTTTATACTTGATGAAA  400

seq1  TCTAAAATGTCATAAACATCTGAAAATCCTTTGGGGATTACATTAGTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAATGTCATAAACATCTGAAAATCCTTTGGGGATTACATTAGTCCC  450

seq1  TTGAACATAGCCAGCATTTGAAACTAATTTCCTCAAAATTTCTATTACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACATAGCCAGCATTTGAAACTAATTTCCTCAAAATTTCTATTACTT  500

seq1  TTACATAAAGTACATTTTGAAAATAAGAGACATTTCTATGGAGGGCAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATAAAGTACATTTTGAAAATAAGAGACATTTCTATGGAGGGCAAGT  550

seq1  TTCAAAAAAATAAAGGAGTTGTTGATGATGGTTTGTATTGTTTTGCACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAAAATAAAGGAGTTGTTGATGATGGTTTGTATTGTTTTGCACTT  600

seq1  TTAAGAAGCAGAAGACTGTATGACAATTGAGAACACCCTTTCTGAACTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAGCAGAAGACTGTATGACAATTGAGAACACCCTTTCTGAACTCA  650

seq1  GTACCTCTTACAAAGCAATGAAAATCAGCATTTTAAGAAAAAATTCTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTCTTACAAAGCAATGAAAATCAGCATTTTAAGAAAAAATTCTTGT  700

seq1  TTATTTTTCACAGTAAAACATTGAACACTAGTAATGCTACAAAAACTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTCACAGTAAAACATTGAACACTAGTAATGCTACAAAAACTTTA  750

seq1  TTTACTTAATTTGTTGGCAAAAAATACTAACAAACATAAGATAAATTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTAATTTGTTGGCAAAAAATACTAACAAACATAAGATAAATTGAC  800

seq1  AAAAGCTGGAAAAATATACTTTCAGAGGATAGCATCAATATTTGCAAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTGGAAAAATATACTTTCAGAGGATAGCATCAATATTTGCAAATA  850

seq1  TATCATCTATAGCTATATTATAGAGAGCTATAGTACCCTTGGCAAGCGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCTATAGCTATATTATAGAGAGCTATAGTACCCTTGGCAAGCGAG  900

seq1  AACAAAGGATTTTGCATTATGAAAAGTTAGGCTGTAGTGAATATGTAGGT  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AACAAAGGATTTTGCATTATG-AAAGTTAGGCTGTAGTGAATATGTAGGT  949

seq1  AATCACTTTTTTCCATTGCCTGGGGACATAAGCTATGCAACTCAGGGGCT  1000
      ||||||||||||||||||||| |||||||||||||||| |||||||||||
seq2  AATCACTTTTTTCCATTGCCT-GGGACATAAGCTATGC-ACTCAGGGGCT  997

seq1  CTCTGGTCTGGCT-CACACATTTTAACATCTCATTTGCTATGAAGAAGTT  1049
      ||||||||||||| |||||||||||||||||||||||||||||   ||||
seq2  CTCTGGTCTGGCTCCACACATTTTAACATCTCATTTGCTATGA--GAGTT  1045

seq1  TTGAACACT-CCTCAAATCTAGAACATTTGGTATAATTCGGTGTGT-GAA  1097
      | || | || |||||||||||||||||| | |   |||||  |||| |||
seq2  TGGACCCCTCCCTCAAATCTAGAACATTGGAT---ATTCGTGGTGTGGAA  1092

seq1  CAGCTGTGGCTAAGTTCTTGTTTTGCCTACTA  1129
      ||||||||||| || |||||||    ||||||
seq2  CAGCTGTGGCTTAG-TCTTGTT---GCTACTA  1120


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