BAC Information

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BAC

Clone NameB6Ng01-341A06
Chromosome2 (Build37)
Map Location 40,101,401 - 40,102,351
singlet/doubletsinglet
Overlap genenone
Upstream geneVmn2r-ps2, Ppia-ps2_560.1, LOC100042604, Magmas-ps
Downstream geneLOC666531, Lrp1b, LOC100042629
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341A06.bB6Ng01-341A06.g
ACCGA124534GA124535
length9511,152
definitionB6Ng01-341A06.b B6Ng01-341A06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatagctatttcattggactcatgtttgctagagtttgaaaagca
tggcacagattcatctctgactgacaatatactatggaaaatattatact
acactacactacactgcactacaataatcaaaatacaaataatttgtatc
attctcttctcagcttagtaaacattcttctgtctgaatatgcttcattc
ccagatgtaagtagactcaataataactctaaattattatttggaaatct
gctctccttgaaaccaaccctgtcctcaattagtataccataaatagtat
tgtagtccaatacatttaattgtatacccttctacattttacaagcatat
gtatgtatgtatgtatgtatgtatgtatgtatgtatacacacacacatac
acacacatacacacacacatatatttggtaatatatagtcaatttggtgt
atttttggtgtgttcttctttggggaagatatttctgtctcactctcagc
attccttagttgcctgtagttgtacaaacaactagggtggatgccttgtg
gtctttattcatttactttgacatgtcttttggttgtccttgttcaactc
atgtttaggcagtcaggttgatgagacattatgggtgtggtttcttacat
tactaggagccacaatctcagagcaatgtccctgatcatttggctcttac
aatcctttctgtagtgtttctggaatgttaggtacaggattggtttgtag
acatgtatcttaagactgggttccacacctttgcattttgattggttata
ttgtttctgaaacagtctctgtttcaagagaagtttgcttcactgaggac
tagatttatcttgtggttataaggcagatgttttgaatgtaattagggat
tattctagtgtactaagtggtggttatagattctccatcaagatccatga
t

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atttatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaacttatgaaattcctagccaa
atggatggacctggagggcatcatcctgaatgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgcaaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccacaccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcatagggctcca
atgagagatagagaagtagccaagagctaaggatctgcaaccctatagtg
gaacacattatgactacagtacccttagctcttgtctctagctgcacata
tatcaaagatgcctagtcgcatcacttaaaagaagtcatgaacttgcaac
tttaatggccagtacaggtaccagcaaagggaatgggtggccaggggatt
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_40101401_40102351
seq2: B6Ng01-341A06.b_45_995

seq1  GAATTCATAGCTATTTCATTGGACTCATGTTTGCTAGAGTTTGAAAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGCTATTTCATTGGACTCATGTTTGCTAGAGTTTGAAAAGCA  50

seq1  TGGCACAGATTCATCTCTGACTGACAATATACTATGGAAAATATTATACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACAGATTCATCTCTGACTGACAATATACTATGGAAAATATTATACT  100

seq1  ACACTACACTACACTGCACTACAATAATCAAAATACAAATAATTTGTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTACACTACACTGCACTACAATAATCAAAATACAAATAATTTGTATC  150

seq1  ATTCTCTTCTCAGCTTAGTAAACATTCTTCTGTCTGAATATGCTTCATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTTCTCAGCTTAGTAAACATTCTTCTGTCTGAATATGCTTCATTC  200

seq1  CCAGATGTAAGTAGACTCAATAATAACTCTAAATTATTATTTGGAAATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGTAAGTAGACTCAATAATAACTCTAAATTATTATTTGGAAATCT  250

seq1  GCTCTCCTTGAAACCAACCCTGTCCTCAATTAGTATACCATAAATAGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCTTGAAACCAACCCTGTCCTCAATTAGTATACCATAAATAGTAT  300

seq1  TGTAGTCCAATACATTTAATTGTATACCCTTCTACATTTTACAAGCATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTCCAATACATTTAATTGTATACCCTTCTACATTTTACAAGCATAT  350

seq1  GTATGTATGTATGTATGTATGTATGTATGTATGTATACACACACACATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTATGTATGTATGTATGTATGTATGTATGTATACACACACACATAC  400

seq1  ACACACATACACACACACATATATTTGGTAATATATAGTCAATTTGGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATACACACACACATATATTTGGTAATATATAGTCAATTTGGTGT  450

seq1  ATTTTTGGTGTGTTCTTCTTTGGGGAAGATATTTCTGTCTCACTCTCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGGTGTGTTCTTCTTTGGGGAAGATATTTCTGTCTCACTCTCAGC  500

seq1  ATTCCTTAGTTGCCTGTAGTTGTACAAACAACTAGGGTGGATGCCTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTAGTTGCCTGTAGTTGTACAAACAACTAGGGTGGATGCCTTGTG  550

seq1  GTCTTTATTCATTTACTTTGACATGTCTTTTGGTTGTCCTTGTTCAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTATTCATTTACTTTGACATGTCTTTTGGTTGTCCTTGTTCAACTC  600

seq1  ATGTTTAGGCAGTCAGGTTGATGAGACATTATGGGTGTGGTTTCTTACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAGGCAGTCAGGTTGATGAGACATTATGGGTGTGGTTTCTTACAT  650

seq1  TACTAGGAGCCACAATCTCAGAGCAATGTCCCTGATCATTTGGCTCTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGGAGCCACAATCTCAGAGCAATGTCCCTGATCATTTGGCTCTTAC  700

seq1  AATCC-TTCTGTAGTGTTTCTGGAATGTTAGGTACAGGATTGGTTTGTAG  749
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTTCTGTAGTGTTTCTGGAATGTTAGGTACAGGATTGGTTTGTAG  750

seq1  ACATGTATCTTAGGACTGGGTTCCACACCTTTGCATTTTGATTGGTTATA  799
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACATGTATCTTAAGACTGGGTTCCACACCTTTGCATTTTGATTGGTTATA  800

seq1  TTGTTTTCTGAAACAGTCTCTGTTTCAAAGAGAAGTTTGC-TCACTGAGG  848
      ||| |||||||||||||||||||||| ||||||||||||| |||||||||
seq2  TTG-TTTCTGAAACAGTCTCTGTTTC-AAGAGAAGTTTGCTTCACTGAGG  848

seq1  ACTAGATTTATC-TGTGGTTATAAGGCAGATGTTTAGAATGTAATTAGGG  897
      |||||||||||| |||||||||||||||||||||| ||||||||||||||
seq2  ACTAGATTTATCTTGTGGTTATAAGGCAGATGTTTTGAATGTAATTAGGG  898

seq1  ATTATTCTAGTGTACTAAAGTGGTGGTTATAGATTCTCCATCAAGATCCA  947
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATTATTCTAGTGTACT-AAGTGGTGGTTATAGATTCTCCATCAAGATCCA  947

seq1  TGAT  951
      ||||
seq2  TGAT  951


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