BAC Information

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BAC

Clone NameB6Ng01-341J21
Chromosome2 (Build37)
Map Location 98,481,643 - 98,482,712
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621146, LOC664974, LOC100042886
Downstream geneLOC621386
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341J21.bB6Ng01-341J21.g
ACCGA124948GA124949
length1,1621,062
definitionB6Ng01-341J21.b B6Ng01-341J21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttatcgctgtactacattttttttaatagggtcatttgg
ttttctggagtctaacttcttgagttctttgtatatattggatattagcc
tcctatcagatttaggactgctaacgatcctttcccaatctgtttgttgc
cttgttgcctttctgtctcattgacagtgtcctttgccttacagaagttt
tacaactttatgaggtctcttttgttaattcttgatcttacagaacaagc
cattgctgttcttttcaggaattttccccctgtgcccatatgttcaagga
tcttccccaatttctcttctacaagcttcagtgtctctggttttacttgg
agttccttgattcaattagatttaacctttgaacaaggatataaaaatga
ttcaattagcagtcttctgcatgctaattgccctttgtgccagcactgat
tgttgaaaatgctctcctttttccactggataattttagctctttgtcaa
agatcaagggagcataggtgtgtgggttcatttctgggttttcagttcta
ttccattgatctacctgtccgtcattgtaccagtaccatgcagattttat
caaaatgctctttagcacagcttgaggtcaaagatggtgattccaccaga
ggttcttttattgttgagaatagtttttgctatcctagatatttttgtta
ttcctgatgaatttgcaaactgcccttctaactctgtggagaactgagtt
ggaattttgatggggattgcattgaatctgtagattacttttggcacgat
agccatttttattatattaatccttctaatccttgagcataggagatctt
tccatcttctgagatcttcaatttctttcttcagagacttgaaattctta
tcatatagacctttcactcacttagttaacacaaaggtatttgtgatata
tgaatggtgtttttttttcgtaattcctttctcaccctgtttattctttg
tgtagagaaagccactgaattgttgagttaattttataatcagctttcta
cttagctgagtgcttatcaaggcttggtgttctctgtgaaagtaatgtac
taatgttactatcatacctggcaatagtgacatttacatctcttgactat
tatgaagggtct
gaattctgtggcaggtttataaaccattaatatgtgtaccatgcattttt
ccaaaaaatataactaaaagaacacactcaactcatcctatgaaatcagc
attatatcagtgaatcatgagtcattagagggaacaccccccacacacac
atatctaatttttctacaaaatccacaagttttcataaactgaattcatt
tatttatgtaattatttacacagacctaaagactatgtactctataagaa
taagtatgttatacactgttgacaaacaatctatgattatcaccgaagac
agagtaaaaaattatttagcaatacctaaatttgaaatagttagttgact
aaagcactctaaacattcaggctagaaatttacttccttaacataataaa
ggccatttcaaaaatgtcctattattgatcttatatttcatggacaatat
aatatctgaattttccgatttaagattagggacaagatgaaatctcattt
tattattttcacgtgattctatactgaataaagtagccaaggtatctcag
catttaaacttgaaagagaaaattggctttgtagataatcaaaaatacta
aaaataaaatactaagaaacttattaaattgccatgaaggtaattacata
caattttagaacacaattaatataaaaaacatccaaagttcacatttaat
ccaaggtggtctgatagcatacaaggagttttgttttatttgttttttgg
ttttggttttggttttgttttttgttttcaattttattgttatctgttgt
gacatgctttgtgattgattatatggtcaattttaggaaaatgttctctg
gggtgctgaggagaaagtataatcttttgcatttgggtgaaatatactgt
agatataatgttaggtacacgtgattcataacctgtttcattatttctct
gttagtttctgtctggatgacctgtcattttggaggctgcgatgttgatg
tctcccactattatgtgtggggtcaatgtgtgattcatttaatatgttct
ttaaggatgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_98481643_98482712
seq2: B6Ng01-341J21.g_66_1127

seq1  GAATTCTGTGGCAGGTTTATAAACCATTAATATGTGTACCATGCATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGGCAGGTTTATAAACCATTAATATGTGTACCATGCATTTTT  50

seq1  CCAAAAAATATAACTAAAAGAACACACTCAACTCATCCTATGAAATCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAATATAACTAAAAGAACACACTCAACTCATCCTATGAAATCAGC  100

seq1  ATTATATCAGTGAATCATGAGTCATTAGAGGGAACACCCCCCACACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATCAGTGAATCATGAGTCATTAGAGGGAACACCCCCCACACACAC  150

seq1  ATATCTAATTTTTCTACAAAATCCACAAGTTTTCATAAACTGAATTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTAATTTTTCTACAAAATCCACAAGTTTTCATAAACTGAATTCATT  200

seq1  TATTTATGTAATTATTTACACAGACCTAAAGACTATGTACTCTATAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATGTAATTATTTACACAGACCTAAAGACTATGTACTCTATAAGAA  250

seq1  TAAGTATGTTATACACTGTTGACAAACAATCTATGATTATCACCGAAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATGTTATACACTGTTGACAAACAATCTATGATTATCACCGAAGAC  300

seq1  AGAGTAAAAAATTATTTAGCAATACCTAAATTTGAAATAGTTAGTTGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAAAAATTATTTAGCAATACCTAAATTTGAAATAGTTAGTTGACT  350

seq1  AAAGCACTCTAAACATTCAGGCTAGAAATTTACTTCCTTAACATAATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACTCTAAACATTCAGGCTAGAAATTTACTTCCTTAACATAATAAA  400

seq1  GGCCATTTCAAAAATGTCCTATTATTGATCTTATATTTCATGGACAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATTTCAAAAATGTCCTATTATTGATCTTATATTTCATGGACAATAT  450

seq1  AATATCTGAATTTTCCGATTTAAGATTAGGGACAAGATGAAATCTCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTGAATTTTCCGATTTAAGATTAGGGACAAGATGAAATCTCATTT  500

seq1  TATTATTTTCACGTGATTCTATACTGAATAAAGTAGCCAAGGTATCTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTTCACGTGATTCTATACTGAATAAAGTAGCCAAGGTATCTCAG  550

seq1  CATTTAAACTTGAAAGAGAAAATTGGCTTTGTAGATAATCAAAAATACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAACTTGAAAGAGAAAATTGGCTTTGTAGATAATCAAAAATACTA  600

seq1  AAAATAAAATACTAAGAAACTTATTAAATTGCCATGAAGGTAATTACATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAATACTAAGAAACTTATTAAATTGCCATGAAGGTAATTACATA  650

seq1  CAATTTTAGAACACAATTAATATAAAAAACATCCAAAGTTCACATTTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTAGAACACAATTAATATAAAAAACATCCAAAGTTCACATTTAAT  700

seq1  CCAAGGTGGTCTGATAGCATACAAGGAGTTTTGTTTTATTTGTTTTTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGTGGTCTGATAGCATACAAGGAGTTTTGTTTTATTTGTTTTTTGG  750

seq1  TTTTGGTTTTGGTTTTGTTTTTTGTTTTCAATTTTATTGTTATCTGTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTTTGGTTTTGTTTTTTGTTTTCAATTTTATTGTTATCTGTTGT  800

seq1  GACATGCTTTGTGATTGATTATATGGTCAA-TTTAGGAAAATGTTCTCTG  849
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GACATGCTTTGTGATTGATTATATGGTCAATTTTAGGAAAATGTTCTCTG  850

seq1  GGGTGCTGAGGAGAAAGTATAATCTTTTGCATTTGGGTGAAATATACTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTGAGGAGAAAGTATAATCTTTTGCATTTGGGTGAAATATACTGT  900

seq1  AGATAT-ATGTTAGGTACACGTGATTCATAACCTGTTTCATTATTTCTCT  948
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAATGTTAGGTACACGTGATTCATAACCTGTTTCATTATTTCTCT  950

seq1  GTTTAGTTTCTGTCTGGATGACCTGTCAATTTTGGAGGCTGCGATGTTGA  998
      | ||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  G-TTAGTTTCTGTCTGGATGACCTGTC-ATTTTGGAGGCTGCGATGTTGA  998

seq1  TGTCTCCCACTATTAATGTGTGGGGTTCAATGTGTGATTTCAATTTTAAT  1048
      |||||||||||||| |||||||||| ||||||||||| ||||  ||||||
seq2  TGTCTCCCACTATT-ATGTGTGGGG-TCAATGTGTGA-TTCA--TTTAAT  1043

seq1  ATTGTTTCTTTAAAGAATGTCA  1070
      ||   |||||| ||| ||||||
seq2  AT--GTTCTTT-AAGGATGTCA  1062