BAC Information

Click to search

BAC

Clone NameB6Ng01-341O19
Chromosome2 (Build37)
Map Location 150,627,295 - 150,767,160
singlet/doubletdoublet
Overlap genePygb, Abhd12, Gins1, LOC668925, 4930519N13Rik
Upstream geneC530025M09Rik, OTTMUSG00000015750, LOC279056, Zfp120, EG245174, 3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik, Acss1, Vsx1, Entpd6, LOC100043605
Downstream geneLOC668926, Nanp, LOC433486, LOC381390, 4930442J19Rik, LOC100043839, LOC100043840, 4921509C19Rik, Nsfl1c, Fkbp1a, Sdcbp2, Snph, LOC668929, BC052486, 5430405G05Rik, Psmf1, Rspo4, Angpt4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341O19.bB6Ng01-341O19.g
ACCGA125168GA125169
length803962
definitionB6Ng01-341O19.b B6Ng01-341O19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,766,357 - 150,767,160)(150,627,295 - 150,628,248)
sequence
gaattctggaatgatgtgaatgaagctgacatttagaagcattttcttaa
acgagtgtttgacctccatattcatatccttatttctccggtaaatatat
aaagacagcatagaggctggctggctgttcaagccttggtaatcttcctc
tggcaacacctcacaatccgtaattatttccctttagcttcagttgtacc
aatggcctgggtgcatcaggcatagccgagaagactgagagggagaactt
gaactactttgatcagtgtttctttctcctggaggcttgggagttagaga
ctacacgtgtttctgttcatagtgatctgtgacgtgtgaatttctgctca
tgctcaaaaaaaaagttcttcagacaaaaatgatgtttaggaacgaagca
gctacagggaaagattcccagaaaccttctaggtcctggatacatcctgc
tctttagactcaacttcttgtatatatttatggtacatttctcctttgga
gctgaagctaaggaaaggttttcctactttagttaaatcattaataaatt
cataacatgtacataaaaatgtgtttgaactctttttgctatagactcaa
aagtacaaggatgaaatgtcacagctcaactgcagggtccttcagctgga
aggagagccttctggtctccatacacagaaggaagagaaccacggtgcta
tccaggtgttaatgaagaagctggaggaggcagggtgccgggaggagcag
cagtcaggggctaggctgtcccacaaaccttggtgggtgggtgggtggaa
gga
gaattctacatgggccgcacgctgcagaataccatggtgaacctgggcct
tcagactgcatgcgacgaagccacttatcaggtgtgtttaatctgtcccc
tgaagagtgaccactgacattaggacacctgtgccctggagtgttttacc
ctgtcaggaaggatcatgtcccttcctcaaggggagaacataagactgta
agggatgataataaatggaattatgagaagactggtttgagtggtgatgc
tgtggtttagaagtttctagaaatgtactcccttctcccagtccaggggt
aggttttgaatatgtcatgatctatttgatttccctctctgatcttcaga
catcctcctgacctcattgtgctgtgcaggtgtagaagtgcctcctctca
tggaagaagccaactgttcaggcattttctttgccttaattttacacagg
tcgtttgtaccctcagcagagctgtgcttatctcccagtctctcttcact
ctcctctctcctctggaacgctggtctcagatggggaagttctgtagtga
gaccttgcaacatgggtacatgaaggtctttagagaggggtgccccccat
gttgccgcagcaccccatctgctttgttcagagcttaggtatgaggagtt
tgggggcctggtagggacataagtccagcatgggagtaagtctcgtttgg
agaccaccttctctcctgaggatgtttagtcaccattctattgctatgaa
aaaataatgtagagaaatcgaaagaaagaaagatccatttcggttccagt
ctcagtgggcctgagacaggcagccctgcatgtaatgaagccgcttacag
gtgagcatgttggcagaagtcggcctgcccacttcccagagccagcaatc
aggacagagacgcaggggccaggacgcacttcctggaggggtgccttccc
ccgcagggaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_150766357_150767160
seq2: B6Ng01-341O19.b_49_851 (reverse)

seq1  TCCTTCCACCCACCCACCCACCAAGGTTTGTGGGACAGCCTAGCCCCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCACCCACCCACCCACCAAGGTTTGTGGGACAGCCTAGCCCCTGA  50

seq1  CCTGCTGCTCCTCCCGGCACCCTGCCTCCTCCAGCTTCTTCATTAACACC  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CTGCTGCTCCTCCCGGCACCCTGCCTCCTCCAGCTTCTTCATTAACACC  99

seq1  TGGATAGCACCGTGGTTCTCTTCCTTCTGTGTATGGAGACCAGAAGGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAGCACCGTGGTTCTCTTCCTTCTGTGTATGGAGACCAGAAGGCTC  149

seq1  TCCTTCCAGCTGAAGGACCCTGCAGTTGAGCTGTGACATTTCATCCTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCAGCTGAAGGACCCTGCAGTTGAGCTGTGACATTTCATCCTTGT  199

seq1  ACTTTTGAGTCTATAGCAAAAAGAGTTCAAACACATTTTTATGTACATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGAGTCTATAGCAAAAAGAGTTCAAACACATTTTTATGTACATGT  249

seq1  TATGAATTTATTAATGATTTAACTAAAGTAGGAAAACCTTTCCTTAGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATTTATTAATGATTTAACTAAAGTAGGAAAACCTTTCCTTAGCTT  299

seq1  CAGCTCCAAAGGAGAAATGTACCATAAATATATACAAGAAGTTGAGTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCAAAGGAGAAATGTACCATAAATATATACAAGAAGTTGAGTCTA  349

seq1  AAGAGCAGGATGTATCCAGGACCTAGAAGGTTTCTGGGAATCTTTCCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGGATGTATCCAGGACCTAGAAGGTTTCTGGGAATCTTTCCCTG  399

seq1  TAGCTGCTTCGTTCCTAAACATCATTTTTGTCTGAAGAACTTTTTTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGCTTCGTTCCTAAACATCATTTTTGTCTGAAGAACTTTTTTTTTG  449

seq1  AGCATGAGCAGAAATTCACACGTCACAGATCACTATGAACAGAAACACGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGAGCAGAAATTCACACGTCACAGATCACTATGAACAGAAACACGT  499

seq1  GTAGTCTCTAACTCCCAAGCCTCCAGGAGAAAGAAACACTGATCAAAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCTCTAACTCCCAAGCCTCCAGGAGAAAGAAACACTGATCAAAGTA  549

seq1  GTTCAAGTTCTCCCTCTCAGTCTTCTCGGCTATGCCTGATGCACCCAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGTTCTCCCTCTCAGTCTTCTCGGCTATGCCTGATGCACCCAGGC  599

seq1  CATTGGTACAACTGAAGCTAAAGGGAAATAATTACGGATTGTGAGGTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGTACAACTGAAGCTAAAGGGAAATAATTACGGATTGTGAGGTGTT  649

seq1  GCCAGAGGAAGATTACCAAGGCTTGAACAGCCAGCCAGCCTCTATGCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGGAAGATTACCAAGGCTTGAACAGCCAGCCAGCCTCTATGCTGT  699

seq1  CTTTATATATTTACCGGAGAAATAAGGATATGAATATGGAGGTCAAACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATATTTACCGGAGAAATAAGGATATGAATATGGAGGTCAAACAC  749

seq1  TCGTTTAAGAAAATGCTTCTAAATGTCAGCTTCATTCACATCATTCCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTAAGAAAATGCTTCTAAATGTCAGCTTCATTCACATCATTCCAGA  799

seq1  ATTC  804
      ||||
seq2  ATTC  803

seq1: chr2_150627295_150628248
seq2: B6Ng01-341O19.g_65_1026

seq1  GAATTCTACATGGGCCGCACGCTGCAGAATACCATGGTGAACCTGGGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATGGGCCGCACGCTGCAGAATACCATGGTGAACCTGGGCCT  50

seq1  TCAGACTGCATGCGACGAAGCCACTTATCAGGTGTGTTTAATCTGTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTGCATGCGACGAAGCCACTTATCAGGTGTGTTTAATCTGTCCCC  100

seq1  TGAAGAGTGACCACTGACATTAGGACACCTGTGCCCTGGAGTGTTTTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGTGACCACTGACATTAGGACACCTGTGCCCTGGAGTGTTTTACC  150

seq1  CTGTCAGGAAGGATCATGTCCCTTCCTCAAGGGGAGAACATAAGACTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGGAAGGATCATGTCCCTTCCTCAAGGGGAGAACATAAGACTGTA  200

seq1  AGGGATGATAATAAATGGAATTATGAGAAGACTGGTTTGAGTGGTGATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGATAATAAATGGAATTATGAGAAGACTGGTTTGAGTGGTGATGC  250

seq1  TGTGGTTTAGAAGTTTCTAGAAATGTACTCCCTTCTCCCAGTCCAGGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTAGAAGTTTCTAGAAATGTACTCCCTTCTCCCAGTCCAGGGGT  300

seq1  AGGTTTTGAATATGTCATGATCTATTTGATTTCCCTCTCTGATCTTCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTGAATATGTCATGATCTATTTGATTTCCCTCTCTGATCTTCAGA  350

seq1  CATCCTCCTGACCTCATTGTGCTGTGCAGGTGTAGAAGTGCCTCCTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCCTGACCTCATTGTGCTGTGCAGGTGTAGAAGTGCCTCCTCTCA  400

seq1  TGGAAGAAGCCAACTGTTCAGGCATTTTCTTTGCCTTAATTTTACACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAAGCCAACTGTTCAGGCATTTTCTTTGCCTTAATTTTACACAGG  450

seq1  TCGTTTGTACCCTCAGCAGAGCTGTGCTTATCTCCCAGTCTCTCTTCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTGTACCCTCAGCAGAGCTGTGCTTATCTCCCAGTCTCTCTTCACT  500

seq1  CTCCTCTCTCCTCTGGAACGCTGGTCTCAGATGGGGAAGTTCTGTAGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTCTCCTCTGGAACGCTGGTCTCAGATGGGGAAGTTCTGTAGTGA  550

seq1  GACCTTGCAACATGGGTACATGAAGGTCTTTAGAGAGGGGTGCCCCCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGCAACATGGGTACATGAAGGTCTTTAGAGAGGGGTGCCCCCCAT  600

seq1  GTTGCCGCAGCACCCCATCTGCTTTGTTCAGAGCTTAGGTATGAGGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCGCAGCACCCCATCTGCTTTGTTCAGAGCTTAGGTATGAGGAGTT  650

seq1  TGGGGGCCTGGTAGGGACATAAGTCCAGCATGGGAGTAAGTCTCG-TTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGGGGCCTGGTAGGGACATAAGTCCAGCATGGGAGTAAGTCTCGTTTGG  700

seq1  AGACCACCTTCTCTCCTGAGGATG-TTAGTCACCATTCTATTGCTATGAA  748
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGACCACCTTCTCTCCTGAGGATGTTTAGTCACCATTCTATTGCTATGAA  750

seq1  AAAATAATGTAGAGAAATCGAAAGAAAGAAAGATCCATTTCGGTTCCAGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATGTAGAGAAATCGAAAGAAAGAAAGATCCATTTCGGTTCCAGT  800

seq1  CTCAGT-GGCCTGAGACAGGCAGCCCTGCATGTAATGAAGCCGCTTACCA  847
      |||||| |||||||||||||||||||||||||||||||||||||||| ||
seq2  CTCAGTGGGCCTGAGACAGGCAGCCCTGCATGTAATGAAGCCGCTTA-CA  849

seq1  GGTGAGCATG-TGGCAG-AGTCGG-CTGCCCACTTCCCAGAGCCAGCAAT  894
      |||||||||| |||||| |||||| |||||||||||||||||||||||||
seq2  GGTGAGCATGTTGGCAGAAGTCGGCCTGCCCACTTCCCAGAGCCAGCAAT  899

seq1  CAAGGACAGAGACGCAGGGG-CAGGACGCAC-TCCTGGA-GGGTGCCTT-  940
      | |||||||||||||||||| |||||||||| ||||||| ||||||||| 
seq2  C-AGGACAGAGACGCAGGGGCCAGGACGCACTTCCTGGAGGGGTGCCTTC  948

seq1  CCCCGCAGGGACCC  954
      ||||||||||||||
seq2  CCCCGCAGGGACCC  962