BAC Information

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BAC

Clone NameB6Ng01-343D19
Chromosome2 (Build37)
Map Location 98,732,336 - 98,733,493
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621146, LOC664974, LOC100042886
Downstream geneLOC621386
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343D19.bB6Ng01-343D19.g
ACCGA126066GA126067
length1,2321,145
definitionB6Ng01-343D19.b B6Ng01-343D19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactgataagtggatattggccataaaatacaggatacacatgct
atactccatagacctatagaagctaaacaagaagaaagccaggatgctca
aatctcccttagaagggagaataatattgttctatgcagcatatagagtg
agggaactgtgtgggagaagggagaccgaggggaatgggtggggttcagg
atcaggaaaaggagaaaagatgagatgacctggagaataaaatgaaatcg
gcaactggttgagtattgtgatataggggcatcttgtggacatgccagag
acctgggatatggtacacacccaagaatcagtgggtgacctcatctgtga
ttcagaacattaggaatatggaaccagaagaggctacctcctatgaccag
gatggaccctagtggaaaaataagggcaccaacccacgaacaagactctt
gacccacaatgccctgtcttcaagaaatgcagggattggtgatggagcag
agactgagggaatagaaagtaataaccagcccaactagagactcatccca
tgggcaagcaccagtcactgacactatcactgatgctctggtatgcttta
caggaagaccaacagagtcaactaacctgtacccttggggctctcagaga
ctgaaccaccaaccaaagagaatgtacagtctggtcttaacaccctcatt
cctgtacatatgaagcaaatatgcagcacagatcttcataatggacccaa
acaaatggaggggattctatcccaaaagctgtctatggtatatgttctag
ctgggctgctttgtctggcttaaggtgtagaggatgtgcctacccctgtt
gaaacttgatgtgccatgaggtggtataccccctagggggtggtgactgg
gctccactttttcagagaagaatgaaaggagtatggaagcagggactgtg
ggaaagtttggcctggagcaggggtagtatagttatggaaagagagtaaa
tatataaatttaaacaacaaaccataactcacttacctaataatcatcat
acaatcagcaaaaacaaaatgagataccaatccatcctacaagttagatc
ttatgaaaggcagacatatatcaattatttaaattatacactgttttaag
gtaatcatattgactagacattgtaataacgcatgcagacagtcgcttct
gatgataaaatgaaggatcatcataatagtag

gaattcatggtaatactggctttgtagcatggcttccatagttcataaac
attttcttttattttattgaatagctggagagttattgatgtcatctctt
ttttaatattttggtagatatcaaaaaatatgtgtctaatcctgtgtctt
tctttctgaaagatttttagttactttctgaatatacttgctttttattg
gtctaagtaagaagattcattgaatgtatacttaactttggttagaaata
ggcaggcaaatgtctattttaatgaacctagggctactgtaataagacac
acttcctctatcattttatcatctatctattatctatcatgtatctatca
aattatctatccatatgtatatggatatatattctatctaactctattaa
aatatcattttagttactattggctactaaaataaaatatcgtaacctaa
ataatttataattgctattgatatattaattttaattgtaaatgcaaata
gttaaacatcaaacatttggaatctgatgagaatattattactattgatt
ttgtgttatcagtgttcattcatatggtaggaataatcaggcagttcaca
gtggcatttttgtttttgatttttgtttttgttagtgtgctaatctctct
ctctctctctctctctctctctctctctctttcaagagagggtttctctg
tatagccctggctgtcctggaactcactttgtagaccagagtggcctcga
atagagaaatccacctgcttctgcctcctgagagctgggataaaggtgtg
tgccaccacgccctgctctagtgtggtaatcttttacacacatgtcttaa
cctattactaatcaatttccaaacatccccaatctagactatttttgagt
actattataactgcttctttctatattctctaaatgatgtgaaagtatcc
aaaaatcggacattttgcctttccttttgatattcttgtatgaagaaagt
taaagatatgatatctaacttgttgtttaaaacactacagcctagagttc
cactgatattgaataaccgaccaccaatatgaatataatatccgtgacag
tggtagatgaatatttaacctggttagatagctttaactggtctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_98732336_98733493
seq2: B6Ng01-343D19.g_66_1210

seq1  GAATTCATGGTAATACTGGCTTTGTAGCATGGCTTCCATAGTTCATAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGTAATACTGGCTTTGTAGCATGGCTTCCATAGTTCATAAAC  50

seq1  ATTTTCTTTTATTTTATTGAATAGCTGGAGAGTTATTGATGTCATCTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTTTATTTTATTGAATAGCTGGAGAGTTATTGATGTCATCTCTT  100

seq1  TTTTAATATTTTGGTAGATATCAAAAAATATGTGTCTAATCCTGTGTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATATTTTGGTAGATATCAAAAAATATGTGTCTAATCCTGTGTCTT  150

seq1  TCTTTCTGAAAGATTTTTAGTTACTTTCTGAATATACTTGCTTTTTATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGAAAGATTTTTAGTTACTTTCTGAATATACTTGCTTTTTATTG  200

seq1  GTCTAAGTAAGAAGATTCATTGAATGTATACTTAACTTTGGTTAGAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAGTAAGAAGATTCATTGAATGTATACTTAACTTTGGTTAGAAATA  250

seq1  GGCAGGCAAATGTCTATTTTAATGAACCTAGGGCTACTGTAATAAGACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCAAATGTCTATTTTAATGAACCTAGGGCTACTGTAATAAGACAC  300

seq1  ACTTCCTCTATCATTTTATCATCTATCTATTATCTATCATGTATCTATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTCTATCATTTTATCATCTATCTATTATCTATCATGTATCTATCA  350

seq1  AATTATCTATCCATATGTATATGGATATATATTCTATCTAACTCTATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTATCCATATGTATATGGATATATATTCTATCTAACTCTATTAA  400

seq1  AATATCATTTTAGTTACTATTGGCTACTAAAATAAAATATCGTAACCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCATTTTAGTTACTATTGGCTACTAAAATAAAATATCGTAACCTAA  450

seq1  ATAATTTATAATTGCTATTGATATATTAATTTTAATTGTAAATGCAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTATAATTGCTATTGATATATTAATTTTAATTGTAAATGCAAATA  500

seq1  GTTAAACATCAAACATTTGGAATCTGATGAGAATATTATTACTATTGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAACATCAAACATTTGGAATCTGATGAGAATATTATTACTATTGATT  550

seq1  TTGTGTTATCAGTGTTCATTCATATGGTAGGAATAATCAGGCAGTTCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTATCAGTGTTCATTCATATGGTAGGAATAATCAGGCAGTTCACA  600

seq1  GTGGCATTTTTGTTTTTGATTTTTGTTTTTGTTAGTGTGCTAATCTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCATTTTTGTTTTTGATTTTTGTTTTTGTTAGTGTGCTAATCTCTCT  650

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCAAGAGAGGGTTTCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCAAGAGAGGGTTTCTCTG  700

seq1  TATAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGAGTGGCCTCGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGAGTGGCCTCGA  750

seq1  ATAGAGAAATCCACCTGCTTCTGCCTCCTGAGAGCTGGGATAAAGGTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAAATCCACCTGCTTCTGCCTCCTGAGAGCTGGGATAAAGGTGTG  800

seq1  TGCCACCACGCCCTGCTCTAGTGTGGTAATCTTTTACACACATGTCTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCACGCCCTGCTCTAGTGTGGTAATCTTTTACACACATGTCTTAA  850

seq1  CCTATTACTAAATCAATTTCCAAACATCCCCAATCTAGACTATTTTTTGA  900
      ||||||||| |||||||||||||||||||||||||||||||| |||||||
seq2  CCTATTACT-AATCAATTTCCAAACATCCCCAATCTAGACTA-TTTTTGA  898

seq1  GTACTATTATAACTGCTTCTTTCTATATTCTCTAAATGATGTGAAAGTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATTATAACTGCTTCTTTCTATATTCTCTAAATGATGTGAAAGTAT  948

seq1  CCAAAAATCGGACATTTTGCCTTTCCTTTTGAATATTCCTTGTATGAAGA  1000
      ||||||||||||||||||||||||||||||| ||||| ||||||||||||
seq2  CCAAAAATCGGACATTTTGCCTTTCCTTTTG-ATATT-CTTGTATGAAGA  996

seq1  AAGTTAAAAGATAATGATATCTAACTTGTTGTTTAAAACACTACAAGCCT  1050
      ||||| |||||| ||||||||||||||||||||||||||||||| |||||
seq2  AAGTT-AAAGAT-ATGATATCTAACTTGTTGTTTAAAACACTAC-AGCCT  1043

seq1  AGAGTT-CACTGATATTGAATAAACGACCACCAAATAATGAATATAATAT  1099
      |||||| |||||||||||||||| ||||||||||   |||||||||||||
seq2  AGAGTTCCACTGATATTGAATAACCGACCACCAA--TATGAATATAATAT  1091

seq1  CCGTGACAGTGGTAAAGATGGATATTTTAACCT-GTTAGATAAGGTTTAT  1148
      |||||||||||||  ||||| ||| |||||||| ||||||||  | || |
seq2  CCGTGACAGTGGT--AGATGAATA-TTTAACCTGGTTAGATA--GCTT-T  1135

seq1  AACTGGTCTC  1158
      ||||||||||
seq2  AACTGGTCTC  1145


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