BAC Information

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BAC

Clone NameB6Ng01-343I03
Chromosome2 (Build37)2 (Build37)
Map Location 115,131,972 - 115,132,563115,183,149 - 115,183,824
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAtpbd4, LOC100043219, LOC100043222
Downstream geneLOC100043232, LOC100043236, BC052040, Mrg1, G630016G05Rik, 2810405F15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343I03.bB6Ng01-343I03.g
ACCGA126265GA126266
length5861,179
definitionB6Ng01-343I03.b B6Ng01-343I03.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(115,131,972 - 115,132,563)(115,183,149 - 115,183,824)
sequence
ctttctttgacagagtgaggtagtggtaggattaattggtcttggtacca
aagtatgtattttctatctaagagtatctgcatgaagttctagaaagttc
ttgtcccacatggccatttgttacatctcctaatttctaaatgaagtata
ctcttgggcagatcagacacagctttgactatttgagtcattcttccagg
aggaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaggaagaggaagaggaagaggaagagga
agaggaagaggaagaagaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaaaagaagaagaagaagaaa
agcatgaggaaaactgtagttcgcttattcaaaaaaaaaaaaaagtacgt
ggtgatagatgggtgtataaaagaggccacaatagaaacataactgtgca
gcttctttgcctagatccaaaaccataaacagaaggtgatagatgattaa
gatggattgatagatatgtagatagatgatggatag
taacggggtggcctggtggccgcctggtgacgactttacgtgacactatc
caaaggaccacggaattcttcactcaacccgtctggtcctgggttttttt
tttttttactttttattttattttattttattttattttatttatttatt
tatttatttttgttgggagacttttaatgactgtgtcgatttatttacga
gttatgggactatttagataagttatctgatcccgatttggctacggtat
ttggtatcagtctagaaaattgtccatttcatccagatttccagttttgt
tcagggctcgcttttgctgggggatctgacaacttttgggggctctcccc
agcttcggttgttatatctcccttttcatttctgattttgttaatttgca
tactggccctgtgccctctggttagtctggttaatgaattatctatcttg
atgattttgccgaacaaccttctccttccagataagattgattttgctgg
tgtggacacctccgacacaatgaaagccattacaattatgttacattgga
tccctcatggggcaaatctgactccagctccaaggcaatcagaaccacat
tcagggaagatggacaaatgtgttaagtataaaccacttgctcccaagct
aaaagcatcaatggcccatgactgtgaaaggtagtccctcagtgacctct
aaacatgtcacatgtttacactctccccaacttgttcacacccatggccc
actcaactctcatctcatctgctccaggcttgaaggcattcatggtaata
gacttcttattctgcctctcattgcaccattgcaaactagtagcattatg
acccctgtcctcataattcaatgcttagtggcaaattcacatctatcttc
tcacctgcaatttacttctcagatataaaaccctcaaagttctgtttaaa
aaaaaaatcccaaagtcatactgtgagagtaagcagtcaggtccccaaat
gactccacaatgcctcatggtttttcactgtgcatttgtctcttgacagc
atgctgtgttatgtctctaagcgtgagatagtacagtgtgtttctaggat
tccttagatgacacacaccactcttgttgcagtccggtctggtagcacgt
tgacaaatgtactggtgtaagaccttagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_115131972_115132563
seq2: B6Ng01-343I03.b_47_638

seq1  GAATTCCTTTCTTTGACAGAGTGAGGTAGTGGTAGGATTAATTGGTCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCTTTGACAGAGTGAGGTAGTGGTAGGATTAATTGGTCTTG  50

seq1  GTACCAAAGTATGTATTTTCTATCTAAGAGTATCTGCATGAAGTTCTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAAAGTATGTATTTTCTATCTAAGAGTATCTGCATGAAGTTCTAGA  100

seq1  AAGTTCTTGTCCCACATGGCCATTTGTTACATCTCCTAATTTCTAAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTTGTCCCACATGGCCATTTGTTACATCTCCTAATTTCTAAATGA  150

seq1  AGTATACTCTTGGGCAGATCAGACACAGCTTTGACTATTTGAGTCATTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATACTCTTGGGCAGATCAGACACAGCTTTGACTATTTGAGTCATTCT  200

seq1  TCCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA  250

seq1  GAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGA  300

seq1  AGAGGAAGAGGAAGAG---GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG  347
      ||||||||||||||||   |||||||||||||||||||||||||||||||
seq2  AGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG  350

seq1  AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGAAGAAGAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGAAGAAGAAG  400

seq1  AAGAAAAGCATGAGGAAAACTGTAGTTCGCTTATTCAAAAAAAAAAAAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGCATGAGGAAAACTGTAGTTCGCTTATTCAAAAAAAAAAAAAA  450

seq1  GTACGTGGTGATAGATGGGTGTATAAAAGAGGCCACAATAGAAACATAAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGTGGTGATAGATGGGTGTATAAAAGAGGCCACAATAGAAACATAAC  500

seq1  TGTGCAGCTTTCTTTGCCTAGATCCAAAACCATAAACAGAAAGGTGATAG  547
      |||||||| |||||||||||||||||||||||||||||| ||||||||||
seq2  TGTGCAGC-TTCTTTGCCTAGATCCAAAACCATAAACAG-AAGGTGATAG  548

seq1  ATGATTAAAGATGGATTGATAGATATGTAGATAGATGATGGATAG  592
      |||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATGATT-AAGATGGATTGATAGATATGTAGATAGATGATGGATAG  592

seq1: chr2_115183149_115183824
seq2: B6Ng01-343I03.g_504_1179

seq1  GGACACCTCCGACACAATGAAAGCCATTACAATTATGTTACATTGGATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCTCCGACACAATGAAAGCCATTACAATTATGTTACATTGGATCC  50

seq1  CTCATGGGGCAAATCTGACTCCAGCTCCAAGGCAATCAGAACCACATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGGGGCAAATCTGACTCCAGCTCCAAGGCAATCAGAACCACATTCA  100

seq1  GGGAAGATGGACAAATGTGTTAAGTATAAACCACTTGCTCCCAAGCTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGATGGACAAATGTGTTAAGTATAAACCACTTGCTCCCAAGCTAAA  150

seq1  AGCATCAATGGCCCATGACTGTGAAAGGTAGTCCCTCAGTGACCTCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAATGGCCCATGACTGTGAAAGGTAGTCCCTCAGTGACCTCTAAA  200

seq1  CATGTCACATGTTTACACTCTCCCCAACTTGTTCACACCCATGGCCCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCACATGTTTACACTCTCCCCAACTTGTTCACACCCATGGCCCACT  250

seq1  CAACTCTCATCTCATCTGCTCCAGGCTTGAAGGCATTCATGGTAATAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTCATCTCATCTGCTCCAGGCTTGAAGGCATTCATGGTAATAGAC  300

seq1  TTCTTATTCTGCCTCTCATTGCACCATTGCAAACTAGTAGCATTATGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTCTGCCTCTCATTGCACCATTGCAAACTAGTAGCATTATGACC  350

seq1  CCTGTCCTCATAATTCAATGCTTAGTGGCAAATTCACATCTATCTTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCTCATAATTCAATGCTTAGTGGCAAATTCACATCTATCTTCTCA  400

seq1  CCTGCAATTTACTTCTCAGATATAAAACCCTCAAAGTTCTGTTTAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAATTTACTTCTCAGATATAAAACCCTCAAAGTTCTGTTTAAAAAA  450

seq1  AAAAT-CCAAAGTCATACTGTGAGAGTAAGCAGTCAGGTCCCCAAATGAC  499
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCCAAAGTCATACTGTGAGAGTAAGCAGTCAGGTCCCCAAATGAC  500

seq1  TCCACAATGCCTCATGGTTTTTCACTGTTGCATTTGTCTCTTGACAGCAT  549
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCCACAATGCCTCATGGTTTTTCACTG-TGCATTTGTCTCTTGACAGCAT  549

seq1  GCTGTGTTATGTTCTCTAAGCGTGGAGATAGTACAGTGTGTTTCTAGGAT  599
      ||||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  GCTGTGTTATG-TCTCTAAGCGT-GAGATAGTACAGTGTGTTTCTAGGAT  597

seq1  TCCTTAGATGGCCACACA-CACTCTTG-TGCAGTCGGGTCTGGTAGCACT  647
      ||||||||| | |||||| |||||||| ||||||| ||||||||||||| 
seq2  TCCTTAGAT-GACACACACCACTCTTGTTGCAGTCCGGTCTGGTAGCACG  646

seq1  TTAACAAATGTACT-GTGTAAGACCCTAGT  676
      || ||||||||||| |||||||||| ||||
seq2  TTGACAAATGTACTGGTGTAAGACCTTAGT  676