BAC Information

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BAC

Clone NameB6Ng01-343J10
Chromosome2 (Build37)
Map Location 43,469,121 - 43,470,276
singlet/doubletsinglet
Overlap geneKynu
Upstream geneLrp1b, LOC100041228, LOC100041245
Downstream geneArhgap15, Gtdc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343J10.bB6Ng01-343J10.g
ACCGA126327GA126328
length1,1941,146
definitionB6Ng01-343J10.b B6Ng01-343J10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaagtttactattttgaactagccctgagattactagctcttat
cctgcaaactataagatgcttgattactaactgtcaacactggggcattt
tgtctgaatgaataacattcttatgaaattccaagcccagggtcagctca
aggactgcctaggacattggtgaaggccaggcagtagagttcaacctgat
ctagatatttgtaaagtcatttcttggaggcacctgtaataaaacaatac
tgaaagaaagcacacagatccatacaccaactaacgcagggacaggtttg
gagcattcatgccaaggttccaggagactgactttctgtgaaactctttg
cctcaggactgcgtccaagattttgggcctgttacagtcttcactggagt
gggtgtggcagcattatttgttgaagactttctctactgtgtatgttggc
atctgtgttgaatattacatgggtgctgttatgcacactcagatttgtgc
cttcacttttgttctactgatcctcatgcctgcttttgtataatttccat
attatttttataacaatggctctgtaacaatcttgagagctagaatggca
gtccttatagctctgttctgttcgatcagatttattttggttatcctgcc
tctcttctctagtttcaactaattttagcatagtttttatttttcttttt
tatttccaagagaagaaagatggtaactttggttgagcttgcactgaatt
tagtggcttttagaatatggtcattttttaacaatattagttttattggt
tcatgggcatcctgtgtctttcaattttgtagtgtaaaatatttctcttt
ttcttcagagatgcaaatattttactgtagaagtctttccactccttggt
tagatttgttccaagttattttattttatttgagattgttgtgaatgcca
gtgtctctctgtgtttgttggtggtatataaaattgctcattttgcaatt
tcattctatagtcatcatattgataaaattgtgattatttctacagtttt
ctgtagattttgagatctttttgcaatagggatagaatgatcattctttt
cctatttatgttcatttcttccactgattattgcctagtatgctcagtga
acggcatacatccagtttctcttcttggaaatctccatgggggt
gaattctaggacacatgcatttaagactagaactctacaactggctatcc
tttattgagctcctttatttatttaatctcatatgtacaaaagcaagaaa
atagactcagtggcaccatcttcttgccctatattaagcctatctgacaa
agatcctacaaatgaaaaatgagcttaagctttttaatttatttatttca
gttggcttaagtgagaaaatagcttaaggtaattttttatgtttaattta
gttcatttaatttttaatgacctaatggaatattcttgattttgaaaaga
atctcaaaattaatgtaagcatgcagatcacaattttaggatagctagac
actatttgccattttcctgaaaataattatacttaacattctgttcctca
tgcaatactgtgatccatcaacttgcctgaccaacacttttgttgattgc
acacacatatctatttccagatctagcatgtacttaaaataaatcacttt
atggaaagcacagtctgcagcttatgaattttgcggagttagtcattgat
actctactgatgtaagccttctatacttgaaagaactgtaaagcagaaca
aaaggaatccaatgatatatttctcatacattcctccagacagagtgata
caaaaactttcacgatgaaggtcaagaatttcacatacaggatctctaaa
acaatgatcttagcatttaacacagctcatcatgttgctgtgacttcaca
actatcctattattttcattgctacttcctaactgtaattttgctgctgt
tgtgaatcataatgtaaataactatgctttttgatgattctcaaaggatc
taacaacccacagattgagaaccactgccctaaagtcaagaaagtaacgt
ataaattggacctgggagaatagttcacgttcctcttgtaggaatgcagt
cgggtagtgatactatgatgagctgagacttagattcagcaccaaggaca
gcgcagagcatgtcactgagaagttctaagttagcgtttcatgcacaaat
gatgatcaaacttcagtttttcctgagatattgcaatagtaaattttatt
tgatatcaatggccttgtatgtgataggtaatattacgttttacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_43469121_43470276
seq2: B6Ng01-343J10.g_63_1208 (reverse)

seq1  TAGT-AAACGTATAATTACCTATCAACAATTACAA-GCCA-TGATATTTT  47
      |||| |||||||  |||||||||| |||  ||||| |||| |||||  | 
seq2  TAGTAAAACGTAATATTACCTATC-ACA--TACAAGGCCATTGATA--TC  45

seq1  AAATAAAATTTACTATTTGCAAATATCTCAGGAAAAAACTGAAAGTTTGG  97
      ||||||||||||||| |||| ||||||||||| |||||||| |||||| |
seq2  AAATAAAATTTACTA-TTGC-AATATCTCAGG-AAAAACTG-AAGTTT-G  90

seq1  ATCATCATTTGTGCATTGAAACGCTAACCTTAGAACTTCTCAGTGACATG  147
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  ATCATCATTTGTGCA-TGAAACGCTAA-CTTAGAACTTCTCAGTGACATG  138

seq1  CTCTGCGCTGTCCTTGGTGCTGAATCTAAGTCTCAGCTCATCATAGTATC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCGCTGTCCTTGGTGCTGAATCTAAGTCTCAGCTCATCATAGTATC  188

seq1  ACTACCCGACTGCATTCCTACAAGAGGAACGTGAACTATTTCTCCCAGGT  247
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACTACCCGACTGCATTCCTACAAGAGGAACGTGAACTA-TTCTCCCAGGT  237

seq1  CCAATTTATACGTTACTTTCTTGACTTTAGGGCAGTGGTTCTCAATCTGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTATACGTTACTTTCTTGACTTTAGGGCAGTGGTTCTCAATCTGT  287

seq1  GGGTTGTTAGATCCTTTGAGAATCATCAAAAAGCATAGTTATTTACATTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGTTAGATCCTTTGAGAATCATCAAAAAGCATAGTTATTTACATTA  337

seq1  TGATTCACAACAGCAGCAAAATTACAGTTAGGAAGTAGCAATGAAAATAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCACAACAGCAGCAAAATTACAGTTAGGAAGTAGCAATGAAAATAA  387

seq1  TAGGATAGTTGTGAAGTCACAGCAACATGATGAGCTGTGTTAAATGCTAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATAGTTGTGAAGTCACAGCAACATGATGAGCTGTGTTAAATGCTAA  437

seq1  GATCATTGTTTTAGAGATCCTGTATGTGAAATTCTTGACCTTCATCGTGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTGTTTTAGAGATCCTGTATGTGAAATTCTTGACCTTCATCGTGA  487

seq1  AAGTTTTTGTATCACTCTGTCTGGAGGAATGTATGAGAAATATATCATTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTTGTATCACTCTGTCTGGAGGAATGTATGAGAAATATATCATTG  537

seq1  GATTCCTTTTGTTCTGCTTTACAGTTCTTTCAAGTATAGAAGGCTTACAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTTTTGTTCTGCTTTACAGTTCTTTCAAGTATAGAAGGCTTACAT  587

seq1  CAGTAGAGTATCAATGACTAACTCCGCAAAATTCATAAGCTGCAGACTGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGAGTATCAATGACTAACTCCGCAAAATTCATAAGCTGCAGACTGT  637

seq1  GCTTTCCATAAAGTGATTTATTTTAAGTACATGCTAGATCTGGAAATAGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCATAAAGTGATTTATTTTAAGTACATGCTAGATCTGGAAATAGA  687

seq1  TATGTGTGTGCAATCAACAAAAGTGTTGGTCAGGCAAGTTGATGGATCAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGTGCAATCAACAAAAGTGTTGGTCAGGCAAGTTGATGGATCAC  737

seq1  AGTATTGCATGAGGAACAGAATGTTAAGTATAATTATTTTCAGGAAAATG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTGCATGAGGAACAGAATGTTAAGTATAATTATTTTCAGGAAAATG  787

seq1  GCAAATAGTGTCTAGCTATCCTAAAATTGTGATCTGCATGCTTACATTAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATAGTGTCTAGCTATCCTAAAATTGTGATCTGCATGCTTACATTAA  837

seq1  TTTTGAGATTCTTTTCAAAATCAAGAATATTCCATTAGGTCATTAAAAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGATTCTTTTCAAAATCAAGAATATTCCATTAGGTCATTAAAAAT  887

seq1  TAAATGAACTAAATTAAACATAAAAAATTACCTTAAGCTATTTTCTCACT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAACTAAATTAAACATAAAAAATTACCTTAAGCTATTTTCTCACT  937

seq1  TAAGCCAACTGAAATAAATAAATTAAAAAGCTTAAGCTCATTTTTCATTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCAACTGAAATAAATAAATTAAAAAGCTTAAGCTCATTTTTCATTT  987

seq1  GTAGGATCTTTGTCAGATAGGCTTAATATAGGGCAAGAAGATGGTGCCAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGATCTTTGTCAGATAGGCTTAATATAGGGCAAGAAGATGGTGCCAC  1037

seq1  TGAGTCTATTTTCTTGCTTTTGTACATATGAGATTAAATAAATAAAGGAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTATTTTCTTGCTTTTGTACATATGAGATTAAATAAATAAAGGAG  1087

seq1  CTCAATAAAGGATAGCCAGTTGTAGAGTTCTAGTCTTAAATGCATGTGTC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATAAAGGATAGCCAGTTGTAGAGTTCTAGTCTTAAATGCATGTGTC  1137

seq1  CTAGAATTC  1156
      |||||||||
seq2  CTAGAATTC  1146