BAC Information

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BAC

Clone NameB6Ng01-344I06
Chromosome2 (Build37)
Map Location 21,615,998 - 21,616,217
singlet/doubletsinglet
Overlap geneGpr158
Upstream geneEtl4, Arhgap21, LOC433408, LOC675912, C130046B21Rik, 4933434I06Rik, Thnsl1
Downstream geneLOC637235, Myo3a, LOC100041703, Myo3a, Gad2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344I06.bB6Ng01-344I06.g
ACCGA126980GA126981
length1,207790
definitionB6Ng01-344I06.b B6Ng01-344I06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatatgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccacttgatagttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttccttcttcagggacttgaagtttttatcata
cagatctttcacttcccttcgttagagtcacgccgagatatttatattat
ttgtgggctattgagaagggtggttgtttccctaatttctttcctcagcc
tgtttattctttggtgtagaggaaggccattgacttgtttgagtatttta
tatccaggctacttcaccgaaggctgttttatcaaggttagggagtcctc
gtgtgggaatttttaagggtcaccttaaattatcattcatatcatctggc
caaaagggatattgacttccctttccattgtatccctgaggatctctttg
tgtgcgg

gaattctgcactcaaaccatctgaccctgggatttttttggttgggagga
ttttaatgactttaaatttccttaggggatatggaactgtttaggtagtt
tacctgctcttgatttaactttggcatatgatataagtctagaaagtcat
cagtttcatctagattttccagttttgttgaggaaagtcttctgtagttg
gttctaatgaatttttaaaaatttcctcagtttctgttgttatgtctccc
ttttcgtttttgattttgtgagtttggatactgtctctgtttcctttagt
tagtttggctaaggctttatttgtcttgttgatttttcttaaagaacaag
gttttggctttgttgattctttgtatcattctctttgtttctaattggtt
gattttctccctgagtttgagtatccccacccccccacccccactactct
tgggtgtgtttgcatctggtgcctttatggaagcggggacagtaatacta
tgatgccagactgagtcttctcagagtgcccagggagggggaagaagcct
tgcccttactgaaagagagatcgtggggtgggggaaggggaacttctgtg
agaaagcacagaggcaagccacctgtgcacttcactttcttgtgtcccat
aagtttgagtgtgcagtgtcttcattttcattgaattctagaaagtcttt
aatttctttatttcttccttgaccaagtttatcattgagtagagagttgt
tcagtttccataggtatgagggttttcttttgtttttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_21615998_21616217
seq2: B6Ng01-344I06.g_584_783

seq1  CTCAGAGTGGCCAGGGAGGGGGAGGAAGCCTCATGCTTGCTTCAGGAGGG  50
      ||||||||| ||||||||||||| |||||||    ||| ||  | ||| |
seq2  CTCAGAGTGCCCAGGGAGGGGGAAGAAGCCTTGCCCTTACTGAAAGAGAG  50

seq1  AGCAGGGGTTGGGGGAAGTGGAACTTCTGTGGGAAAGCACAGAGGCAAGC  100
      | |  ||| ||||||||| |||||||||||| ||||||||||||||||||
seq2  ATCGTGGGGTGGGGGAAGGGGAACTTCTGTGAGAAAGCACAGAGGCAAGC  100

seq1  TGCTTGCACACCCCACTGAGCTTGCTGTGGGAGAGAGCCTGAG-GTCAAG  149
        | ||  |||  ||||   |||| |||   | | ||  |||| ||    
seq2  CACCTGTGCACTTCACT-TTCTTG-TGTCCCATA-AGTTTGAGTGT----  143

seq1  GAAGGGGAACAACTTTGAGAAAGTGCAGAAGCAAGACGCCTGTGCACTTC  199
      | || |     | ||| |   | | |   || |||           ||| 
seq2  GCAGTGTCTTCATTTTCATTGAATTC--TAGAAAG----------TCTTT  181

seq1  ACTTGCTCTTGATTTCTTCCT  220
      | ||  |||| ||||||||||
seq2  AATT--TCTTTATTTCTTCCT  200


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