MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-344M04
Chromosome	2 (Build37)
Map Location	73,559,282 - 73,699,403
singlet/doublet	doublet
Overlap gene	Atf2
Upstream gene	6430710C18Rik, Sp3, Hspe1-ps5, Gtpbp9, LOC620110, Sp9, 1700023B02Rik, Scrn3, Gpr155, Wipf1, Chrna1, Chn1
Downstream gene	Atp5g3, LOC667729, LOC100040172, Lnp, LOC100040519, Evx2, Hoxd13, Hoxd12, Hoxd11, Hoxd10, Hoxd9, Hoxd8, 1700109F18Rik, Hoxd3, Hoxd4, LOC667804, Hoxd1, Mtx2
Link	Open Mouse BAC browser

Click to get alignment info.

name	6430710C18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76218 MGI:1923468
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Sp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20687 MGI:1277166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hspe1-ps5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93752 MGI:1935166
definition	gene_synonym : Cpn10-rs6 note : heat shock protein 1 (chaperonin 10), pseudogene 5 pseudo : _no_value

name	Gtpbp9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67059 MGI:1914309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC620110 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 152 ESTs, 12 Proteins pseudo : _no_value

name	Sp9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381373 MGI:3574660
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700023B02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66935 MGI:1914185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scrn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74616 MGI:1921866
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr155 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68526 MGI:1915776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wipf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215280 MGI:2178801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chrna1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11435 MGI:87885
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108699 MGI:1915674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Atf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11909 MGI:109349
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Atp5g3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228033 MGI:2442035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667729 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667729
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 16 Proteins pseudo : _no_value

name	LOC100040172 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040172
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Lnp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69605 MGI:1918115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040519 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 90 ESTs, 6 Proteins

name	Evx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14029 MGI:95462
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15433 MGI:96205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15432 MGI:96204
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15431 MGI:96203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15430 MGI:96202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15438 MGI:96210
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15437 MGI:96209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700109F18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73429 MGI:1923875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Hoxd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15434 MGI:96207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15436 MGI:96208
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667804 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667804
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Hoxd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15429 MGI:96201
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53375 MGI:1859652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6430710C18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249838 GeneID:76218 MGI:1923468
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : RIKEN cDNA 6430710C18 gene transcript_id : XM_001474689.1

name	Sp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124001546 GeneID:20687 MGI:1277166
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : trans-acting transcription factor 3 transcript_id : NM_001018042.2

name	Gtpbp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76677912 GeneID:67059 MGI:1914309
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTP-binding protein 9 (putative) transcript_id : NM_025942.2

name	Gtpbp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76677914 GeneID:67059 MGI:1914309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTP-binding protein 9 (putative) transcript_id : NM_030091.1

name	Sp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52693932 GeneID:381373 MGI:3574660
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : trans-acting transcription factor 9 transcript_id : NM_001005343.1

name	1700023B02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350084 GeneID:66935 MGI:1914185
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700023B02 gene transcript_id : NM_025854.2

name	Scrn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61969659 GeneID:74616 MGI:1921866
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secernin 3 transcript_id : NM_029022.1

name	Gpr155 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123959715 GeneID:68526 MGI:1915776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 155 transcript_id : NM_001080707.1

name	Wipf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130115 GeneID:215280 MGI:2178801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WAS/WASL interacting protein family, member 1 transcript_id : NM_153138.3

name	Chrna1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802554 GeneID:11435 MGI:87885
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle) transcript_id : NM_007389.3

name	Chn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371256 GeneID:108699 MGI:1915674
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chimerin (chimaerin) 1 transcript_id : NM_175752.2

name	Chn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130637 GeneID:108699 MGI:1915674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chimerin (chimaerin) 1 transcript_id : NM_029716.2

name	Atf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68799838 GeneID:11909 MGI:109349
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : activating transcription factor 2 transcript_id : NM_009715.2

name	Atf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68799915 GeneID:11909 MGI:109349
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : activating transcription factor 2 transcript_id : NM_001025093.1

name	Atp5g3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348625 GeneID:228033 MGI:2442035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 3 transcript_id : NM_175015.2

name	LOC100040172 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249826 GeneID:100040172
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100040172 transcript_id : XM_001474208.1

name	Lnp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84872192 GeneID:69605 MGI:1918115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : limb and neural patterns transcript_id : NM_027133.2

name	LOC100040519 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249844 GeneID:100040519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 88 ESTs, 6 Proteins product : similar to L23 mitochondrial-related protein, transcript variant 2 transcript_id : XM_001475211.1

name	LOC100040519 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249842 GeneID:100040519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 89 ESTs, 6 Proteins product : similar to L23 mitochondrial-related protein, transcript variant 1 transcript_id : XM_001475192.1

name	Evx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131041 GeneID:14029 MGI:95462
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : even skipped homeotic gene 2 homolog transcript_id : NM_007967.2

name	Hoxd13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120586993 GeneID:15433 MGI:96205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D13 transcript_id : NM_008275.2

name	Hoxd12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121583907 GeneID:15432 MGI:96204
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D12 transcript_id : NM_008274.2

name	Hoxd11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680256 GeneID:15431 MGI:96203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D11 transcript_id : NM_008273.1

name	Hoxd10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802469 GeneID:15430 MGI:96202
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D10 transcript_id : NM_013554.3

name	Hoxd9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542960 GeneID:15438 MGI:96210
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D9 transcript_id : NM_013555.2

name	Hoxd8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112807183 GeneID:15437 MGI:96209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D8 transcript_id : NM_008276.2

name	1700109F18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94367053 GeneID:73429 MGI:1923875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 1700109F18 gene transcript_id : XM_992510.1

name	Hoxd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126517501 GeneID:15434 MGI:96207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D3 transcript_id : NM_010468.2

name	Hoxd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754237 GeneID:15436 MGI:96208
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D4 transcript_id : NM_010469.1

name	LOC667804 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94367058 GeneID:667804
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : similar to hCG17447 transcript_id : XM_992575.1

name	Hoxd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112983631 GeneID:15429 MGI:96201
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D1 transcript_id : NM_010467.2

name	Mtx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380213 GeneID:53375 MGI:1859652
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : metaxin 2 transcript_id : NM_016804.3

name	6430710C18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249839 GeneID:76218 MGI:1923468
definition	codon_start : 1 product : hypothetical protein LOC76218 protein_id : XP_001474739.1

name	Sp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:65301157 CCDS:CCDS16122.1 GeneID:20687 MGI:1277166
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IDA] [Evidence ISS]; GO:0003690 - double-stranded DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence TAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030183 - B cell differentiation [Evidence IMP]; GO:0030218 - erythrocyte differentiation [Evidence IMP]; GO:0030851 - granulocyte differentiation [Evidence IMP]; GO:0030224 - monocyte differentiation [Evidence IMP]; GO:0001779 - natural killer cell differentiation [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence TAS]; GO:0030217 - T cell differentiation [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : trans-acting transcription factor 3 isoform 1 protein_id : NP_001018052.1

name	Gtpbp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313144 CCDS:CCDS16124.1 GeneID:67059 MGI:1914309
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; GTP-binding protein PTD004 product : GTP-binding protein PTD004 isoform a protein_id : NP_080218.1

name	Gtpbp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76677915 CCDS:CCDS16125.1 GeneID:67059 MGI:1914309
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; GTP-binding protein PTD004 product : GTP-binding protein PTD004 isoform b protein_id : NP_084367.1

name	Sp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52693933 CCDS:CCDS16126.1 GeneID:381373 MGI:3574660
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : buttonhead-like zinc finger transcription factor Sp9 product : trans-acting transcription factor 9 protein_id : NP_001005343.1

name	1700023B02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385336 CCDS:CCDS16127.1 GeneID:66935 MGI:1914185
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0042826 - histone deacetylase binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0016564 - transcriptional repressor activity [Evidence ISS] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : CBF1 interacting corepressor protein_id : NP_080130.1

name	Scrn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61969660 CCDS:CCDS16128.1 GeneID:74616 MGI:1921866
definition	GO_function : GO:0016805 - dipeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : secernin 3 protein_id : NP_083298.1

name	Gpr155 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123959716 GeneID:68526 MGI:1915776
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 155 protein_id : NP_001074176.1

name	Wipf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346579 CCDS:CCDS16131.1 GeneID:215280 MGI:2178801
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IDA] GO_process : GO:0030048 - actin filament-based movement [Evidence IDA] codon_start : 1 note : WASP interacting protein product : Wiskott-Aldrich syndrome protein interacting protein protein_id : NP_694778.1

name	Chrna1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542391 CCDS:CCDS16132.1 GeneID:11435 MGI:87885
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : acetylcholine receptor alpha; cholinergic receptor nicotinic alpha polypeptide 1 (muscle) product : cholinergic receptor, nicotinic, alpha 1 (muscle) protein_id : NP_031415.2

name	Chn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28461137 CCDS:CCDS16133.1 GeneID:108699 MGI:1915674
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1; chimaerin product : chimerin (chimaerin) 1 isoform 1 protein_id : NP_786928.1

name	Chn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386436 GeneID:108699 MGI:1915674
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; chimaerin product : chimerin (chimaerin) 1 isoform 2 protein_id : NP_083992.1

name	Atf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68799916 CCDS:CCDS16134.1 GeneID:11909 MGI:109349
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : activating transcription factor 2 isoform 1 protein_id : NP_001020264.1

name	Atf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468883 CCDS:CCDS16135.1 GeneID:11909 MGI:109349
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : activating transcription factor 2 isoform 2 protein_id : NP_033845.1

name	Atp5g3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27923925 CCDS:CCDS16136.1 GeneID:228033 MGI:2442035
definition	GO_component : GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA] GO_process : GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 3 protein_id : NP_778180.1

name	LOC100040172 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249827 GeneID:100040172
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474258.1

name	Lnp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32441290 CCDS:CCDS16137.1 GeneID:69605 MGI:1918115
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA] codon_start : 1 note : lunapark product : limb and neural patterns protein_id : NP_081409.1

name	LOC100040519 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249843 GeneID:100040519
definition	codon_start : 1 product : similar to L23 mitochondrial-related protein isoform 1 protein_id : XP_001475242.1

name	LOC100040519 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249845 GeneID:100040519
definition	codon_start : 1 product : similar to L23 mitochondrial-related protein isoform 2 protein_id : XP_001475261.1

name	Evx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679713 CCDS:CCDS16138.1 GeneID:14029 MGI:95462
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : even skipped homeotic gene 2 homolog protein_id : NP_031993.1

name	Hoxd13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120586994 CCDS:CCDS16139.1 GeneID:15433 MGI:96205
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeobox D13 protein_id : NP_032301.2

name	Hoxd12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121583908 GeneID:15432 MGI:96204
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D12 protein_id : NP_032300.2

name	Hoxd11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680257 CCDS:CCDS16140.1 GeneID:15431 MGI:96203
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0001759 - induction of an organ [Evidence IGI]; GO:0001656 - metanephros development [Evidence IGI]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D11 protein_id : NP_032299.1

name	Hoxd10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560501 CCDS:CCDS16141.1 GeneID:15430 MGI:96202
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D10 protein_id : NP_038582.2

name	Hoxd9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305153 CCDS:CCDS16142.1 GeneID:15438 MGI:96210
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D9 protein_id : NP_038583.1

name	Hoxd8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112807184 CCDS:CCDS16143.1 GeneID:15437 MGI:96209
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D8 protein_id : NP_032302.2

name	1700109F18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94367054 GeneID:73429 MGI:1923875
definition	codon_start : 1 product : hypothetical protein LOC73429 protein_id : XP_997604.1

name	Hoxd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754238 CCDS:CCDS16145.1 GeneID:15436 MGI:96208
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : homeo box D4 protein_id : NP_034599.1

name	Hoxd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126517502 GeneID:15434 MGI:96207
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D3 protein_id : NP_034598.2

name	LOC667804 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94367059 GeneID:667804
definition	codon_start : 1 product : similar to hCG17447 protein_id : XP_997669.1

name	Hoxd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112983632 CCDS:CCDS16147.1 GeneID:15429 MGI:96201
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D1 protein_id : NP_034597.2

name	Mtx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543274 CCDS:CCDS16148.1 GeneID:53375 MGI:1859652
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0019867 - outer membrane [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : metaxin 2 protein_id : NP_058084.2

name	LOC620110 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249840 GeneID:620110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 152 ESTs, 12 Proteins product : similar to 60S ribosomal protein L7a (Surfeit locus protein 3) pseudo : _no_value transcript_id : XR_031929.1

name	LOC667729 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249824 GeneID:667729
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 16 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase pseudo : _no_value transcript_id : XR_031598.1

clone name	MSMg01-401H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261O24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-149G24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-304K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512P08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-478N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270M10
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-344M04.b	B6Ng01-344M04.g
ACC	GA127161	GA127162
length	1,145	1,170
definition	B6Ng01-344M04.b	B6Ng01-344M04.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(73,559,282 - 73,560,445)	(73,698,236 - 73,699,403)
sequence	gaattctgaacactgagacagatgagctgcactacagacattaagacaca cagagctctgtagaaacacattttaccataagtattccttttatggtaat cccaaactttgctgtgaataattacattacttacaaaaacactataatcc acataattaaatttatatatatacttacagtaagatttccaaacaggagg tctatattcatctgtatctgaaagaataaattatcaaattagtattactg aatagttatatttaaataagatgcttcactcactaaatcactcagtacat aaaccgtgctctatcctagtgctaggctctaaaaatgcattcaaagattt ttttttttagccttgatccttattttcttaaaaatacttttaaaaagata ttccaaaaagttatggtatctattcagttacacagcataaaaaaaaaaaa tcacagtaaatttttactttccataatcatttcttatagctatcaaataa tagtcagtaaagctcctgttgatttaggcgtaatgctcatttcaccaaaa aaattcctcaaatcattggaatttttcctctctagtccaatttactacat aatgttaaccttcacagatattcctttgtttttccccattgctttttcgg aattcatgtacaactagttaattaccaacaagaagagaggagagtacaat gaacagatcccagtcctcaaatgtcccggacaatcaaaaccaggaaatga gaaatgctcccatggaagagaatgtccccaggggccaacaaagaacagga tgtgaacatctgctcttcaagtccatttccttcactccctagagtttaag gaggcagtgaaggagatggaaatcaggcatatgaagggaatgggataaag taacaagagataggcaaacggccacctgtgctctaaaacctcacagacca gggacagttaaggagtcgttgccagccaaagcctctgcaagcctggagag ccacagagtatctctagcggtgggaagatgtggcattgccgcaccttgct ctgctagtatctagagacccataggaaatcttgtccccacgagcagaaaa tctgaaagttatgagtaacctggcctgaagtaaatgatcatagat	gaattcatttcatagcaagttcctttatttcccctgcccagatgccattt aaagtagcttggtgaggaaatgtttctggtcgtgtgacagttggatcaaa tttgacaattggacaaataaaaaaaagaaactacatatttctattgtggc tgaagtataaaatgattaatgaggagctcagagagatagggaaaaaaatc ttttttttttaaagattattttatgtatatgggtacactgtagctgaaca gatggttgtgagccttcatgtggttgttgggaaatgaatttttaggacct ctgcttgctctggtcgactgtgcttgctcagtccctgcttgctccgggcc aaagaattttttattatgatacataagtatattgtagctgtcttcaggtg cacgggtgttagatctcattaccagtggttgtgagccaccatgtggttgt ttgaactaaggaccttcagaagaacagtcagtgctcttaaccactgggcc atcttgccagcccctggaaaaaatcttaactgtagaatgtatgttggttt attcacagagcaatatgaagcaagaaaactagaagataataatggtcaaa atgaaagatggacgcacaagaaatagacttttatatctgatttggagctg tagtttacacacattttttaaaagttaagagtaaaaagtaaaaccttaaa ttctttgaaactaaaatttagagtatgattttcattcccactgactagat ttactctctggtaaaccaaatttactttttaggatttggtacaaagttaa agaagagatatggggtagtaattgacttcgtgtgcttatctgtgggtggg cacctgcatgtcatggttgcacatttggaggtcagaggacagtttatagg agtcaggctctttctagcatatgctgtcagacttgggcagcaaagacttt tccctggtgactcataatgttagaagcttttactccatgctcagttaacc ttgtttctttaggagcctgtaatatcagggaagtataaaaacaagacagt atttaaagggaaggcgagctagagcaacttaactactcacatctaaggat gcagaacccaccagttccttcaaggtcatacccgaattggctgagggaac ctctcaaggcacggtatgac
quality values	Open. Hide. 62 49 39 39 62 62 59 44 62 62 43 44 62 62 62 54 62 59 59 59 62 59 59 62 62 62 62 62 59 62 62 59 59 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 59 62 56 59 62 56 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 58 54 58 58 46 36 46 58 46 45 58 58 46 58 58 54 58 58 58 58 54 58 58 58 58 58 58 54 58 58 58 58 58 58 54 54 58 54 54 54 58 58 54 45 42 58 58 58 58 54 54 58 52 58 52 58 58 58 58 58 51 49 58 58 58 58 58 58 54 52 53 53 53 58 53 51 46 58 58 58 58 58 49 58 54 58 58 58 58 49 58 58 54 43 58 49 58 58 58 58 58 58 58 54 49 40 51 49 41 58 50 41 58 58 51 52 51 46 58 58 49 41 54 58 58 50 50 51 58 41 51 46 39 49 58 41 49 54 58 54 40 58 35 47 49 58 58 32 58 52 50 29 47 52 58 50 54 51 49 40 47 42 49 47 40 54 49 37 52 39 39 51 47 42 39 54 54 52 51 42 39 54 50 44 46 22 23 41 54 45 42 31 54 51 49 44 44 40 42 51 51 54 53 42 53 53 32 54 54 45 30 42 31 53 53 53 46 27 40 33 47 51 47 25 46 18 53 40 35 53 34 33 52 40 32 31 31 47 49 52 32 40 30 32 34 31 51 40 23 42 42 25 34 23 51 31 22 42 31 37 36 33 31 29 42 31 36 42 31 30 30 29 31 31 30 33 43 31 16 31 32 31 51 42 31 31 26 30 32 23 29 26 16 46 31 32 32 32 42 29 31 46 30 25 46 24 42 31 29 41 30 31 31 31 42 30 27 24 20 27 24 33 24 32 31 30 46 31 34 32 19 24 23 16 20 43 33 27 29 26 30 31 47 37 22 21 24 27 47 28 25 18 33 46 31 29 31 21 21 32 15 21 27 32 16 22 17 32 22 30 30 25 41 25 22 21 31 6 14 15 6 11 25 27 22 32 25 31 33 34 31 44 44 30 23 32 31 33 30 27 31 21 37 17 33 20 9 44 32 23 23 32 34 17 25 10 17 7 6 17 19 32 32 27 27 7 11 10 15 19 24 30 18 15 30 22 19 14 18 22 16 25 34 27 13 17 20 17 14 18 28 12 34 14 30 12 19 23 14 12 6 12 20 10 17 16 15 24 28 27 26 23 11 6 6 14 11 13 34 18 22 19 15 28 13 27 20 10 9 3 4 22 25 18 17 18 20 16 11 7 28 7 7 13 5 3 12 16 27 27 24 24 8 10 21 20 24 9 28 6 11 5 14 14 28 18 7 13 7 8 12 9 28 9 4 6 19 8 18 16 14 12 30 17 6 5 4 8 4 8 11 12 18 17 23 20 15 23 6 6 3 16 8 9 17 12 10 8 11 10 13 5 3 17 8 14 8 8 1 2 5 5 5 9 13 6 13 14 28 17 4 9 6 4 21 5 12 9 5 18 13	Open. Hide. 49 35 50 59 59 28 44 44 59 59 59 43 59 59 40 46 51 46 54 54 59 62 62 62 62 59 62 62 62 62 62 62 62 54 54 62 59 62 59 59 48 54 62 62 62 59 59 62 62 59 59 56 54 54 62 59 49 62 62 59 62 48 48 62 62 59 56 62 62 59 54 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 59 59 51 50 59 59 62 56 59 62 56 59 59 59 62 62 59 56 62 59 59 59 62 62 62 59 54 62 56 56 56 62 56 54 59 62 59 62 59 62 56 62 59 59 62 62 62 59 51 59 59 62 59 62 62 62 56 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 56 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 56 56 48 56 46 50 50 56 62 56 62 59 59 59 50 62 59 62 62 56 56 62 59 62 62 59 62 62 62 59 59 50 56 62 59 59 54 56 62 62 59 62 62 62 59 62 62 54 56 59 62 56 56 62 62 62 62 59 59 62 62 62 62 54 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 51 59 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 56 59 56 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 44 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 56 56 56 56 56 56 62 62 62 62 56 62 62 62 62 62 62 56 62 62 56 62 62 56 62 62 56 62 62 56 62 56 56 62 62 62 56 62 56 62 62 56 62 56 56 47 62 49 62 62 62 62 62 56 47 62 62 56 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 52 62 62 62 62 62 62 58 54 58 52 54 58 58 58 58 58 58 43 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 45 54 54 54 58 58 58 58 58 58 58 58 54 54 54 58 58 52 58 49 54 58 52 58 58 52 58 54 58 58 58 58 58 58 58 58 58 58 58 58 45 51 58 58 54 58 58 49 58 46 47 48 58 58 58 58 58 58 50 54 58 58 58 51 51 58 58 58 58 50 51 35 58 58 46 48 49 58 50 51 47 58 43 58 58 51 50 51 50 51 50 53 58 58 37 52 52 50 39 53 54 46 51 32 58 49 58 48 58 32 51 58 50 49 41 42 51 58 50 52 53 54 52 58 46 41 52 58 58 58 58 53 39 58 58 46 24 29 43 40 51 37 58 39 53 39 58 58 58 58 39 39 50 54 54 25 33 54 41 47 41 54 47 47 51 53 40 54 54 50 47 51 53 42 45 28 54 54 30 31 54 52 53 37 54 39 37 41 37 45 53 32 54 54 54 37 32 45 51 53 54 53 32 42 29 37 35 33 40 40 26 31 30 54 32 31 41 52 53 45 42 40 53 49 21 33 54 44 26 34 28 51 32 29 49 42 34 43 43 52 51 53 53 40 28 32 21 15 52 52 32 51 32 24 34 14 47 33 31 35 40 24 49 14 26 52 53 31 52 28 32 18 13 28 33 51 51 24 36 35 30 34 30 30 30 33 34 31 31 30 37 51 24 31 43 28 32 31 33 38 34 32 42 33 51 26 31 51 51 28 42 48 32 28 21 31 30 27 28 31 26 28 38 28 30 31 34 28 27 9 6 9 19 30 30 28 31 47 42 32 35 39 27 27 18 36 31 18 46 15 27 31 11 6 10 31 35 24 11 7 12 25 31 31 24 32 34 31 31 37 17 31 31 17 48 6 8 26 34 33 34 33 34 34 38 37 26 28 39 30 34 20 16 36 16 26 35 21 41 11 24 31 29 28 25 47 22 11 33 28 34 48 48 31 22 48 30 17 20 29 9 32 32 27 31 19 19 33 26 25 24 31 14 22 25 13 14 33 18 21 32 40 48 23 13 19 23 21 32 9 21 34 18 12 27 24 27 24 22 26 16 25 10 13 7 8 11 43 12 6 5 24 31 10 5 5 16 10 25 23 22 33 11 6 5 12 9 21 9 30 15 43 26 20 33 10 21 6 14 9 30 28 31 10 9 5 15 10 7 3 9 11 4 5 6 6 3 5 10 6 7 34 10 15 8 11 21 7 27 5 4 18 8 8 5 10 10 15 10 5 4 7 18 6 13 28 8 7 24 6 3 4 11 18 27 15 5 30 19 9 6 30 7 23 13 8 5 15 6 4 7 13 8 13 28 5 12 7 5 28 13 6 6 5 5 7 7 16 5 14 11 10 6 21 7 3 1 3 14 5 8 17 10 5 4 6 4 4 8 15 4 7 20 10 7 6 10 14 5 7 14 3 3 1 6 4 4 4 5 9 12 16 11

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_73559282_73560445
seq2: B6Ng01-344M04.b_50_1194

seq1  GAATTCTGAACACTGAGACAGATGAGCTGCACTACAGACATTAAGACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAACACTGAGACAGATGAGCTGCACTACAGACATTAAGACACA  50

seq1  CAGAGCTCTGTAGAAACACATTTTACCATAAGTATTCCTTTTATGGTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTCTGTAGAAACACATTTTACCATAAGTATTCCTTTTATGGTAAT  100

seq1  CCCAAACTTTGCTGTGAATAATTACATTACTTACAAAAACACTATAATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACTTTGCTGTGAATAATTACATTACTTACAAAAACACTATAATCC  150

seq1  ACATAATTAAATTTATATATATACTTACAGTAAGATTTCCAAACAGGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATTAAATTTATATATATACTTACAGTAAGATTTCCAAACAGGAGG  200

seq1  TCTATATTCATCTGTATCTGAAAGAATAAATTATCAAATTAGTATTACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATTCATCTGTATCTGAAAGAATAAATTATCAAATTAGTATTACTG  250

seq1  AATAGTTATATTTAAATAAGATGCTTCACTCACTAAATCACTCAGTACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTATATTTAAATAAGATGCTTCACTCACTAAATCACTCAGTACAT  300

seq1  AAACCGTGCTCTATCCTAGTGCTAGGCTCTAAAAATGCATTCAAAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCGTGCTCTATCCTAGTGCTAGGCTCTAAAAATGCATTCAAAGATTT  350

seq1  TTTTTTTTAGCCTTGATCCTTATTTTCTTAAAAATACTTTTAAAAAGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAGCCTTGATCCTTATTTTCTTAAAAATACTTTTAAAAAGATA  400

seq1  TTCCAAAAAGTTATGGTATCTATTCAGTTACACAGCATAAAAAAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAAAAGTTATGGTATCTATTCAGTTACACAGCATAAAAAAAAAAAA  450

seq1  TCACAGTAAATTTTTACTTTCCATAATCATTTCTTATAGCTATCAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTAAATTTTTACTTTCCATAATCATTTCTTATAGCTATCAAATAA  500

seq1  TAGTCAGTAAAGCTCCTGTTGATTTAGGCGTAATGCTCATTTCACCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAGTAAAGCTCCTGTTGATTTAGGCGTAATGCTCATTTCACCAAAA  550

seq1  AAATTCCTCAAATCATTGGAATTTTTCCTCTCTAGTCCAATTTACTACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCTCAAATCATTGGAATTTTTCCTCTCTAGTCCAATTTACTACAT  600

seq1  AATGTTAACCTTCACAGATATTCCTTTGTTTTTCCCCATTGCTTTTTCGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTAACCTTCACAGATATTCCTTTGTTTTTCCCCATTGCTTTTTCGG  650

seq1  AATTCATGTACAACTAGTTAATTACCAACAAGAAGAGAGGAGAGTACAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATGTACAACTAGTTAATTACCAACAAGAAGAGAGGAGAGTACAAT  700

seq1  GAACAGATCCCAGTCCTCAAATGTCCCGGACAATCAAAACCAGGAAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGATCCCAGTCCTCAAATGTCCCGGACAATCAAAACCAGGAAATGA  750

seq1  GAAATGCTCCCATGGAAGAGAATGTCCCCAGGGGCCAACAAAGAACAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCTCCCATGGAAGAGAATGTCCCCAGGGGCCAACAAAGAACAGGA  800

seq1  TGTGAACATCTGCTCTTCAAGTCCATTTCCTTCACTCCCTAGAGTTTAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACATCTGCTCTTCAAGTCCATTTCCTTCACTCCCTAGAGTTTAAG  850

seq1  GAGGCAGTGAAGGAGATGGAAATCAGGCATATGAAGGGAATGGGATAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGTGAAGGAGATGGAAATCAGGCATATGAAGGGAATGGGATAAAG  900

seq1  TAACAAGAGATAGGCAAACGGCCAACTGTGCTCTAAAACCTCACAGACCA  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAACAAGAGATAGGCAAACGGCCACCTGTGCTCTAAAACCTCACAGACCA  950

seq1  GGGACAGTTAAGGAGTCGTTTGCCAGCCAAAGCCTCTGCAAGCCTGGAGA  1000
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGGACAGTTAAGGAGTCG-TTGCCAGCCAAAGCCTCTGCAAGCCTGGAGA  999

seq1  GCCACAGAGTATCTCTAGC-GTGGGAAGATGTGGCCATTTGCCGCACCTG  1049
      ||||||||||||||||||| |||||||||||||||   ||||||||||| 
seq2  GCCACAGAGTATCTCTAGCGGTGGGAAGATGTGGC--ATTGCCGCACCTT  1047

seq1  GCTCTGCTAGTATCTAAGAAGAACCCATTAGGAAATCTTGTCCCCAACGA  1099
      ||||||||||||||| |||   ||||| ||||||||||||||||| ||| 
seq2  GCTCTGCTAGTATCT-AGA--GACCCA-TAGGAAATCTTGTCCCC-ACG-  1091

seq1  AGCAAGAAAAATCCTGGAAAGTTTATTGAGGTTAAACCTGGCGCTGAAGT  1149
      ||||   ||||||   |||||||   ||||    |||||||| |||||||
seq2  AGCA--GAAAATC--TGAAAGTT--ATGAG---TAACCTGGC-CTGAAGT  1131

seq1  AAAATGATCATAGAT  1164
       ||||||||||||||
seq2  -AAATGATCATAGAT  1145

seq1: chr2_73698236_73699403
seq2: B6Ng01-344M04.g_69_1238 (reverse)

seq1  GTCATACGTGGGCCTGGAGAGG-TCCCTCAGCCATTTGGGGTATGACCTT  49
      |||||||  | |||| |||||| ||||||||||| || ||||||||||||
seq2  GTCATAC-CGTGCCTTGAGAGGTTCCCTCAGCCAATTCGGGTATGACCTT  49

seq1  GAAGGGGACTGGGTGTGTCTGCATTCTTTGATGTGAGTAGTTAAGTTTTG  99
      ||| || |||||  |  ||||||| ||| ||||||||||||||||  |||
seq2  GAA-GGAACTGGTGGGTTCTGCATCCTTAGATGTGAGTAGTTAAG--TTG  96

seq1  CTCTAGCTTCCGCCTTCCCTTTCAATACTGTCTTG-TTTTATACTTCCCT  148
      ||||||||  |||||||||||| |||||||||||| ||||||||||||| 
seq2  CTCTAGCT--CGCCTTCCCTTTAAATACTGTCTTGTTTTTATACTTCCC-  143

seq1  TGATA-TACAGGCTC--TAAGAAACAGGGTTAACTGAGCATGGAGTAAAA  195
      ||||| |||||||||   |||||||| |||||||||||||||||||||||
seq2  TGATATTACAGGCTCCTAAAGAAACAAGGTTAACTGAGCATGGAGTAAAA  193

seq1  GCTTCTAACATTATGAGTCACCAGGGAAAAGTCTTTGCTG-CCAAGTCTG  244
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCTTCTAACATTATGAGTCACCAGGGAAAAGTCTTTGCTGCCCAAGTCTG  243

seq1  ACAGCATATGCTAG-AAGAGCCTGACTCCTATAAACTGTCCTCTGACCTC  293
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACAGCATATGCTAGAAAGAGCCTGACTCCTATAAACTGTCCTCTGACCTC  293

seq1  CAAATGTGC-ACCATGACATGCAGGTGCCCACCCACAGATAAGCACACGA  342
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTGCAACCATGACATGCAGGTGCCCACCCACAGATAAGCACACGA  343

seq1  AGTCAATTACTA-CCCATATCTCTTCTTTAACTTTGTACCAAATCCTAAA  391
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGTCAATTACTACCCCATATCTCTTCTTTAACTTTGTACCAAATCCTAAA  393

seq1  AAGTAAATTTGGTTTACCAGAGAGTAAATCTAGTCAGTGGGAATGAAAAT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATTTGGTTTACCAGAGAGTAAATCTAGTCAGTGGGAATGAAAAT  443

seq1  CATACTCTAAATTTTAGTTTCAAAGAATTTAAGGTTTTACTTTTTACTCT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTCTAAATTTTAGTTTCAAAGAATTTAAGGTTTTACTTTTTACTCT  493

seq1  TAACTTTTAAAAAATGTGTGTAAACTACAGCTCCAAATCAGATATAAAAG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTTAAAAAATGTGTGTAAACTACAGCTCCAAATCAGATATAAAAG  543

seq1  TCTATTTCTTGTGCGTCCATCTTTCATTTTGACCATTATTATCTTCTAGT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTCTTGTGCGTCCATCTTTCATTTTGACCATTATTATCTTCTAGT  593

seq1  TTTCTTGCTTCATATTGCTCTGTGAATAAACCAACATACATTCTACAGTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGCTTCATATTGCTCTGTGAATAAACCAACATACATTCTACAGTT  643

seq1  AAGATTTTTTCCAGGGGCTGGCAAGATGGCCCAGTGGTTAAGAGCACTGA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTTTCCAGGGGCTGGCAAGATGGCCCAGTGGTTAAGAGCACTGA  693

seq1  CTGTTCTTCTGAAGGTCCTTAGTTCAAACAACCACATGGTGGCTCACAAC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTTCTGAAGGTCCTTAGTTCAAACAACCACATGGTGGCTCACAAC  743

seq1  CACTGGTAATGAGATCTAACACCCGTGCACCTGAAGACAGCTACAATATA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTAATGAGATCTAACACCCGTGCACCTGAAGACAGCTACAATATA  793

seq1  CTTATGTATCATAATAAAAAATTCTTTGGCCCGGAGCAAGCAGGGACTGA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTATCATAATAAAAAATTCTTTGGCCCGGAGCAAGCAGGGACTGA  843

seq1  GCAAGCACAGTCGACCAGAGCAAGCAGAGGTCCTAAAAATTCATTTCCCA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCACAGTCGACCAGAGCAAGCAGAGGTCCTAAAAATTCATTTCCCA  893

seq1  ACAACCACATGAAGGCTCACAACCATCTGTTCAGCTACAGTGTACCCATA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCACATGAAGGCTCACAACCATCTGTTCAGCTACAGTGTACCCATA  943

seq1  TACATAAAATAATCTTTAAAAAAAAAAGATTTTTTTCCCTATCTCTCTGA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAAATAATCTTTAAAAAAAAAAGATTTTTTTCCCTATCTCTCTGA  993

seq1  GCTCCTCATTAATCATTTTATACTTCAGCCACAATAGAAATATGTAGTTT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCATTAATCATTTTATACTTCAGCCACAATAGAAATATGTAGTTT  1043

seq1  CTTTTTTTTATTTGTCCAATTGTCAAATTTGATCCAACTGTCACACGACC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTTATTTGTCCAATTGTCAAATTTGATCCAACTGTCACACGACC  1093

seq1  AGAAACATTTCCTCACCAAGCTACTTTAAATGGCATCTGGGCAGGGGAAA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACATTTCCTCACCAAGCTACTTTAAATGGCATCTGGGCAGGGGAAA  1143

seq1  TAAAGGAACTTGCTATGAAATGAATTC  1168
      |||||||||||||||||||||||||||
seq2  TAAAGGAACTTGCTATGAAATGAATTC  1170

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BAC

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Alignment Information