BAC Information

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BAC

Clone NameB6Ng01-345M22
Chromosome2 (Build37)
Map Location 70,793,436 - 70,911,877
singlet/doubletdoublet
Overlap geneMettl8, 4833418A01Rik
Upstream geneMyo3b, LOC100040021, Sp5, 4933404M02Rik, LOC100040068, Gad1, LOC100039766, Gorasp2, Tlk1
Downstream geneCybrd1, Dync1i2, Slc25a12, LOC667528, Hat1, LOC100040177, Metapl1, LOC100040207, Dlx1, Dlx1as, Dlx2, Gm1631, Itga6, Pdk1, Rapgef4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345M22.bB6Ng01-345M22.g
ACCGA127885GA127886
length1,1371,048
definitionB6Ng01-345M22.b B6Ng01-345M22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,910,714 - 70,911,877)(70,793,436 - 70,794,479)
sequence
gaattctaagtacattatctgacagtcagtattacaggatttttttttta
aaaaggctatgttttacattaagcactagcaggaacttgccaaaaaagca
aacaaaattgttgcttcttattatagttgtttttttaaaaaatatgtcat
gtcctgtgataaaaacagaaaatatgagaaaaaaaatctgtatttataaa
aatgttcaaatattttctaaggatttccttatcagtcaccaacagaaata
gtttcctgataggtagtcctaggccttataaggcctagtaaattctcggt
catgttttttttaattaaacagggtctcactatgcagccgtggctggcct
ggatctcagagatcctcctgcttctgcaagtgctgggattaaggccttga
accattatcctgaccaattctagacgattctttaaagagaacagctgagg
gtgaggcttagcactagagcactgtaggcagacatggatcaatgatctcc
agtacccaaaagtagatacaaaatagagagaagcccatatgagtagtctg
ctcaaatttaaacagcacttgctttcacaagtgtgcaaatgccaaggaca
cacgtgccaaatgctgcggacctggcgagccgctgcggagcctttgttct
gagccgacttcactgcgatgacctcctgaggtgtgtcccagctcaggtac
cttttgaaggaatggagaggaatttaacatttggatcaggtcccttagac
tcaaaattgaaacattacactttatttacttatctattgttattttacat
gcttggttttggggataaaatccggcctgtgactctttaggtagcccagg
ctaatgctgaacttgctgttctatttctgagtatctccagtgctgagatg
accggcatgaaccaccatgcttggtgtgctattttataattaagtttttt
ttaataacttaattatatgagcaaagtaatctattttgaaacaatactta
tatttcttagatctatatggatacatctcactaatttatcctcatgatta
tgaaatcctgacagtagatgtatctggagaattcatcttaggtgagctat
catcccagagtcatagaatatgcactcactgaataag
gaattcagttgggagccgctcttgccccgatcttccctgaccttgcgttt
ccctttgagacactggagcagtacttagctgatctgtggccatgcctttc
tctctcgagggcccttgcttctgctggtcaccatctctagtagcgggctc
tgtaccactccgctaatctggcatgcgtcttcacctggatttttacctac
gccgtgtgtgaggtctcccttggtagaggtgaccccttgtgaataggtat
ttatttgccatctctattgcagatcaccctttagaaaggtgacgcccact
accgacagagcggagccctctgatttgctgctccccacccgcccctctct
acttcctttccattcactatccaactttctcatccccaacttccaatgta
gaaaacagcataagtgttaatacctggataggctccagcacatctctttg
gaaagttacagacacaataacaaactatgaatacgattcctccagtaggc
tgatcccagaggtcattctttcttctcttttaaataatttttaataattt
tagaattattttcgattgcttttagatttatttattttactttacttcat
gcgagtgttttgcccgcgtgtatgtccatgcaccacacgtgtctgctgct
caagggggtcagaagcaggtgttagatggcctgaaactgaagttacagat
ggttgtgagccaccatgtgggtgctgggaatcgaacctgggtcctctgca
atggcagcaagtgatcttaaccacagaagccatttctccagtcccaccca
ctcctagtacattctattcctatgtaaacatcaatacggaatagagtggt
acaactcgaataacactgtgccacagtgaagaaagtatagatgggctttt
aaaacttacatgacgtaaactgggccggggtggcacacactttaatccca
gcactttgggagacagaggcaggcagatttctgagttcgaggtcagctcg
ggtctacaaagtggagtttcaggacagccaggactattaaaaacaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_70910714_70911877
seq2: B6Ng01-345M22.b_46_1182 (reverse)

seq1  CTTA-TCAGTGAGTGCATATCTAATGACTTCTTTTGTGATTGGATTACCT  49
      |||| |||||||||||||||   |||||    | || |||  || || ||
seq2  CTTATTCAGTGAGTGCATATTCTATGAC----TCTGGGAT--GA-TAGCT  43

seq1  CACTAAGGATGATATCCTCCAGATACATCTACTTGTCCAAGAATTTCATA  99
      |||  | ||||| || |||||||||||||||| ||||  || ||||||||
seq2  CACCTAAGATGA-ATTCTCCAGATACATCTAC-TGTC--AGGATTTCATA  89

seq1  AATTCATGAAGAATTAAAATTTAAGTTGAGATGTATCCATATAAGGATCT  149
      |  |||||| ||  ||||  |||   |||||||||||||||||  |||||
seq2  A--TCATGAGGA--TAAA--TTA--GTGAGATGTATCCATATA--GATCT  129

seq1  AAGGAAATTATTAAAGTTATTTGTTTCAAAATAGATTACTTTGCTCATAT  199
      |||  || |||  ||||   ||||||||||||||||||||||||||||||
seq2  AAG--AAATAT--AAGT--ATTGTTTCAAAATAGATTACTTTGCTCATAT  173

seq1  AATTTAAGTTATTAAAAAAACCTTAATTATAAAATAGCACACCAAGCATG  249
      || ||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AA-TTAAGTTATTAAAAAAAACTTAATTATAAAATAGCACACCAAGCATG  222

seq1  GTGGTTCATGCCGGTCATCTCAGCACTGGAGATACTCAGAAATAGAACAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTCATGCCGGTCATCTCAGCACTGGAGATACTCAGAAATAGAACAG  272

seq1  CAAGTTCAGCATTAGCCTGGGCTACCTAAAGAGTCACAGGCCGGATTTTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCAGCATTAGCCTGGGCTACCTAAAGAGTCACAGGCCGGATTTTA  322

seq1  TCCCCAAAACCAAGCATGTAAAATAACAATAGATAAGTAAATAAAGTGTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAAACCAAGCATGTAAAATAACAATAGATAAGTAAATAAAGTGTA  372

seq1  ATGTTTCAATTTTGAGTCTAAGGGACCTGATCCAAATGTTAAATTCCTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCAATTTTGAGTCTAAGGGACCTGATCCAAATGTTAAATTCCTCT  422

seq1  CCATTCCTTCAAAAGGTACCTGAGCTGGGACACACCTCAGGAGGTCATCG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCTTCAAAAGGTACCTGAGCTGGGACACACCTCAGGAGGTCATCG  472

seq1  CAGTGAAGTCGGCTCAGAACAAAGGCTCCGCAGCGGCTCGCCAGGTCCGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAAGTCGGCTCAGAACAAAGGCTCCGCAGCGGCTCGCCAGGTCCGC  522

seq1  AGCATTTGGCACGTGTGTCCTTGGCATTTGCACACTTGTGAAAGCAAGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTGGCACGTGTGTCCTTGGCATTTGCACACTTGTGAAAGCAAGTG  572

seq1  CTGTTTAAATTTGAGCAGACTACTCATATGGGCTTCTCTCTATTTTGTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTAAATTTGAGCAGACTACTCATATGGGCTTCTCTCTATTTTGTAT  622

seq1  CTACTTTTGGGTACTGGAGATCATTGATCCATGTCTGCCTACAGTGCTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTTGGGTACTGGAGATCATTGATCCATGTCTGCCTACAGTGCTCT  672

seq1  AGTGCTAAGCCTCACCCTCAGCTGTTCTCTTTAAAGAATCGTCTAGAATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTAAGCCTCACCCTCAGCTGTTCTCTTTAAAGAATCGTCTAGAATT  722

seq1  GGTCAGGATAATGGTTCAAGGCCTTAATCCCAGCACTTGCAGAAGCAGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGATAATGGTTCAAGGCCTTAATCCCAGCACTTGCAGAAGCAGGA  772

seq1  GGATCTCTGAGATCCAGGCCAGCCACGGCTGCATAGTGAGACCCTGTTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTCTGAGATCCAGGCCAGCCACGGCTGCATAGTGAGACCCTGTTTA  822

seq1  ATTAAAAAAAACATGACCGAGAATTTACTAGGCCTTATAAGGCCTAGGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAAAAACATGACCGAGAATTTACTAGGCCTTATAAGGCCTAGGAC  872

seq1  TACCTATCAGGAAACTATTTCTGTTGGTGACTGATAAGGAAATCCTTAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTATCAGGAAACTATTTCTGTTGGTGACTGATAAGGAAATCCTTAGA  922

seq1  AAATATTTGAACATTTTTATAAATACAGATTTTTTTTCTCATATTTTCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTGAACATTTTTATAAATACAGATTTTTTTTCTCATATTTTCTG  972

seq1  TTTTTATCACAGGACATGACATATTTTTTAAAAAAACAACTATAATAAGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATCACAGGACATGACATATTTTTTAAAAAAACAACTATAATAAGA  1022

seq1  AGCAACAATTTTGTTTGCTTTTTTGGCAAGTTCCTGCTAGTGCTTAATGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAATTTTGTTTGCTTTTTTGGCAAGTTCCTGCTAGTGCTTAATGT  1072

seq1  AAAACATAGCCTTTTTAAAAAAAAAATCCTGTAATACTGACTGTCAGATA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATAGCCTTTTTAAAAAAAAAATCCTGTAATACTGACTGTCAGATA  1122

seq1  ATGTACTTAGAATTC  1164
      |||||||||||||||
seq2  ATGTACTTAGAATTC  1137

seq1: chr2_70793436_70794479
seq2: B6Ng01-345M22.g_67_1114

seq1  GAATTCAGTTGGGAGCCGCTCTTGCCCCGATCTTCCCTGACCTTGCGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTGGGAGCCGCTCTTGCCCCGATCTTCCCTGACCTTGCGTTT  50

seq1  CCCTTTGAGACACTGGAGCAGTACTTAGCTGATCTGTGGCCATGCCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGAGACACTGGAGCAGTACTTAGCTGATCTGTGGCCATGCCTTTC  100

seq1  TCTCTCGAGGGCCCTTGCTTCTGCTGGTCACCATCTCTAGTAGCGGGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCGAGGGCCCTTGCTTCTGCTGGTCACCATCTCTAGTAGCGGGCTC  150

seq1  TGTACCACTCCGCTAATCTGGCATGCGTCTTCACCTGGATTTTTACCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCACTCCGCTAATCTGGCATGCGTCTTCACCTGGATTTTTACCTAC  200

seq1  GCCGTGTGTGAGGTCTCCCTTGGTAGAGGTGACCCCTTGTGAATAGGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTGTGTGAGGTCTCCCTTGGTAGAGGTGACCCCTTGTGAATAGGTAT  250

seq1  TTATTTGCCATCTCTATTGCAGATCACCCTTTAGAAAGGTGACGCCCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGCCATCTCTATTGCAGATCACCCTTTAGAAAGGTGACGCCCACT  300

seq1  ACCGACAGAGCGGAGCCCTCTGATTTGCTGCTCCCCACCCGCCCCTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGACAGAGCGGAGCCCTCTGATTTGCTGCTCCCCACCCGCCCCTCTCT  350

seq1  ACTTCCTTTCCATTCACTATCCAACTTTCTCATCCCCAACTTCCAATGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTTTCCATTCACTATCCAACTTTCTCATCCCCAACTTCCAATGTA  400

seq1  GAAAACAGCATAAGTGTTAATACCTGGATAGGCTCCAGCACATCTCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAGCATAAGTGTTAATACCTGGATAGGCTCCAGCACATCTCTTTG  450

seq1  GAAAGTTACAGACACAATAACAAACTATGAATACGATTCCTCCAGTAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTACAGACACAATAACAAACTATGAATACGATTCCTCCAGTAGGC  500

seq1  TGATCCCAGAGGTCATTCTTTCTTCTCTTTTAAATAATTTTTAATAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCAGAGGTCATTCTTTCTTCTCTTTTAAATAATTTTTAATAATTT  550

seq1  TAGAATTATTTTCGATTGCTTTTAGATTTATTTATTTTACTTTACTTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTATTTTCGATTGCTTTTAGATTTATTTATTTTACTTTACTTCAT  600

seq1  GCGAGTGTTTTGCCCGCGTGTATGTCCATGCACCACACGTGTCTGCTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGTGTTTTGCCCGCGTGTATGTCCATGCACCACACGTGTCTGCTGCT  650

seq1  CAAGGGGGTCAGAAGCAGGTGTTAGATGGCCTGAAACTGAAGTTACAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGGGTCAGAAGCAGGTGTTAGATGGCCTGAAACTGAAGTTACAGAT  700

seq1  GGTTGTGAGCCACCATGTGGGTGCTGGGAATCGAACCTGGGTCCTCTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGAGCCACCATGTGGGTGCTGGGAATCGAACCTGGGTCCTCTGCA  750

seq1  ATGGCAGCAAGTGATCTTAACCACAGAAGCCATTTCTCCAGTCCCACCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGCAAGTGATCTTAACCACAGAAGCCATTTCTCCAGTCCCACCCA  800

seq1  CTCCTAGTACATTCTATTCCTATGTAAACATCAATACGGAATAGAGTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAGTACATTCTATTCCTATGTAAACATCAATACGGAATAGAGTGGT  850

seq1  ACAACTCGAATAACACTGTGCCACAGTGAAGAAAGTATAGAT-GGCTTTT  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACAACTCGAATAACACTGTGCCACAGTGAAGAAAGTATAGATGGGCTTTT  900

seq1  AAAACTTACATGACGTAAACTGGGCC-GGGTGGCACACACTTTAATCCCA  948
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAAACTTACATGACGTAAACTGGGCCGGGGTGGCACACACTTTAATCCCA  950

seq1  GCAC-TTGGGAGACAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGC-CC  996
      |||| ||||||||||||||||||||||||||||||||||||| |||| | 
seq2  GCACTTTGGGAGACAGAGGCAGGCAGATTTCTGAGTTCGAGGTCAGCTCG  1000

seq1  GGTCTACAAAGT-GAGTTTCAGGACAGCCAGGACTATTAAAAAACAAAA  1044
      |||||||||||| ||||||||||||||||||||||||| ||||||||||
seq2  GGTCTACAAAGTGGAGTTTCAGGACAGCCAGGACTATT-AAAAACAAAA  1048