BAC Information

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BAC

Clone NameB6Ng01-346F02
Chromosome2 (Build37)
Map Location 152,581,216 - 152,686,937
singlet/doubletdoublet
Overlap geneCox4i2, Bcl2l1, Tpx2
Upstream geneRspo4, Angpt4, 5430432M24Rik, 2310046K01Rik, Scrt2, Srxn1, Tcf15, LOC100043843, Csnk2a1, Tbc1d20, Rbck1, Trib3, LOC628060, Nrsn2, Sox12, Zcchc3, 6820408C15Rik, EG629114, LOC668930, 9230107O10Rik, 9230002F21Rik, EG654457, OTTMUSG00000015852, Defb29, 4930525K10Rik, Defb19, OTTMUSG00000015859, Defb36, OTTMUSG00000015862, Rem1, H13, Mcts2, Id1, LOC629170
Downstream geneMylk2, Fkhl18, Dusp15, Ttll9, Pdrg1, Xkr7, BC020535, Hck, Tm9sf4, Tspyl3, Plagl2, Pofut1, Kif3b, 2500004C02Rik, Asxl1, 8430427H17Rik, Commd7, 7530422B04Rik, Dnmt3b, LOC668932, Mapre1, EG329541, LOC100043869, Spag4l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346F02.bB6Ng01-346F02.g
ACCGA128250GA128251
length8981,057
definitionB6Ng01-346F02.b B6Ng01-346F02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(152,686,062 - 152,686,937)(152,581,216 - 152,582,270)
sequence
gaattcaaagaaacaaaaaaggggaaaaagcaacatattcatttatccat
atacatggatgaagaagtagtgagtgttagtagctgagtttgtgaaggac
ttgggagtcctgcagtaggagagaccacactctaaagctttggtgttctt
tattattatataaaataaatgtttaccttttcattgaaaaggctagctag
ctaagcatttattttcctctaagtttgcactcagaaaagattggaactcc
tgcagtttttgttaaatatttttgataatctgacaataatttcaaatcaa
ttgctttttggaaattctactttgcatttttgtggttcataaattgacca
ctatcttgacttatccaaacataacatactctttctggtatttatgtata
ttttaaatatttatttatgcattttatgtatatgagtgctctgtcttcat
gcatgccagaagagggcatcatgatgatcccattatagatagttgattgc
tgggaattaactcaagacctctgaaagggcagccaatgcttataactgct
aaggcgagtccccagtcttttttttgaacttgcacaagtgttttttgctt
gcatgtctgtatgtgcacccgatgtgtgcctggtgcctgcagaggtaaga
agagggcatcaatggcctgggactagagttatgggtgattatgaagtacc
atgtgcgtgttgagatttaaacctggatcctctgtgaaaacagcaaccac
tgtaaccactgagatatctcttcaggacaatgacctattttttaaaatgc
ttcctttaatttttttttggtttttcgagacagggtttctctgtataagc
cctggctgtccgggaactcactttgtagaccaggctgggcctggaact
gaattctcctttccagaccttggtgtcaggactggtcagaagaaagaggt
ctaaagcaggagagatttcagccagatagcaggaggaatgtcctgaggct
caggagaataatgtcaaagattccatttgttgatccattacaaccccggt
acatggaagactgaagcaggaggattactgtgagttagagaccagcctgg
actacaaagggagactgtctcaaaaaaaaaaaaaataggagagagagaga
gagagagagagagagagagagagagaggagacgcagaactaagactgctc
tgatagagttctcctgcttctagtgtcaacaaacaggggagtctcaagca
agaccctccacttcctaaccctgctcagggaaacccagtggtctgcaaga
agctgaggcccagttaccaaggaaagactctagaagaggctgggaagaaa
actgtcctctctggagggatgatcaccaaatactgcaatgtgccaagcct
ttggtgcttaaaaaattattattgcttctgtgcaccaccatgtatggggg
tcattaaaatgtatcattgtatgcatgcaggatatatggggtcctgctac
accatgcttggagaggaggtcagaggacaaccttgtggaatctcttcttc
cacgtttgcatagactctagggattgaactcaggtgtcaagccactgcag
ctgtctttaccctgcgtcacttaaaggtcccttccttttttttttttgtt
ctatttcatttgggggatgggtggcaaggagaaacgctatcatgtaccag
gctgatctagaaatttgctatgtagctaaggacaaccttgaacttctaat
cctcctgcctctgcctctcaagtcctcccaagtgatgagatgacagtcat
ggtctaccatgctcaggggtactggagatcaacccagaccttctcactcc
ccccaggcttcctgttacactaggcaaacactctactgaccggagctata
ctcttggcccttcttccccagaggacttttggatgaataatctgggagcc
tccactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_152686062_152686937
seq2: B6Ng01-346F02.b_48_924 (reverse)

seq1  TACAAAGTGAGTTCCCGGACAGCCAGGGC-TATACAGAGAAACCCTGTCT  49
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TACAAAGTGAGTTCCCGGACAGCCAGGGCTTATACAGAGAAACCCTGTCT  50

seq1  CGAAAAACCAAAAAAAAATTAAAGGAAGCATTTTAAAAAATAGGTCATTG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAAACCAAAAAAAAATTAAAGGAAGCATTTTAAAAAATAGGTCATTG  100

seq1  TCCTGAAGAGATATCTCAGTGGTTACAGTGGTTGCTGTTTTCACAGAGGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAGAGATATCTCAGTGGTTACAGTGGTTGCTGTTTTCACAGAGGA  150

seq1  TCCAGGTTTAAATCTCAACACGCACATGGTACTTCATAATCACCCATAAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTTTAAATCTCAACACGCACATGGTACTTCATAATCACCCATAAC  200

seq1  TCTAGTCCCAGGCCATTGATGCCCTCTTCTTACCTCTGCAGGCACCAGGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTCCCAGGCCATTGATGCCCTCTTCTTACCTCTGCAGGCACCAGGC  250

seq1  ACACATCGGGTGCACATACAGACATGCAAGCAAAAAACACTTGTGCAAGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCGGGTGCACATACAGACATGCAAGCAAAAAACACTTGTGCAAGT  300

seq1  TCAAAAAAAAGACTGGGGACTCGCCTTAGCAGTTATAAGCATTGGCTGCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAAAAGACTGGGGACTCGCCTTAGCAGTTATAAGCATTGGCTGCC  350

seq1  CTTTCAGAGGTCTTGAGTTAATTCCCAGCAATCAACTATCTATAATGGGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGAGGTCTTGAGTTAATTCCCAGCAATCAACTATCTATAATGGGA  400

seq1  TCATCATGATGCCCTCTTCTGGCATGCATGAAGACAGAGCACTCATATAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATGATGCCCTCTTCTGGCATGCATGAAGACAGAGCACTCATATAC  450

seq1  ATAAAATGCATAAATAAATATTTAAAATATACATAAATACCAGAAAGAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGCATAAATAAATATTTAAAATATACATAAATACCAGAAAGAGT  500

seq1  ATGTTATGTTTGGATAAGTCAAGATAGTGGTCAATTTATGAACCACAAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATGTTTGGATAAGTCAAGATAGTGGTCAATTTATGAACCACAAAA  550

seq1  ATGCAAAGTAGAATTTCCAAAAAGCAATTGATTTGAAATTATTGTCAGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAGTAGAATTTCCAAAAAGCAATTGATTTGAAATTATTGTCAGAT  600

seq1  TATCAAAAATATTTAACAAAAACTGCAGGAGTTCCAATCTTTTCTGAGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAAATATTTAACAAAAACTGCAGGAGTTCCAATCTTTTCTGAGTG  650

seq1  CAAACTTAGAGGAAAATAAATGCTTAGCTAGCTAGCCTTTTCAATGAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTAGAGGAAAATAAATGCTTAGCTAGCTAGCCTTTTCAATGAAAA  700

seq1  GGTAAACATTTATTTTATATAATAATAAAGAACACCAAAGCTTTAGAGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAACATTTATTTTATATAATAATAAAGAACACCAAAGCTTTAGAGTG  750

seq1  TGGTCTCTCCTACTGCAGGACTCCCAAGTCCTTCACAAACTCAGCTACTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCTCCTACTGCAGGACTCCCAAGTCCTTCACAAACTCAGCTACTA  800

seq1  ACACTCACTACTTCTTCATCCATGTATATGGATAAATGAATATGTTGCTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCACTACTTCTTCATCCATGTATATGGATAAATGAATATGTTGCTT  850

seq1  TTTCCCCTTTTTTGTTTCTTTGAATTC  876
      |||||||||||||||||||||||||||
seq2  TTTCCCCTTTTTTGTTTCTTTGAATTC  877

seq1: chr2_152581216_152582270
seq2: B6Ng01-346F02.g_69_1125

seq1  GAATTCTCCTTTCCAGACCTTGGTGTCAGGACTGGTCAGAAGAAAGAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTTCCAGACCTTGGTGTCAGGACTGGTCAGAAGAAAGAGGT  50

seq1  CTAAAGCAGGAGAGATTTCAGCCAGATAGCAGGAGGAATGTCCTGAGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCAGGAGAGATTTCAGCCAGATAGCAGGAGGAATGTCCTGAGGCT  100

seq1  CAGGAGAATAATGTCAAAGATTCCATTTGTTGATCCATTACAACCCCGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAATAATGTCAAAGATTCCATTTGTTGATCCATTACAACCCCGGT  150

seq1  ACATGGAAGACTGAAGCAGGAGGATTACTGTGAGTTAGAGACCAGCCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAAGACTGAAGCAGGAGGATTACTGTGAGTTAGAGACCAGCCTGG  200

seq1  ACTACAAAGGGAGACTGTCTCAAAAAAAAAAAAAATAGGAGAGAGAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAAAGGGAGACTGTCTCAAAAAAAAAAAAAATAGGAGAGAGAGAGA  250

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGGAGACGCAGAACTAAGACTGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGGAGACGCAGAACTAAGACTGCTC  300

seq1  TGATAGAGTTCTCCTGCTTCTAGTGTCAACAAACAGGGGAGTCTCAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGAGTTCTCCTGCTTCTAGTGTCAACAAACAGGGGAGTCTCAAGCA  350

seq1  AGACCCTCCACTTCCTAACCCTGCTCAGGGAAACCCAGTGGTCTGCAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTCCACTTCCTAACCCTGCTCAGGGAAACCCAGTGGTCTGCAAGA  400

seq1  AGCTGAGGCCCAGTTACCAAGGAAAGACTCTAGAAGAGGCTGGGAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGGCCCAGTTACCAAGGAAAGACTCTAGAAGAGGCTGGGAAGAAA  450

seq1  ACTGTCCTCTCTGGAGGGATGATCACCAAATACTGCAATGTGCCAAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCTCTCTGGAGGGATGATCACCAAATACTGCAATGTGCCAAGCCT  500

seq1  TTGGTGCTTAAAAAATTATTATTGCTTCTGTGCACCACCATGTATGGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGCTTAAAAAATTATTATTGCTTCTGTGCACCACCATGTATGGGGG  550

seq1  TCATTAAAATGTATCATTGTATGCATGCAGGATATATGGGGTCCTGCTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAAATGTATCATTGTATGCATGCAGGATATATGGGGTCCTGCTAC  600

seq1  ACCATGCTTGGAGAGGAGGTCAGAGGACAACCTTGTGGAATCTCTTCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGCTTGGAGAGGAGGTCAGAGGACAACCTTGTGGAATCTCTTCTTC  650

seq1  CACGTTTGCATAGACTCTAGGGATTGAACTCAGGTGTCAAGCCACTGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTTTGCATAGACTCTAGGGATTGAACTCAGGTGTCAAGCCACTGCAG  700

seq1  CTGTCTTTACCCTGCGTCACTTAAAGGTCCCTTCCTTTTTTTTTTTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTTACCCTGCGTCACTTAAAGGTCCCTTCCTTTTTTTTTTTTGTT  750

seq1  CTATTTCATTTGGGGGATGGGTGGCAAGGAGAAACGCTATCATGTACCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCATTTGGGGGATGGGTGGCAAGGAGAAACGCTATCATGTACCAG  800

seq1  GCTGATCTAGAAA-TTGCTATGTAGCTAAGGACAACCTTGAACTTCTAAT  849
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GCTGATCTAGAAATTTGCTATGTAGCTAAGGACAACCTTGAACTTCTAAT  850

seq1  CCTCCTGCCTCTGCCTCTCAAGTCCTCCCAAGTGATGAGATGACAGTCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGCCTCTGCCTCTCAAGTCCTCCCAAGTGATGAGATGACAGTCAT  900

seq1  GGTCTACCATGCTCAGGGGTACTGGAGATCAAACCCAGACCTTCTCACT-  948
      |||||||||||||||||||||||||||||| |||||||||||||||||| 
seq2  GGTCTACCATGCTCAGGGGTACTGGAGATC-AACCCAGACCTTCTCACTC  949

seq1  CCCCCAGGCTTCCTG-TACACTAGGCAAACACTCTACTGACC-GAGCTAT  996
      ||||||||||||||| |||||||||||||||||||||||||| |||||||
seq2  CCCCCAGGCTTCCTGTTACACTAGGCAAACACTCTACTGACCGGAGCTAT  999

seq1  ACTCTTGGCCCTTCTTCCCCCAGAGGAACTTTGGATGGATTATCTGGGAG  1046
      |||||||||||||||| ||||||||||  |||||||| || |||||||||
seq2  ACTCTTGGCCCTTCTT-CCCCAGAGGACTTTTGGATGAATAATCTGGGAG  1048

seq1  CCTCCACTG  1055
      |||||||||
seq2  CCTCCACTG  1057