BAC Information

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BAC

Clone NameB6Ng01-346L16
Chromosome2 (Build37)
Map Location 16,534,890 - 16,536,028
singlet/doubletsinglet
Overlap genePlxdc2
Upstream geneLOC625457
Downstream gene4930515L03Rik, LOC383665, Nebl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346L16.bB6Ng01-346L16.g
ACCGA128546GA128547
length1,136621
definitionB6Ng01-346L16.b B6Ng01-346L16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctccatgggcattcttccgtggctcccactgaatatgtgagag
gaggattaaatcaaggaacaagcagaattgggccatgaaagctaatctct
ctacacaaacacacagacacagacagatacacacacacacacacacacac
acacacacacacacacacacacacacacagaattgtggggaaaattacaa
aatttcaattttatcagattatcatcattcaggagatgcccagatgccca
tatttgaagagaaaattatgaagatgtttattccgtcttgaaaatgagaa
ccgttgaattaccaaataagacaacaggaaggaaggacaaagatctcctt
tatctgatcacattcaacttcatttcccaactttttcccacattccctgg
cctctgacagtgtagttttaagtaatgacagatttttaaaatgctcacag
gcttcttgcctgacataaactgaatcttttgtaacctaaacattcctatt
cacttttacagcttcagtttacacagacacacacactattattattatta
ttattattattattattatttctagaaataagataattctttcttgacta
cataacctcctagagatctcctagggcacgggtgccaggaaagctgaggg
aatagagaccctattcctggggataaacaaagagctctacaccctctccc
cagaaagagtcaattcccaagaaacatactaagcttttctagtacatctc
agacaatgcctagttgccaataactccagaagactcatactctacattga
aaccttctctctgtcttcttaagtcaagaagatctgattacacacttctg
gtgttttgaccctatctagctcattccgacctgccttactatgccagatt
tagatttctgcttctcacatctatcccctggtatattactttctcttatc
aatgcttaatacgccagatgaagaagctataaatgttctctgggctgtgg
agatggcttagcaattagagtgattgctgtcttttcagaagacctgtgtc
agctctagtacccaaggcagctgactcacaactccttataattttagcac
ccaagggatctaatgcccattctgggtctcagttac

gaattctttgtttagttatgtacctcatttttaatagggctatttgattt
cccgcagtctagcttcttgacttctttgtatatgttagatattagccccc
tatcagatttaggattagtaaagatcttttgttaatctgttgattgccct
ttttgtcttattgaaagtgactgccctacctgaggatccatcccataaac
aaccaccaaaaccagacactactgcacatgccaacaaaagctagctgaca
ggagcctgatatatctgtctcctgagaggctttgctagtgcctgacaaat
acagaagtggatgctcacagtcatccattgatgaagcacagggtccccaa
tgaaggagctagagaaaggacccaaggagctgaaggggtttgcaacccca
taagaggaacaacaatatgaactaaccagtaccccccagagttcccttgg
attaaaccaccaatcaaagaaaacacacagtgggactcatggctctagct
gcatatgtagcagagaatggtctagttaggcatcaatgagaagagaggcc
cttggtcctttgaaggatctatgccccagtataggggaatgccagggtca
ggaagtgggagtgggtgggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_16534890_16536028
seq2: B6Ng01-346L16.b_44_1179 (reverse)

seq1  GTGACTGAGA-CCAGAATGGGGCATTAGATCCCTT-GGTGCTAAAATTAT  48
      || ||||||| ||||||| |||||||||||||||| ||||||||||||||
seq2  GTAACTGAGACCCAGAAT-GGGCATTAGATCCCTTGGGTGCTAAAATTAT  49

seq1  AAGGAGTTGTGAGTCAGCTGCCCTGGGTACTAAGAGCTGGACACAGGTCT  98
      |||||||||||||||||||||| |||||||| |||||| |||||||||||
seq2  AAGGAGTTGTGAGTCAGCTGCCTTGGGTACT-AGAGCT-GACACAGGTCT  97

seq1  TCTGAAAAGACAGCAATCACTCCTAATTGCTAAGCCATCTCCACAGCCCA  148
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCTGAAAAGACAGCAATCACT-CTAATTGCTAAGCCATCTCCACAGCCCA  146

seq1  GAGAACATTTTATAGCTTCTTCATCTGGCGTATTAAGCATTGATAAGAGA  198
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACA-TTTATAGCTTCTTCATCTGGCGTATTAAGCATTGATAAGAGA  195

seq1  AAGTAATATACCAGGGGATAGATGTGAGAAGCAGAAATCTAAATCTGGCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATATACCAGGGGATAGATGTGAGAAGCAGAAATCTAAATCTGGCA  245

seq1  TAGTAAGGCAGGTCGGAATGAGCTAGATAGGGTCAAAACACCAGAAGTGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGGCAGGTCGGAATGAGCTAGATAGGGTCAAAACACCAGAAGTGT  295

seq1  GTAATCAGATCTTCTTGACTTAAGAAGACAGAGAGAAGGTTTCAATGTAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCAGATCTTCTTGACTTAAGAAGACAGAGAGAAGGTTTCAATGTAG  345

seq1  AGTATGAGTCTTCTGGAGTTATTGGCAACTAGGCATTGTCTGAGATGTAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGAGTCTTCTGGAGTTATTGGCAACTAGGCATTGTCTGAGATGTAC  395

seq1  TAGAAAAGCTTAGTATGTTTCTTGGGAATTGACTCTTTCTGGGGAGAGGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGCTTAGTATGTTTCTTGGGAATTGACTCTTTCTGGGGAGAGGG  445

seq1  TGTAGAGCTCTTTGTTTATCCCCAGGAATAGGGTCTCTATTCCCTCAGCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGCTCTTTGTTTATCCCCAGGAATAGGGTCTCTATTCCCTCAGCT  495

seq1  TTCCTGGCACCCGTGCCCTAGGAGATCTCTAGGAGGTTATGTAGTCAAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGCACCCGTGCCCTAGGAGATCTCTAGGAGGTTATGTAGTCAAGA  545

seq1  AAGAATTATCTTATTTCTAGAAATAATAATAATAATAATAATAATAATAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTATCTTATTTCTAGAAATAATAATAATAATAATAATAATAATAA  595

seq1  TAATAGTGTGTGTGTCTGTGTAAACTGAAGCTGTAAAAGTGAATAGGAAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTGTGTGTGTCTGTGTAAACTGAAGCTGTAAAAGTGAATAGGAAT  645

seq1  GTTTAGGTTACAAAAGATTCAGTTTATGTCAGGCAAGAAGCCTGTGAGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGGTTACAAAAGATTCAGTTTATGTCAGGCAAGAAGCCTGTGAGCA  695

seq1  TTTTAAAAATCTGTCATTACTTAAAACTACACTGTCAGAGGCCAGGGAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAATCTGTCATTACTTAAAACTACACTGTCAGAGGCCAGGGAAT  745

seq1  GTGGGAAAAAGTTGGGAAATGAAGTTGAATGTGATCAGATAAAGGAGATC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAAAAGTTGGGAAATGAAGTTGAATGTGATCAGATAAAGGAGATC  795

seq1  TTTGTCCTTCCTTCCTGTTGTCTTATTTGGTAATTCAACGGTTCTCATTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCTTCCTTCCTGTTGTCTTATTTGGTAATTCAACGGTTCTCATTT  845

seq1  TCAAGACGGAATAAACATCTTCATAATTTTCTCTTCAAATATGGGCATCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACGGAATAAACATCTTCATAATTTTCTCTTCAAATATGGGCATCT  895

seq1  GGGCATCTCCTGAATGATGATAATCTGATAAAATTGAAATTTTGTAATTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATCTCCTGAATGATGATAATCTGATAAAATTGAAATTTTGTAATTT  945

seq1  TCCCCACAATTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACAATTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  995

seq1  TGTGTGTGTGTGTATCTGTCTGTGTCTGTGTGTTTGTGTAGAGAGATTAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTATCTGTCTGTGTCTGTGTGTTTGTGTAGAGAGATTAG  1045

seq1  CTTTCATGGCCCAATTCTGCTTGTTCCTTGATTTAATCCTCCTCTCACAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATGGCCCAATTCTGCTTGTTCCTTGATTTAATCCTCCTCTCACAT  1095

seq1  ATTCAGTGGGAGCCACGGAAGAATGCCCATGGAGAGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTGGGAGCCACGGAAGAATGCCCATGGAGAGAATTC  1136


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