BAC Information

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BAC

Clone NameB6Ng01-346O09
Chromosome2 (Build37)
Map Location 86,691,171 - 86,692,374
singlet/doubletsinglet
Overlap geneOlfr1095
Upstream geneOlfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094
Downstream geneOlfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346O09.bB6Ng01-346O09.g
ACCGA128666GA128667
length1,1891,228
definitionB6Ng01-346O09.b B6Ng01-346O09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcttcaggattgacaacaggataaaagcataggaaaacagaat
gatcaggatggtgactagctcaatgaaactcacaaagaagaagagcaaga
gctcatttacataagtttcagagcaggaaatagcaagtagaggtggtata
tcacagaatatatgtttgacttcattggactgacagaaagacaggctgaa
agtggccactgtgtggataatagcatgcaaaattccaccagcataggaag
caatgatgagtggtaaatagactcgaggagacatgctcactgcatacagt
agtgggtcgtgaatggctacatatcggtcataagccattgctgccaaaag
aaaacattctgtggttccaaatgtaacagcaagaaacatctgtgttgcac
aaccatgaaatgaaatgattttgcttttagacataaagcctactaacata
tttggagtgatatctgaagaatagcaagcatctacaaaagacaatgcact
gaggaaacagtacatagggttgtggagttggggatcaccaacaactaaaa
taataagtcctacatttcctattagagtaaaaaggtaaattgctaggaag
aggaaaaagagaatgatctgaagttcattgttgtctgtgagtcccttgag
aacaaagaaagtagcttctgtgatgtttttcatattggaatctcatgcaa
caatgttgacgatactcaggccatagtactatgataacaacaaatagctc
gtaaatcaatgaacatagactaattgaaatacaccaatcagtactctaga
aagaatagctgtatggtagcttaatcatatgtaccacttaaatacaatga
aatagagatactgctgttaataatagagatagtttaataatgttctattt
gttcaatgcaataaatatcaaaattcttcacagaccataataaaatagta
ccgaattaaatggaaaatgaagggatcttcctgaacaacctggtctcata
catgatccaaatctaggatagacagtatctactgctacaaaagtcatatg
taaattgtggatgaagacatagcattagcaggcataaatataccattgaa
acttttgatgaagacttaaaaaacttagcacaatcttcttcaatggacaa
ggatggcaaatggtggatggtgggttaagaaataattca
gaattctttcatttcttttaagggttatgagatggtttatctagtttatc
tggtactgatctagtttttgtacctggtatctgtctagcaaattctccat
ttcatttagattttcctgttaggttgagtatatgcttttgcggtaggatc
tgatgattttttaatttcctcagtatctgttgttctgattttgttaattt
ggatacctgtctccatgcccttgagttggattggctaagggtttatctat
cttgtagattttctcaaagaatcagatcttagttttgttgattctttgta
tagttctctttgtttctaattggttgatttctgataggattatttactgt
tgtctattgttattgggtgtgtttgtttctttttcttctagagcttttag
atatgttcttaagtttctagttttggatctctccaatatctttatgaggt
tactcagtgattttaattttcctcttagcatggttttcattgtgtaccat
aattttgcttatggtattcctaattatttgttaaattctagaaagtcttt
aatttattttttctttcagtgtgacatttccattattgtaatataaaata
acgaaaatctccaaagaactggaaaaatgtataaatgttcccactgttcc
ctctgtggtatatcagaaatgtttttaaaatgtgaaaacattgcaaaaat
ttaaaagcaagaactggtttaaaatattaaactattgtcacaatttgaaa
gctgcaaacacagtatgtaactgataacccagaattgcaaatctgtagat
ttatcctatttatttttttaatttgcatttttattggatatttcattcac
tcatatctcaaaagcatcctctttttctgatttgcccccaagaacccttc
tatcccatccctctacccctgcctctttgacaatgtgcccctacccactc
acccaactactttcttgcctacctgcccttacattctctcacactgcagc
atcaagcttttcacaggacccagggccttcttcttcccacttatgcccag
gccatcctattgctacacatacagctagagccatggtccttccatgtgta
atcatggtttggtgttagaacctgggagctttgattgttgacattggcta
ttctcccatgggctgcaaccctctacgctcctcgagtctttcttactact
acttattgggagagacaccccatggtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86691171_86692374
seq2: B6Ng01-346O09.b_48_1236

seq1  GAATTCATCTTCAGGATTGACAACAGGATAAAAGCATAGGAAAACAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTTCAGGATTGACAACAGGATAAAAGCATAGGAAAACAGAAT  50

seq1  GATCAGGATGGTGACTAGCTCAATGAAACTCACAAAGAAGAAGAGCAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGGATGGTGACTAGCTCAATGAAACTCACAAAGAAGAAGAGCAAGA  100

seq1  GCTCATTTACATAAGTTTCAGAGCAGGAAATAGCAAGTAGAGGTGGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTTACATAAGTTTCAGAGCAGGAAATAGCAAGTAGAGGTGGTATA  150

seq1  TCACAGAATATATGTTTGACTTCATTGGACTGACAGAAAGACAGGCTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAATATATGTTTGACTTCATTGGACTGACAGAAAGACAGGCTGAA  200

seq1  AGTGGCCACTGTGTGGATAATAGCATGCAAAATTCCACCAGCATAGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCCACTGTGTGGATAATAGCATGCAAAATTCCACCAGCATAGGAAG  250

seq1  CAATGATGAGTGGTAAATAGACTCGAGGAGACATGCTCACTGCATACAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATGAGTGGTAAATAGACTCGAGGAGACATGCTCACTGCATACAGT  300

seq1  AGTGGGTCGTGAATGGCTACATATCGGTCATAAGCCATTGCTGCCAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTCGTGAATGGCTACATATCGGTCATAAGCCATTGCTGCCAAAAG  350

seq1  AAAACATTCTGTGGTTCCAAATGTAACAGCAAGAAACATCTGTGTTGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTCTGTGGTTCCAAATGTAACAGCAAGAAACATCTGTGTTGCAC  400

seq1  AACCATGAAATGAAATGATTTTGCTTTTAGACATAAAGCCTACTAACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGAAATGAAATGATTTTGCTTTTAGACATAAAGCCTACTAACATA  450

seq1  TTTGGAGTGATATCTGAAGAATAGCAAGCATCTACAAAAGACAATGCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGTGATATCTGAAGAATAGCAAGCATCTACAAAAGACAATGCACT  500

seq1  GAGGAAACAGTACATAGGGTTGTGGAGTTGGGGATCACCAACAACTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAACAGTACATAGGGTTGTGGAGTTGGGGATCACCAACAACTAAAA  550

seq1  TAATAAGTCCTACATTTCCTATTAGAGTAAAAAGGTAAATTGCTAGGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGTCCTACATTTCCTATTAGAGTAAAAAGGTAAATTGCTAGGAAG  600

seq1  AGGAAAAAGAGAATGATCTGAAGTTCATTGTTGTCTGTGAGTCCCTTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAGAGAATGATCTGAAGTTCATTGTTGTCTGTGAGTCCCTTGAG  650

seq1  AACAAAGAAAGTAGCTTCTGTGATGTTTTTCATATTGGAATCTCATGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGAAAGTAGCTTCTGTGATGTTTTTCATATTGGAATCTCATGCAA  700

seq1  CAATGTTGACGATACTCAGGCCATAGTACTATGATAACAACAAATAGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTGACGATACTCAGGCCATAGTACTATGATAACAACAAATAGCTC  750

seq1  GTAAATCAATGAACATAGACTAATTGAAATACACCAATCAGTACTCTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATCAATGAACATAGACTAATTGAAATACACCAATCAGTACTCTAGA  800

seq1  AAGAATAGCTGTATGGTAGCTTAATCATATGTACCACTTAAATACAATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAGCTGTATGGTAGCTTAATCATATGTACCACTTAAATACAATGA  850

seq1  AATAGAGATACTGCTGTTAATAATAGAGATAGTTTAATAATGTTCTATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGATACTGCTGTTAATAATAGAGATAGTTTAATAATGTTCTATTT  900

seq1  GTTCAATGCAATAAATATCAAAATTCTTCACAGACCATAATAAAATAGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATGCAATAAATATCAAAATTCTTCACAGACCATAATAAAATAGTA  950

seq1  CCGAATTAAATGGAAAATGAAGGGATCTTCCTGAACAACCTGGTCTCAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCGAATTAAATGGAAAATGAAGGGATCTTCCTGAACAACCTGGTCTC-AT  999

seq1  ACATGATCCAAAATCTTAGGATAAGACAGTATCTACTGCTACAAAAGTCA  1050
      ||||||||| ||||| |||||| |||||||||||||||||||||||||||
seq2  ACATGATCC-AAATC-TAGGAT-AGACAGTATCTACTGCTACAAAAGTCA  1046

seq1  TATGTAAATTGTGGAATGAAAAGAAACATAGAAATAAACAGGCATAAATA  1100
      |||||||||||||| ||||    | ||||||  || | ||||||||||||
seq2  TATGTAAATTGTGG-ATGA----AGACATAG-CATTAGCAGGCATAAATA  1090

seq1  TACCATTGAAACTTTTGATGAAGACTTAAAAAAACATTAGCAACAATCTT  1150
      |||||||||||||||||||||||||||||||||   ||||| ||||||||
seq2  TACCATTGAAACTTTTGATGAAGACTTAAAAAA--CTTAGC-ACAATCTT  1137

seq1  CTTCAATGGACAAAGATAGAAAAATGGT-GATGGTGGGTAAAAGAATTAA  1199
      ||||||||||||| ||| |  ||||||| |||||||||| ||  |||  |
seq2  CTTCAATGGACAAGGAT-GGCAAATGGTGGATGGTGGGTTAAGAAAT--A  1184

seq1  ATTCA  1204
      |||||
seq2  ATTCA  1189