BAC Information

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BAC

Clone NameB6Ng01-346O10
Chromosome2 (Build37)
Map Location 86,691,171 - 86,692,353
singlet/doubletsinglet
Overlap geneOlfr1095
Upstream geneOlfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094
Downstream geneOlfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346O10.bB6Ng01-346O10.g
ACCGA128668GA128669
length1,1761,233
definitionB6Ng01-346O10.b B6Ng01-346O10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcttcaggattgacaacaggataaaagcataggaaaacagaat
gatcaggatggtgactagctcaatgaaactcacaaagaagaagagcaaga
gctcatttacataagtttcagagcaggaaatagcaagtagaggtggtata
tcacagaatatatgtttgacttcattggactgacagaaagacaggctgaa
agtggccactgtgtggataatagcatgcaaaattccaccagcataggaag
caatgatgagtggtaaatagactcgaggagacatgctcactgcatacagt
agtgggtcgtgaatggctacatatcggtcataagccattgctgccaaaag
aaaacattctgtggttccaaatgtaacagcaagaaacatctgtgttgcac
aaccatgaaatgaaatgattttgcttttagacataaagcctactaacata
tttggagtgatatctgaagaatagcaagcatctacaaaagacaatgcact
gaggaaacagtacatagggttgtggagttggggatcaccaacaactaaaa
taataagtcctacatttcctattagagtaaaaaggtaaattgctaggaag
aggaaaaagagaatgatctgaagttcattgttgtctgtgagtcccttgag
aacaaagaaagtagcttctgtgatgtttttcatattggaatctcatgcaa
caatgttgacgatactcaggccatagtactatgataacaacaaatagctc
gtaaatcaatgaacatagactaattgaaatacaccaatcagtactctaga
aagaatagctgtatggtagcttaatcatatgtaccacttaaatacaatga
aatagagatactgctgttaataatagagatagtttaataatgttctattt
gttcaatgcaataaatatcaaaattcttcacagaccataataaaatagta
ccgaattaaatgggaaaatgaagggatctcctgaacaacctggtctcata
catgatccaaaatcttaggataagacagtatctactgctacaaaagtcat
atgtaaattgtggaatgaaaaagaaacatagaaataaacagcataaatat
accattggaaactttgatgagactgaaaaaaacatagcaacatcttctca
tggacaagaatagaaaaatgggatgg
gaattctttcatttccttaagggttatgagatggtttatctagtttatct
ggtactgatctagtttttgtacctggtatctgtctagcaaattctccatt
tcatttagattttcctgttaggttgagtatatgcttttgcggtaggatct
gatgattttttaatttcctcagtatctgttgttctgattttgttaatttg
gatacctgtctccatgcccttgagttggattggctaagggtttatctatc
ttgtagattttctcaaagaatcagatcttagttttgttgattctttgtat
agttctctttgtttctaattggttgatttctgataggattatttactgtt
gtctattgttattgggtgtgtttgtttctttttcttctagagcttttaga
tatgttcttaagtttctagttttggatctctccaatatctttatgaggtt
actcagtgattttaattttcctcttagcatggttttcattgtgtaccata
attttgcttatggtattcctaattatttgttaaattctagaaagtcttta
atttattttttctttcagtgtgacatttccattattgtaatataaaataa
cgaaaatctccaaagaactggaaaaatgtataaatgttcccactgttccc
tctgtggtatatcagaaatgtttttaaaatgtgaaaacattgcaaaaatt
taaaagcaagaactggtttaaaatattaaactattgtcacaatttgaaag
ctgcaaacacagtatgtaactgataacccagaattgcaaatctgtagatt
tatcctattttatttttttaatttgcattttttattggatatttcattca
ctcatatctcaaaagccatcctcttttctgattgcccccaagaaaccctc
tatcccatccctctacccctgcctctttgacaatgtgcccctacccactc
acccaactacttctgcctacctgcccttacaattctctcacactgcagca
tcagctttcacaggacaagggccttcttctcccacttattgcccaggcca
tcctatgctacacatacagctagagccatggttccctcatgtgtaatcca
tgttggtggtttagaccttgggagccttgattgtttgacattgcctatcc
ttccaatgggctgcaagcccttagctccctagtccttttcctaacctaat
cttatggagaaatctacatgagtaaccagacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86691171_86692353
seq2: B6Ng01-346O10.b_46_1221

seq1  GAATTCATCTTCAGGATTGACAACAGGATAAAAGCATAGGAAAACAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTTCAGGATTGACAACAGGATAAAAGCATAGGAAAACAGAAT  50

seq1  GATCAGGATGGTGACTAGCTCAATGAAACTCACAAAGAAGAAGAGCAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGGATGGTGACTAGCTCAATGAAACTCACAAAGAAGAAGAGCAAGA  100

seq1  GCTCATTTACATAAGTTTCAGAGCAGGAAATAGCAAGTAGAGGTGGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTTACATAAGTTTCAGAGCAGGAAATAGCAAGTAGAGGTGGTATA  150

seq1  TCACAGAATATATGTTTGACTTCATTGGACTGACAGAAAGACAGGCTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAATATATGTTTGACTTCATTGGACTGACAGAAAGACAGGCTGAA  200

seq1  AGTGGCCACTGTGTGGATAATAGCATGCAAAATTCCACCAGCATAGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCCACTGTGTGGATAATAGCATGCAAAATTCCACCAGCATAGGAAG  250

seq1  CAATGATGAGTGGTAAATAGACTCGAGGAGACATGCTCACTGCATACAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATGAGTGGTAAATAGACTCGAGGAGACATGCTCACTGCATACAGT  300

seq1  AGTGGGTCGTGAATGGCTACATATCGGTCATAAGCCATTGCTGCCAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTCGTGAATGGCTACATATCGGTCATAAGCCATTGCTGCCAAAAG  350

seq1  AAAACATTCTGTGGTTCCAAATGTAACAGCAAGAAACATCTGTGTTGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTCTGTGGTTCCAAATGTAACAGCAAGAAACATCTGTGTTGCAC  400

seq1  AACCATGAAATGAAATGATTTTGCTTTTAGACATAAAGCCTACTAACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGAAATGAAATGATTTTGCTTTTAGACATAAAGCCTACTAACATA  450

seq1  TTTGGAGTGATATCTGAAGAATAGCAAGCATCTACAAAAGACAATGCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGTGATATCTGAAGAATAGCAAGCATCTACAAAAGACAATGCACT  500

seq1  GAGGAAACAGTACATAGGGTTGTGGAGTTGGGGATCACCAACAACTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAACAGTACATAGGGTTGTGGAGTTGGGGATCACCAACAACTAAAA  550

seq1  TAATAAGTCCTACATTTCCTATTAGAGTAAAAAGGTAAATTGCTAGGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGTCCTACATTTCCTATTAGAGTAAAAAGGTAAATTGCTAGGAAG  600

seq1  AGGAAAAAGAGAATGATCTGAAGTTCATTGTTGTCTGTGAGTCCCTTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAGAGAATGATCTGAAGTTCATTGTTGTCTGTGAGTCCCTTGAG  650

seq1  AACAAAGAAAGTAGCTTCTGTGATGTTTTTCATATTGGAATCTCATGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGAAAGTAGCTTCTGTGATGTTTTTCATATTGGAATCTCATGCAA  700

seq1  CAATGTTGACGATACTCAGGCCATAGTACTATGATAACAACAAATAGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTGACGATACTCAGGCCATAGTACTATGATAACAACAAATAGCTC  750

seq1  GTAAATCAATGAACATAGACTAATTGAAATACACCAATCAGTACTCTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATCAATGAACATAGACTAATTGAAATACACCAATCAGTACTCTAGA  800

seq1  AAGAATAGCTGTATGGTAGCTTAATCATATGTACCACTTAAATACAATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAGCTGTATGGTAGCTTAATCATATGTACCACTTAAATACAATGA  850

seq1  AATAGAGATACTGCTGTTAATAATAGAGATAGTTTAATAATGTTCTATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGATACTGCTGTTAATAATAGAGATAGTTTAATAATGTTCTATTT  900

seq1  GTTCAATGCAATAAATATCAAAATTCTTCACAGACCATAATAAAATAGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATGCAATAAATATCAAAATTCTTCACAGACCATAATAAAATAGTA  950

seq1  CCGAATTAAAT-GGAAAATGAAGGGATCTTCCTGAACAACCTGGTCTCAA  999
      ||||||||||| |||||||||||||||| ||||||||||||||||||| |
seq2  CCGAATTAAATGGGAAAATGAAGGGATC-TCCTGAACAACCTGGTCTC-A  998

seq1  TACATGATCCAAAATCTTAGGATAAGACAGTATCTACTGCTACAAAAGTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGATCCAAAATCTTAGGATAAGACAGTATCTACTGCTACAAAAGTC  1048

seq1  ATATGTAAATTGTGGAATG-AAAAGAAACATAGAAATAAACAGGCATAAA  1098
      ||||||||||||||||||| |||||||||||||||||||||| |||||||
seq2  ATATGTAAATTGTGGAATGAAAAAGAAACATAGAAATAAACA-GCATAAA  1097

seq1  TATACCATTGAAACTTTTGATGAAGACTTAAAAAAACATTAGCAACAATC  1148
      |||||||||| ||  ||||||| ||||| ||||||||| ||||||| |||
seq2  TATACCATTGGAAACTTTGATG-AGACTGAAAAAAACA-TAGCAAC-ATC  1144

seq1  TTCTTCAATGGACAAAGATAGAAAAATGGTGATGG  1183
      ||||   ||||||||  |||||||||||| |||||
seq2  TTCT--CATGGACAAGAATAGAAAAATGG-GATGG  1176