BAC Information

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BAC

Clone NameB6Ng01-347A10
Chromosome2 (Build37)
Map Location 173,260,511 - 173,261,675
singlet/doubletsinglet
Overlap genenone
Upstream gene2410001C21Rik, A330041C17Rik, 1700029J11Rik, LOC629957, Tcfap2c, LOC100043750, Bmp7, LOC100043751, Spo11, Rae1, Rbm38, Ctcfl, EG619800, Pck1, Zbp1, Tmepai
Downstream gene1700021F07Rik, 1700030G11Rik, LOC100043911, Rab22a, 1700010B08Rik, Vapb, LOC620189, LOC664880, LOC100043912, LOC664901, Stx16, Npepl1, Nespas, Gnas, Th1l, Ctsz
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347A10.g
ACCGA128757
length1,165
definitionB6Ng01-347A10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccattcttgctgatatccatgtgacttcctcgtagttttagca
gggaaatctgagatcccacctgtgagggtgacacaaagtttcccccttta
aaaaaaacttatgtatgtttaaaaaaagaaaaaaaaaagttgagaagccc
agcctggaaaagctctgtgcatgattctaacagcacgatgctctggaaaa
ggcgaagtgagagagatcatggcgctgttagtgactgacctcaaggggca
ggggcagcttgtcttcccaggagacagccattggtaggggtgagggccta
accccagggcacagggcacaggggctgaagatataattgccattcatctc
ttgatttgagaatctgcccagtggtatagccactggcatggctggtccca
agggagtttggttgcagagaccgacctgccaggcttttgtgctaaagtca
gaggcccttgatgtattattcaggtactgatcaatggcagaggcagatcc
attctccaccggtcctcctggctgggggcctctggtgtgttagaagcaac
tgcagctgtctgaaacatctgctgagctgcagcctcagctccaggccatg
gctaccagagaaacattcgaacccatggcctgcttctcaggctgctctga
cctctgagtcctctgggagaagcggctgttcccagcctcagaggaaagga
agggtggtctcaggcttcacccatgttctgtctctgtgtccagaagtagc
tgtcatcaaagggggacgcacttgggagttagaaatagctgtcagggact
tgccagaccctcagggtgcagcagctgcctgaagtcgttgtttgctgccc
ctgggctgggtgactgtagctgaatcactgagccagatgagacctgtgcg
gctcacctcctacgaggtttgagtgcagagaccatgtggcaggaattttg
gccctctgtgctgggtcaggcttggtcaggctgggtcagctgtgggttgc
ttaggttggaagcaggacctcagagcagagctgcagcattctcagttctg
aacatggacttcctgagaggtcgtggagcgtccatccctctcaagagcac
aagcagaacactgggctttcttgttgggtgaggtgctgatacactgctag
gtgcttggacaagtt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_173260511_173261675
seq2: B6Ng01-347A10.g_67_1231 (reverse)

seq1  AACTAGTCCAAAGCA-CTAGCAGGTGGTATCAGCACCT-ACC--ACATGA  46
      |||| |||| ||||| |||||||   |||||||||||| |||  ||| ||
seq2  AACTTGTCC-AAGCACCTAGCAG--TGTATCAGCACCTCACCCAACAAGA  47

seq1  AAG-CCAGTG-TCTGCCTGTGCTCCTG-GAGGGATGGACCGCT-CACGAC  92
      ||| |||||| ||||| ||||||| || |||||||||| |||| ||||||
seq2  AAGCCCAGTGTTCTGCTTGTGCTCTTGAGAGGGATGGA-CGCTCCACGAC  96

seq1  CTCTCAGGAAGTTCAATGTCAGAAACTGAG-ATGCTGCAGCTCTGCTCTG  141
      |||||||||||| ||   |||| ||||||| |||||||||||||||||||
seq2  CTCTCAGGAAGTCCATGTTCAG-AACTGAGAATGCTGCAGCTCTGCTCTG  145

seq1  AGGTCCTGGCTTCCCACCCTAAGCAACCCCACAGCTGACCCAGCCTGACC  191
      ||||||| |||| ||| ||||||||| |||||||||||||||||||||||
seq2  AGGTCCT-GCTT-CCAACCTAAGCAA-CCCACAGCTGACCCAGCCTGACC  192

seq1  AAGCCTGACCCAGCACAGAGGGCCAAAATTCCTGCCACATGGTCTCTGCA  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGACCCAGCACAGAGGGCCAAAATTCCTGCCACATGGTCTCTGCA  242

seq1  CTCAAACCTCGTAGGAGGGTGAGCCGCACAGGTCTCATCTGGCTCAGTGA  291
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTCAAACCTCGTAGGA-GGTGAGCCGCACAGGTCTCATCTGGCTCAGTGA  291

seq1  TTCAGCTACAGTCACCCAGCCCAGGGGCAGCAAACAACGACTTCAGGCAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTACAGTCACCCAGCCCAGGGGCAGCAAACAACGACTTCAGGCAG  341

seq1  CTGCTGCACCCTGAGGGTCTGGCAAGTCCCTGACAGCTATTTCTAACTCC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCACCCTGAGGGTCTGGCAAGTCCCTGACAGCTATTTCTAACTCC  391

seq1  CAAGTGCGTCCCCCTTTGATGACAGCTACTTCTGGACACAGAGACAGAAC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCGTCCCCCTTTGATGACAGCTACTTCTGGACACAGAGACAGAAC  441

seq1  ATGGGTGAAGCCTGAGACCACCCTTCCTTTCCTCTGAGGCTGGGAACAGC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTGAAGCCTGAGACCACCCTTCCTTTCCTCTGAGGCTGGGAACAGC  491

seq1  CGCTTCTCCCAGAGGACTCAGAGGTCAGAGCAGCCTGAGAAGCAGGCCAT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTCTCCCAGAGGACTCAGAGGTCAGAGCAGCCTGAGAAGCAGGCCAT  541

seq1  GGGTTCGAATGTTTCTCTGGTAGCCATGGCCTGGAGCTGAGGCTGCAGCT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCGAATGTTTCTCTGGTAGCCATGGCCTGGAGCTGAGGCTGCAGCT  591

seq1  CAGCAGATGTTTCAGACAGCTGCAGTTGCTTCTAACACACCAGAGGCCCC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGATGTTTCAGACAGCTGCAGTTGCTTCTAACACACCAGAGGCCCC  641

seq1  CAGCCAGGAGGACCGGTGGAGAATGGATCTGCCTCTGCCATTGATCAGTA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGGAGGACCGGTGGAGAATGGATCTGCCTCTGCCATTGATCAGTA  691

seq1  CCTGAATAATACATCAAGGGCCTCTGACTTTAGCACAAAAGCCTGGCAGG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATAATACATCAAGGGCCTCTGACTTTAGCACAAAAGCCTGGCAGG  741

seq1  TCGGTCTCTGCAACCAAACTCCCTTGGGACCAGCCATGCCAGTGGCTATA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTCTCTGCAACCAAACTCCCTTGGGACCAGCCATGCCAGTGGCTATA  791

seq1  CCACTGGGCAGATTCTCAAATCAAGAGATGAATGGCAATTATATCTTCAG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGGCAGATTCTCAAATCAAGAGATGAATGGCAATTATATCTTCAG  841

seq1  CCCCTGTGCCCTGTGCCCTGGGGTTAGGCCCTCACCCCTACCAATGGCTG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGTGCCCTGTGCCCTGGGGTTAGGCCCTCACCCCTACCAATGGCTG  891

seq1  TCTCCTGGGAAGACAAGCTGCCCCTGCCCCTTGAGGTCAGTCACTAACAG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGGGAAGACAAGCTGCCCCTGCCCCTTGAGGTCAGTCACTAACAG  941

seq1  CGCCATGATCTCTCTCACTTCGCCTTTTCCAGAGCATCGTGCTGTTAGAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCATGATCTCTCTCACTTCGCCTTTTCCAGAGCATCGTGCTGTTAGAA  991

seq1  TCATGCACAGAGCTTTTCCAGGCTGGGCTTCTCAACTTTTTTTTTTCTTT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCACAGAGCTTTTCCAGGCTGGGCTTCTCAACTTTTTTTTTTCTTT  1041

seq1  TTTTAAACATACATAAGTTTTTTTTAAAGGGGGAAACTTTGTGTCACCCT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAACATACATAAGTTTTTTTTAAAGGGGGAAACTTTGTGTCACCCT  1091

seq1  CACAGGTGGGATCTCAGATTTCCCTGCTAAAACTACGAGGAAGTCACATG  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTGGGATCTCAGATTTCCCTGCTAAAACTACGAGGAAGTCACATG  1141

seq1  GATATCAGCAAGAATGGAGAATTC  1165
      ||||||||||||||||||||||||
seq2  GATATCAGCAAGAATGGAGAATTC  1165