BAC Information

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BAC

Clone NameB6Ng01-347E09
Chromosome2 (Build37)
Map Location 125,944,283 - 125,945,465
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043375, Slc12a1, Dut, A530010F05Rik, LOC100043698, Fbn1, Cep152, Shc4, Eid1, 3110001I20Rik, Cops2, Galk2, Fgf7
Downstream geneDtwd1, Atp8b4, Slc27a2, Hdc, Gabpb1, Usp8, LOC100043714, Usp50, Trpm7, 2010106G01Rik, Ap4e1, Blvra, Ncaph
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347E09.bB6Ng01-347E09.g
ACCGA128924GA128925
length1,172890
definitionB6Ng01-347E09.b B6Ng01-347E09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtaacatattggtgtatctaatcttatgcagtgagccatgaac
atcttcgttactcaatgatcacatatgatcagtggagcatttagttcata
gcttattcattatgtataatataacctagttgttttcttttaaattgact
aaaagattataagagtaaaataaaaatgatattatataggtaaatagaac
aaaaccaagaatatacaaagaagtcaccagtttcctaacagagtaactgt
agaactactgtggtactagactagagaacacagtattcaggataatggtc
atggtggtaaaacttaaaaaaaattctattatttatatcagacaaattct
tgttgaaaggtaatcaaaatatgctcatatatttaaacaaaacatatttt
atatactatgaagataattattgtgtctgttaagttttaacatttacctt
aaagaatgcatcctttctccttagaggtatttttatgaaaagtgtgacat
aactttctgcaattctatcaaacaagaaatcttcatctcttttgtcaggc
ttaaagaagacacatatatgaaattagtgccaattacaatttatattaga
aagttatatatacaatattattacatgtaatgtagtctgtatataatata
tgagaatatagtctattctcaaagggtagttcagctatttaacttgaggg
gccatttgtttcagcaacacagagtggagttgtaatggcagctctgtcat
ttattagttgtacttcattggccgggattatggcctaatttcctagatga
cagccatatatatctgtcatatctagaaaagaatagtaaaattacactag
ggccaagaaaacattttacatcattctgtatttcaaacccttagcatagt
atctagaacacagaaagcatgcagacatctgtagaatgagtgaagatagt
agctaccatgctagaaaaatcaacaactatataactatagtccttttata
tttcagaaatacctgagtgcccttttataggcctgaagattttcattttc
tttaatgggtggattctaattcttctacttttgtcttcaagccctgatat
tctctcttccacccattaacctttgggggaggtacctcctctgagcttat
taactatgatgccatctcaaat
gaattcctctggggtttcaatttgttttcggagagagataatctttgaat
cccttaaaaacacaagagtacagtagtttagaatactttagaaatggagc
acaatttgtcgagtaaccagatgcttcctgttttaaactcttgtgcctct
cttgttcttttagtctctaggtctcctcagattcattatttttttttaaa
gtacttctgtttgttacattctccagaaatattaaatcagaatgtaactg
atcttccttggaaagcctctgttctcaacatgtgccattgatagttcaga
gaacctacctcagcaggaagatggcatcaagtgagggatgggcttgctgt
cctacagtcaaaactctgacccataattgttcctgtctaaaagaacggca
gggttgaaagtggagagaagcctgaggaaaaggcggtccagtgacatgcc
caaggtgggatccagctcaaggggaggccccatggcctgacactattacg
gaggctatggagagctcacaaaaagggacctgccatgactgccctccgaa
agatccaacaagcagctgaaagagtcagaggcagatatttgcacccaccc
aatggactgaggctgctgacccctatggttgaattaggggaaagctggaa
gaagctgaggaggagagtgaccctgtaggaggaccagcagtctcagttaa
cctgacccctgtgacctctcaagcactggaacaacaaccaggcagcatac
accagctgatatgaggcccccaacacagatacagcagaggactgctgggt
ctgggttcaatgagagaagatgtacttaatcctcaagagactggaggcca
caggaagtttagatgtttgatagggtggggggtggggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_125944283_125945465
seq2: B6Ng01-347E09.b_53_1224

seq1  GAATTCTGTAACATATTGGTGTATCTAATCTTATGCAGTGAGCCATGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAACATATTGGTGTATCTAATCTTATGCAGTGAGCCATGAAC  50

seq1  ATCTTCGTTACTCAATGATCACATATGATCAGTGGAGCATTTAGTTCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCGTTACTCAATGATCACATATGATCAGTGGAGCATTTAGTTCATA  100

seq1  GCTTATTCATTATGTATAATATAACCTAGTTGTTTTCTTTTAAATTGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATTCATTATGTATAATATAACCTAGTTGTTTTCTTTTAAATTGACT  150

seq1  AAAAGATTATAAGAGTAAAATAAAAATGATATTATATAGGTAAATAGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTATAAGAGTAAAATAAAAATGATATTATATAGGTAAATAGAAC  200

seq1  AAAACCAAGAATATACAAAGAAGTCACCAGTTTCCTAACAGAGTAACTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAGAATATACAAAGAAGTCACCAGTTTCCTAACAGAGTAACTGT  250

seq1  AGAACTACTGTGGTACTAGACTAGAGAACACAGTATTCAGGATAATGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTACTGTGGTACTAGACTAGAGAACACAGTATTCAGGATAATGGTC  300

seq1  ATGGTGGTAAAACTTAAAAAAAATTCTATTATTTATATCAGACAAATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGTAAAACTTAAAAAAAATTCTATTATTTATATCAGACAAATTCT  350

seq1  TGTTGAAAGGTAATCAAAATATGCTCATATATTTAAACAAAACATATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAAGGTAATCAAAATATGCTCATATATTTAAACAAAACATATTTT  400

seq1  ATATACTATGAAGATAATTATTGTGTCTGTTAAGTTTTAACATTTACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTATGAAGATAATTATTGTGTCTGTTAAGTTTTAACATTTACCTT  450

seq1  AAAGAATGCATCCTTTCTCCTTAGAGGTATTTTTATGAAAAGTGTGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATGCATCCTTTCTCCTTAGAGGTATTTTTATGAAAAGTGTGACAT  500

seq1  AACTTTCTGCAATTCTATCAAACAAGAAATCTTCATCTCTTTTGTCAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCTGCAATTCTATCAAACAAGAAATCTTCATCTCTTTTGTCAGGC  550

seq1  TTAAAGAAGACACATATATGAAATTAGTGCCAATTACAATTTATATTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAAGACACATATATGAAATTAGTGCCAATTACAATTTATATTAGA  600

seq1  AAGTTATATATACAATATTATTACATGTAATGTAGTCTGTATATAATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATATATACAATATTATTACATGTAATGTAGTCTGTATATAATATA  650

seq1  TGAGAATATAGTCTATTCTCAAAGGGTAGTTCAGCTATTTAACTTGAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATATAGTCTATTCTCAAAGGGTAGTTCAGCTATTTAACTTGAGGG  700

seq1  GCCATTTGTTTCAGCAACACAGAGTGGAGTTGTAATGGCAGCTCTGTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTGTTTCAGCAACACAGAGTGGAGTTGTAATGGCAGCTCTGTCAT  750

seq1  TTATTAGTTGTACTTCATTGGCCGGGATTATGGCCTAATTTCCTAGATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGTTGTACTTCATTGGCCGGGATTATGGCCTAATTTCCTAGATGA  800

seq1  CAGTCATATATATCTGTCATATCTAGAAAAGAATAGTAAAATTACACTAG  850
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATATATATCTGTCATATCTAGAAAAGAATAGTAAAATTACACTAG  850

seq1  GGCCAAGAAAACATTTTACATCATTCTGTATTTCAAACCCTTAGCATAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGAAAACATTTTACATCATTCTGTATTTCAAACCCTTAGCATAGT  900

seq1  ATCTAGAACACAGAAAGCATGCAGACATCTGTAGAATGAGTGAAGATAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAACACAGAAAGCATGCAGACATCTGTAGAATGAGTGAAGATAGT  950

seq1  AGCTACCATGCTAGAAAAAATCAACAACTATATAACTATAGTCCTTTTAT  1000
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGCTACCATGCTAG-AAAAATCAACAACTATATAACTATAGTCCTTTTAT  999

seq1  ATTTCAG-AATACCTGAGTGCCCCTTTTATAGGGCCTTGAAAGATTTTTC  1049
      ||||||| |||||||||||| |||||||||| |||||   |||| |||||
seq2  ATTTCAGAAATACCTGAGTG-CCCTTTTATA-GGCCT--GAAGA-TTTTC  1044

seq1  ATTTTCTTTTAATTGAGTG--ATCTAATTCTTCTAC-TTTGTCTTCAAGC  1096
      |||||||||  | || |||   |||||||||||||| |||||||||||||
seq2  ATTTTCTTT--AATGGGTGGATTCTAATTCTTCTACTTTTGTCTTCAAGC  1092

seq1  CCTGATATTCTCTCTTCCACTCAATTTATACCTTT-GGTGAGGTA-CTCC  1144
      |||||||||||||||||||| ||  ||| |||||| || |||||| ||||
seq2  CCTGATATTCTCTCTTCCACCCA--TTA-ACCTTTGGGGGAGGTACCTCC  1139

seq1  TCTGAGCTTATTAAACTTAATGAATTGCCCATCTCAAAT  1183
      |||||||||||| ||||  ||||  || |||||||||||
seq2  TCTGAGCTTATT-AACT--ATGA--TG-CCATCTCAAAT  1172