BAC Information

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BAC

Clone NameB6Ng01-347L19
Chromosome2 (Build37)
Map Location 47,301,336 - 47,302,463
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC383691, LOC100041457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347L19.bB6Ng01-347L19.g
ACCGA129250GA129251
length1,1221,215
definitionB6Ng01-347L19.b B6Ng01-347L19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggttagaagttataaggtggaaattccatcacattcatattg
taaaagagctgtgggaatttagaaaccaaaataaacaaatttatttatct
tttaaacaaattaattttgaatttaatatgaaaattttggtatacatcag
ttgtattcaaaggattttttccagcagcattttttttttcttcgctgaca
gcccaagtgacatgctcaaagttagaaataatgagagcccagggttcact
gtccctccaactggattccctttcacacagagaatgtggaaatgccacac
tacttgaatactgaactgaatctcaggggctcactctactaaaactctgt
gatttttcagtcagaaggtctaattcagttttataccctctctaggcctt
aacaggatgactcaatattataaattgagaaatgcatgatactctgccac
ttggagaaaaaaaactgtagcccagccatttgtactgttcttttcatgta
aacagagctaatcctacacaagctctccaagattgccaaggagagtatgc
taaaccatcaacagttaagttgctattcattaaccttatctgttgtgttt
taaaaacatcattgaaaatcatcagcagatgagtgttcagactatagtgc
tattgatatttattcttatgtttgctttgctctttggggtcaaaaaacaa
gccaaaaagcccaggaaggcaccaaggcaatggggccatgtctatataaa
gaagactttcattaaccttactaacccaccataatttcaaatgtcagtag
ctaatcagagactagctgacatcaccaatggatagaaaggaaagatgtcc
tgcgggatctatcttttctctaaatctgaaatatatatttataacaccac
agggttacatttgctctgaagtaatagtgggaaaatttcccttccactat
tgaaatacaagcttctaatgctaaagttaatgattaattttgacagagca
gcaaaaacatttatttaaatgttcagaaactgactacattattggcttct
ctggtactaaattcttctatggcatttgacacatgggcagctgtatgttg
ctgagtatcaggatagggagaa

gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaaaatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcccagagaactcctaaaccagataaacagctttcggtgagtagctgga
tataaataaactcaaacaagtcaatgggccttctctacacaaagaataaa
caggctgagaagaaattaggaaacacacccttctcaatagtcacaaataa
taataaaatatcttggcgtgactctaactaggaagtgaaagatctgtatg
atgaaaacttcaaatctcttgaagaaggaattaggagattctagaagatg
aaagatctccattgctcatgaattgcaggattcacattgtaatgctatct
tgccaagccaatctacgagattcatgcaatccccactcacagatattgca
cacacttcagtagcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_47301336_47302463
seq2: B6Ng01-347L19.b_49_1170

seq1  GAATTCTAGGTTAGAAGTTATAAGGTGGAAATTCCATCACATTCATATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGTTAGAAGTTATAAGGTGGAAATTCCATCACATTCATATTG  50

seq1  TAAAAGAGCTGTGGGAATTTAGAAACCAAAATAAACAAATTTATTTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAGCTGTGGGAATTTAGAAACCAAAATAAACAAATTTATTTATCT  100

seq1  TTTAAACAAATTAATTTTGAATTTAATATGAAAATTTTGGTATACATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACAAATTAATTTTGAATTTAATATGAAAATTTTGGTATACATCAG  150

seq1  TTGTATTCAAAGGATTTTTTCCAGCAGCATTTTTTTTTTCTTCGCTGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTCAAAGGATTTTTTCCAGCAGCATTTTTTTTTTCTTCGCTGACA  200

seq1  GCCCAAGTGACATGCTCAAAGTTAGAAATAATGAGAGCCCAGGGTTCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAGTGACATGCTCAAAGTTAGAAATAATGAGAGCCCAGGGTTCACT  250

seq1  GTCCCTCCAACTGGATTCCCTTTCACACAGAGAATGTGGAAATGCCACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTCCAACTGGATTCCCTTTCACACAGAGAATGTGGAAATGCCACAC  300

seq1  TACTTGAATACTGAACTGAATCTCAGGGGCTCACTCTACTAAAACTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGAATACTGAACTGAATCTCAGGGGCTCACTCTACTAAAACTCTGT  350

seq1  GATTTTTCAGTCAGAAGGTCTAATTCAGTTTTATACCCTCTCTAGGCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTCAGTCAGAAGGTCTAATTCAGTTTTATACCCTCTCTAGGCCTT  400

seq1  AACAGGATGACTCAATATTATAAATTGAGAAATGCATGATACTCTGCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGATGACTCAATATTATAAATTGAGAAATGCATGATACTCTGCCAC  450

seq1  TTGGAGAAAAAAAACTGTAGCCCAGCCATTTGTACTGTTCTTTTCATGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGAAAAAAAACTGTAGCCCAGCCATTTGTACTGTTCTTTTCATGTA  500

seq1  AACAGAGCTAATCCTACACAAGCTCTCCAAGATTGCCAAGGAGAGTATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGCTAATCCTACACAAGCTCTCCAAGATTGCCAAGGAGAGTATGC  550

seq1  TAAACCATCAACAGTTAAGTTGCTATTCATTAACCTTATCTGTTGTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCATCAACAGTTAAGTTGCTATTCATTAACCTTATCTGTTGTGTTT  600

seq1  TAAAAACATCATTGAAAATCATCAGCAGATGAGTGTTCAGACTATAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACATCATTGAAAATCATCAGCAGATGAGTGTTCAGACTATAGTGC  650

seq1  TATTGATATTTATTCTTATGTTTGCTTTGCTCTTTGGGGTCAAAAAACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATATTTATTCTTATGTTTGCTTTGCTCTTTGGGGTCAAAAAACAA  700

seq1  GCCAAAAAGCCCAGGAAGGCACCAAGGCAATGGGGCCATGTCTATATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAAAGCCCAGGAAGGCACCAAGGCAATGGGGCCATGTCTATATAAA  750

seq1  GAAGACTTTCATTAACCTTACTAACCCACCATAATTTCAAATGTCAGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACTTTCATTAACCTTACTAACCCACCATAATTTCAAATGTCAGTAG  800

seq1  CTAATCAGAGACTAGCTGACATCACCAATGGATAGAAAGGAAAGATGTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCAGAGACTAGCTGACATCACCAATGGATAGAAAGGAAAGATGTCC  850

seq1  TGCGGGATCTATCTTTTCTCTAAATCTGAAATATATATTTATAACACCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGGATCTATCTTTTCTCTAAATCTGAAATATATATTTATAACACCAC  900

seq1  AGGGTTACATTTGCTCTGAAGTAATAGTGGGAAAATTTCCCTT-CACTAT  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGGGTTACATTTGCTCTGAAGTAATAGTGGGAAAATTTCCCTTCCACTAT  950

seq1  TGAAATACAAGCTTCTAATGCTAAAGTTAATGATTAATTTTGACAGAGCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATACAAGCTTCTAATGCTAAAGTTAATGATTAATTTTGACAGAGCA  1000

seq1  GCAAAAACATTTATTTAAATG-TCAGAAACTGACTACATTATTGGCTTCT  1048
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCAAAAACATTTATTTAAATGTTCAGAAACTGACTACATTATTGGCTTCT  1050

seq1  CTGGTACTAAATTCTCCTATGGCATTTTGACAACATGGGCAGCTGTAATG  1098
      ||||||||||||||| |||||||| |||||| |||||||||||||| |||
seq2  CTGGTACTAAATTCTTCTATGGCA-TTTGAC-ACATGGGCAGCTGT-ATG  1097

seq1  TTTGGCTGAGTAATCCAGGGATAGGGAGAA  1128
      ||  ||||||| |||   ||||||||||||
seq2  TT--GCTGAGT-ATC--AGGATAGGGAGAA  1122


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