BAC Information

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BAC

Clone NameB6Ng01-348J15
Chromosome2 (Build37)
Map Location 150,643,194 - 150,644,145
singlet/doubletsinglet
Overlap genePygb
Upstream geneC530025M09Rik, OTTMUSG00000015750, LOC279056, Zfp120, EG245174, 3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik, Acss1, Vsx1, Entpd6, LOC100043605
Downstream geneAbhd12, Gins1, LOC668925, 4930519N13Rik, LOC668926, Nanp, LOC433486, LOC381390, 4930442J19Rik, LOC100043839, LOC100043840, 4921509C19Rik, Nsfl1c, Fkbp1a, Sdcbp2, Snph, LOC668929, BC052486, 5430405G05Rik, Psmf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348J15.bB6Ng01-348J15.g
ACCGA129848GA129849
length9541,146
definitionB6Ng01-348J15.b B6Ng01-348J15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacccagggcgctgatttggctgtgatgggtactcagctctcc
agggaaagaatgggagggagagccaggtggtggtgcacacctttaatcct
accattcaggaggcagaggcaggcatatctctgagtttgaggccagccta
ggctacacagagaaactctatctcacaaaaaaaagcaaaaaaaaagcaaa
aaaaaaaacaggagaaagaaattccttaatgctatcatactcctcattgc
agggtccagaggacagaaggacagtcagcccgcatgggacatccttagta
cccaacctacagcagatgcagcttaacttgacacaaccaaaaaggcagga
acacaagaggagtgactctggcagccaaaagaggtgtctctccaatgtca
cccatcaagtcacctgtgaacatactggtgtgtgatatggtgggggcttt
gggcacctccatcatgcccacaagtgactgagtggtacagaggctatatg
tcaaaccttgttcatggtatgtatggtggccaaatcagagttaggctggg
tatgagagaggagccccacccacccacccccgacttagtgcagagccccc
ccactcacacagactgcttcacgatctcagagtgaatccttgccaccccg
ttcacagcgtgggacccaatcacacacaggtgtgccatgtttgattctct
tgcagtccccttcctcaatcacggacatcctcctcagtcggtccacgtcc
cccaggaaacagggcagccacgtgctgaagccagaacacagggctgagca
tccctcagcaactgaggtgctagctacttgcctggggacagcccaccacg
cccaaagaaagggtccactggcctttcaccaaatcctagctcagacgtat
cacggtggccctgaatcaaatattttacccatatagatcctgggacctat
agga
gaattctctcttgctcttcggttgttaaaagcatctgtaaccgctgttga
cagtaatcccaagtaggctgatgagagaacataaggaactccgccaaccc
tgtgaggcgttggggatcctgagaaagggggtggttagttttccagttat
aaataccagcagaggaaaatgaccagtactgaagggtttaaagtttgggc
gggtccaccagagtccgcccggactctgctctgtgggtcgctgtggctct
atgtactcacagcggtccgcctctcaacgccccgaggggtttggggttcc
ctcggcggctggggtcgaggctgtggataaggggaaggttgtggactagg
ccactcaggaggctttatagattttagaggagccgatttagctggtggct
ccaattcaggagaagccttcaatttctcttgtaacatgagagcacaacca
caattttgagaagcaaaacccaattttaacagtgtaaacaatctagtttc
tttaaaaatgaactccaaaaacattacttgctacaaagtttggctgtccg
ttcctgcacacaaacacaagaaggtgtagccgccaatatatctcaaagac
actaccctaaatcttatcttttataaatcagatttctaggataagaatta
cacagaatattacccaattcaggcgtatctttagagacctgttcccatgg
gttgtctcatgctgcatgttgtagttctaaattactctaacccagagtta
ccagttttaagtcaactttttgttaccaatgttacaaatttttaatcata
accaataacttatgagccactaatctataaccaagacatataaaacatat
tatactttttgaaactatttagaaacaaaaatgaaatggccatatacatt
tgcccatttaaacccaacaaaattcttaatttttttttctagctgtaaat
tcagagaggagcatccttgtcaccttgaatgaatccaatttttgtaggaa
aaaacagccatctgttcctttaccatagaactttgagaagctggcttgtt
ccctataagacagccattttatattcaatgctagccaagcctttctagtc
actagattctactacaggggtcaaggttttaagaaacccaatagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_150643194_150644145
seq2: B6Ng01-348J15.b_48_1001 (reverse)

seq1  TCCTATAGGTCCCAGGATCTTATATGGGTGAAATATTTGATTCAGGGCCC  50
      ||||||||||||||||||| ||||||||| ||||||||||||||||||| 
seq2  TCCTATAGGTCCCAGGATC-TATATGGGTAAAATATTTGATTCAGGGCCA  49

seq1  CCGTGAATACGTCTGAGCTAGGATTTGGTTGAAGG-CGGTGGACCC-TTC  98
      ||||| |||||||||||||||||||||||  |||| | |||||||| |||
seq2  CCGTG-ATACGTCTGAGCTAGGATTTGGTGAAAGGCCAGTGGACCCTTTC  98

seq1  TTTGGGCGTGGTGGGCTGTCCCCAGGC-AGTAGCTAGCACCTCAGTTGCT  147
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTTGGGCGTGGTGGGCTGTCCCCAGGCAAGTAGCTAGCACCTCAGTTGCT  148

seq1  GAGGGATGCTCAGCCCTGTGTTCTTGGCTTCAGCACGTGGCTGCCCTGTT  197
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAGGGATGCTCAGCCCTGTGTTC-TGGCTTCAGCACGTGGCTGCCCTGTT  197

seq1  TCCT-GGGGACGTGGACCGACTGAGGAGGATGTCCGTGATTGAGGAAGGG  246
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGGGACGTGGACCGACTGAGGAGGATGTCCGTGATTGAGGAAGGG  247

seq1  GACTGCAAGAGAATC-AACATGGCACACCTGTGTGTGATTGGGTCCCACG  295
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GACTGCAAGAGAATCAAACATGGCACACCTGTGTGTGATTGGGTCCCACG  297

seq1  CTGTGAACGGGGTGGCAAGGATTCACTCTGAGATCGTGAAGCAGTCTGTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAACGGGGTGGCAAGGATTCACTCTGAGATCGTGAAGCAGTCTGTG  347

seq1  TGAGTGGGGGGGCTCTGCACTAAGTCGGGGGTGGGTGGGTGGGGCTCCTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGGGGGGCTCTGCACTAAGTCGGGGGTGGGTGGGTGGGGCTCCTC  397

seq1  TCTCATACCCAGCCTAACTCTGATTTGGCCACCATACATACCATGAACAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATACCCAGCCTAACTCTGATTTGGCCACCATACATACCATGAACAA  447

seq1  GGTTTGACATATAGCCTCTGTACCACTCAGTCACTTGTGGGCATGATGGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGACATATAGCCTCTGTACCACTCAGTCACTTGTGGGCATGATGGA  497

seq1  GGTGCCCAAAGCCCCCACCATATCACACACCAGTATGTTCACAGGTGACT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCCAAAGCCCCCACCATATCACACACCAGTATGTTCACAGGTGACT  547

seq1  TGATGGGTGACATTGGAGAGACACCTCTTTTGGCTGCCAGAGTCACTCCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGTGACATTGGAGAGACACCTCTTTTGGCTGCCAGAGTCACTCCT  597

seq1  CTTGTGTTCCTGCCTTTTTGGTTGTGTCAAGTTAAGCTGCATCTGCTGTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTTCCTGCCTTTTTGGTTGTGTCAAGTTAAGCTGCATCTGCTGTA  647

seq1  GGTTGGGTACTAAGGATGTCCCATGCGGGCTGACTGTCCTTCTGTCCTCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGGTACTAAGGATGTCCCATGCGGGCTGACTGTCCTTCTGTCCTCT  697

seq1  GGACCCTGCAATGAGGAGTATGATAGCATTAAGGAATTTCTTTCTCCTGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCTGCAATGAGGAGTATGATAGCATTAAGGAATTTCTTTCTCCTGT  747

seq1  TTTTTTTTTTGCTTTTTTTTTGCTTTTTTTTGTGAGATAGAGTTTCTCTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTGCTTTTTTTTTGCTTTTTTTTGTGAGATAGAGTTTCTCTG  797

seq1  TGTAGCCTAGGCTGGCCTCAAACTCAGAGATATGCCTGCCTCTGCCTCCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCTAGGCTGGCCTCAAACTCAGAGATATGCCTGCCTCTGCCTCCT  847

seq1  GAATGGTAGGATTAAAGGTGTGCACCACCACCTGGCTCTCCCTCCCATTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGTAGGATTAAAGGTGTGCACCACCACCTGGCTCTCCCTCCCATTC  897

seq1  TTTCCCTGGAGAGCTGAGTACCCATCACAGCCAAATCAGCGCCCTGGGTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTGGAGAGCTGAGTACCCATCACAGCCAAATCAGCGCCCTGGGTG  947

seq1  AGAATTC  952
      |||||||
seq2  AGAATTC  954