BAC Information

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BAC

Clone NameB6Ng01-349M03
Chromosome2 (Build37)
Map Location 93,997,585 - 93,998,708
singlet/doubletsinglet
Overlap geneHsd17b12
Upstream geneTrp53i11, C230071H18Rik, Tspan18, LOC100042789, LOC639658, Cd82, Alx4, Ext2, 2610203E10Rik, Gm1967, Gm1335, LOC620695, Alkbh3
Downstream geneE530001K10Rik, Ttc17, Itpa-ps1, Api5, LOC100043259
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349M03.g
ACCGA130653
length1,125
definitionB6Ng01-349M03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccgaattattgggaacaagtataaagttcattgtgggagctaagg
cagtcattcaaaaaaatggagcgaaagcgtgctctgcagacaaaggggaa
ccgtaaaccttcatctgaaaagtctgaggaattaacaatccgaaagcggt
tattactaagacgtaatcacaagcactactccagctcctcccggacttct
actatattcttccctttccggttccattccttcctgaaatgtgagctaaa
cccagttaggtatcactggccaatcagcgcgcagccttccgcagtcgtaa
gggccgcctctgccaatgagagatccctgcgcttcggtggtgcgaggtaa
agcttgtgggcggagccaaacgttgagcggcttgtgagcgagccactgtc
ttaatacggaaatgcggctctgagcgcgccgaaggggattgtgggcgggg
ctacgaaacgaaggctaaccaataggagacatagtacgcttacaggaaag
agaagtcaccaatagacacatggatatgactatgtaggcgggtcttagac
ctaaagcgttcaaaaaatcacgtctattcgctgcgtcttcgccgtcacgg
cggcaccgcctcctcgtcccattcattctttttttttttttccttcccca
ttcaccgtagtagtgaggcctagtcacgagccatggagtgcgctcccccg
gcggccggcttcctgttactgggtgggcgcgagcaccattgcctacctgg
ccctgcgagcctcgtactcgctcttcagggccttccaggtgtggtgcgtg
ggcaacgaggccttggtcggtccgcgactcggagaatgggcaggtgagtg
gaaccacaagccgcgaccacgctgtggcccttgttcccctgtcgctcgcg
ctcagcgagcccgctctggagcgcggaaacttctccagaccctgagcgca
ctggcggggtgggtgatctgacctgctgctgccttggtgggcacggagga
gaacctttctttactccccggtacttgttcctgttggagccttcctgggc
agcgccggagtcaggcgcattgaccgctggtgtccctgcagtgttaattt
atttttaaattaaagttttcacttg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_93997585_93998708
seq2: B6Ng01-349M03.g_70_1194 (reverse)

seq1  CAAGTGAAAAACTTTATTTTAAAAAATAAATAAACACTGCAAGGGACA-C  49
      |||||| ||||||||| ||| |||||||||| |||||||| ||||||| |
seq2  CAAGTG-AAAACTTTAATTT-AAAAATAAATTAACACTGC-AGGGACACC  47

seq1  AGCGGACAATGCGCCTGACTCCGGCCGCCTGCCCAGGAGGGCTCCAACAG  99
      ||||| |||||||||||||||||||   |||||||||| |||||||||||
seq2  AGCGGTCAATGCGCCTGACTCCGGC--GCTGCCCAGGAAGGCTCCAACAG  95

seq1  G-ACAAGT-CCGGGGAGTTAAGAAAGG-TCTCCTCCGTGCCCACC-AGGC  145
      | |||||| ||||||||| |||||||| ||||||||||||||||| ||||
seq2  GAACAAGTACCGGGGAGTAAAGAAAGGTTCTCCTCCGTGCCCACCAAGGC  145

seq1  AGCAGCAGGTCAGATCACCCACCCCGCCAGTGCGCTCAGGGTCTGGAGAA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCAGGTCAGATCACCCACCCCGCCAGTGCGCTCAGGGTCTGGAGAA  195

seq1  GTTTCCGCGCTCCAGAGCGGGCTCGCTGAGCGCGAGCGACAGGGGAACAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCGCGCTCCAGAGCGGGCTCGCTGAGCGCGAGCGACAGGGGAACAA  245

seq1  GGGCCACAGCGTGGTCGCGGCTTGTGGTTCCACTCACCTGCCCATTCTCC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCACAGCGTGGTCGCGGCTTGTGGTTCCACTCACCTGCCCATTCTCC  295

seq1  GAGTCGCGGACCGACCAAGGCCTCGTTGCCCACGCACCACACCTGGAAGG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCGCGGACCGACCAAGGCCTCGTTGCCCACGCACCACACCTGGAAGG  345

seq1  CCCTGAAGAGCGAGTACGAGGCTCGCAGGGCCAGGTAGGCAATGGTGCTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAAGAGCGAGTACGAGGCTCGCAGGGCCAGGTAGGCAATGGTGCTC  395

seq1  GCGCCCACCCAGT-ACAGGAAGCCGGCCGCCGGGGGAGCGCACTCCATGG  444
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GCGCCCACCCAGTAACAGGAAGCCGGCCGCCGGGGGAGCGCACTCCATGG  445

seq1  CTCGTGACTAGGCCTCACTACTACGGTGAATGGGGAAGGAAAAAAAAAAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTGACTAGGCCTCACTACTACGGTGAATGGGGAAGGAAAAAAAAAAA  495

seq1  AAGAATGAATGGGACGAGGAGGCGGTGCCGCCGTGACGGCGAAGACGCAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGAATGGGACGAGGAGGCGGTGCCGCCGTGACGGCGAAGACGCAG  545

seq1  CGAATAGACGTGATTTTTTGAACGCTTTAGGTCTAAGACCCGCCTACATA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATAGACGTGATTTTTTGAACGCTTTAGGTCTAAGACCCGCCTACATA  595

seq1  GTCATATCCATGTGTCTATTGGTGACTTCTCTTTCCTGTAAGCGTACTAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATCCATGTGTCTATTGGTGACTTCTCTTTCCTGTAAGCGTACTAT  645

seq1  GTCTCCTATTGGTTAGCCTTCGTTTCGTAGCCCCGCCCACAATCCCCTTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTATTGGTTAGCCTTCGTTTCGTAGCCCCGCCCACAATCCCCTTC  695

seq1  GGCGCGCTCAGAGCCGCATTTCCGTATTAAGACAGTGGCTCGCTCACAAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCGCTCAGAGCCGCATTTCCGTATTAAGACAGTGGCTCGCTCACAAG  745

seq1  CCGCTCAACGTTTGGCTCCGCCCACAAGCTTTACCTCGCACCACCGAAGC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTCAACGTTTGGCTCCGCCCACAAGCTTTACCTCGCACCACCGAAGC  795

seq1  GCAGGGATCTCTCATTGGCAGAGGCGGCCCTTACGACTGCGGAAGGCTGC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGATCTCTCATTGGCAGAGGCGGCCCTTACGACTGCGGAAGGCTGC  845

seq1  GCGCTGATTGGCCAGTGATACCTAACTGGGTTTAGCTCACATTTCAGGAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTGATTGGCCAGTGATACCTAACTGGGTTTAGCTCACATTTCAGGAA  895

seq1  GGAATGGAACCGGAAAGGGAAGAATATAGTAGAAGTCCGGGAGGAGCTGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGGAACCGGAAAGGGAAGAATATAGTAGAAGTCCGGGAGGAGCTGG  945

seq1  AGTAGTGCTTGTGATTACGTCTTAGTAATAACCGCTTTCGGATTGTTAAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTGCTTGTGATTACGTCTTAGTAATAACCGCTTTCGGATTGTTAAT  995

seq1  TCCTCAGACTTTTCAGATGAAGGTTTACGGTTCCCCTTTGTCTGCAGAGC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGACTTTTCAGATGAAGGTTTACGGTTCCCCTTTGTCTGCAGAGC  1045

seq1  ACGCTTTCGCTCCATTTTTTTGAATGACTGCCTTAGCTCCCACAATGAAC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTTTCGCTCCATTTTTTTGAATGACTGCCTTAGCTCCCACAATGAAC  1095

seq1  TTTATACTTGTTCCCAATAATTCGGAATTC  1124
      ||||||||||||||||||||||||||||||
seq2  TTTATACTTGTTCCCAATAATTCGGAATTC  1125