BAC Information

Click to search

BAC

Clone NameB6Ng01-349M21
Chromosome2 (Build37)
Map Location 76,881,700 - 77,011,307
singlet/doubletdoublet
Overlap gene2610301F02Rik
Upstream genePde11a, Cyct, Drbp1, Osbpl6, Prkra, Dfnb59, Fkbp7, Plekha3, Ttn
Downstream geneSestd1, LOC623706, LOC667906, Zfp533, BC003993, LOC667920
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349M21.bB6Ng01-349M21.g
ACCGA130684GA130685
length352810
definitionB6Ng01-349M21.b B6Ng01-349M21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,881,700 - 76,882,051)(77,010,473 - 77,011,307)
sequence
ctcaaagcctatacatattaagtagtaacagacagatgcatcttaagttt
ttcaacaaaacccaaaaatccagtagtgtatgtttgtaagtcaggactgg
gaagatggaggcaaaaagaccagaagttcaagattacccaaggagctaaa
ggggtctgcaaccctattggaggaacaacaatatgaactaaccagtaccc
cccagagctcgtgtctctagctgcatatgtagcagaagatggcctagtcg
gccatcattgggaagagaggccccttggtcttgcaaactttatatgcctc
agtacaggggaacaccagggccaagaagtgggagtgggtgggtaggggag
tg
gaattcatgacaagctatgtaactaagcattattctagatcggtggttct
caacctgtgggttatggcccctttgggggtcaaatgaccctttcacaggg
gtcacctaaaacgataggagaacacagatatttaccttatgattcataac
agtagcaaaactccagttatgaagttgcaatgaaaataattttatggttg
tgggtcaccacaacataaacaacggtattagggggtcacagcattaggaa
ggttgagaagaactgctttagaggacgagtctagaaaatagatattgatg
ctgtgatctgagtcacatggtttctgtagattactaaattactgggaggt
agagtccaaaaaagaaaaaaaggcaaaatataattatttaagtctttttc
aagtcttaagatcaggcaggaatctgagtaataattagaaagaatccact
ttaacggatgcatgctgtttgccttaatgttcgtgtccaccaaagtagag
aacccttttttttttttttcctttttttcattcagcaccctggatctgct
ccatctaattaagaagaaaggtcatccacacacaaaatatgttgctgacc
ggctggattaatctttaacaaagtcctacttctgatcaccttgccttaag
cctgggtttaactagccttcagcccgtgctctccttttgcatctctccct
ctttcgtcaactgacgccattccagagtccttgctgtcttcaaacctttg
accagtcttccattctaagtgagcttttgaatggagagcgaatagcctgg
tcttgcagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_76881700_76882051
seq2: B6Ng01-349M21.b_53_404

seq1  CTCAAAGCCTATACATATTAAGTAGTAACAGACAGATGCATCTTAAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGCCTATACATATTAAGTAGTAACAGACAGATGCATCTTAAGTTT  50

seq1  TTCAACAAAACCCAAAAATCCAGTAGTGTATGTTTGTAAGTCAGGACTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACAAAACCCAAAAATCCAGTAGTGTATGTTTGTAAGTCAGGACTGG  100

seq1  GAAGATGGAGGCAAAAAGACCAGAAGTTCAAGATTACCCAAGGAGCTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGGAGGCAAAAAGACCAGAAGTTCAAGATTACCCAAGGAGCTAAA  150

seq1  GGGGTCTGCAACCCTATTGGAGGAACAACAATATGAACTAACCAGTACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCTGCAACCCTATTGGAGGAACAACAATATGAACTAACCAGTACCC  200

seq1  CCCAGAGCTCGTGTCTCTAGCTGCATATGTAGCAGAAGATGGCCTAGTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGCTCGTGTCTCTAGCTGCATATGTAGCAGAAGATGGCCTAGTCG  250

seq1  GCCATCATTGGGAAGAGAGGCCCCTTGGTCTTGCAAACTTTATATGCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCATTGGGAAGAGAGGCCCCTTGGTCTTGCAAACTTTATATGCCTC  300

seq1  AGTACAGGGGAACACCAGGGCCAAGAAGTGGGAGTGGGTGGGTAGGGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGGGGAACACCAGGGCCAAGAAGTGGGAGTGGGTGGGTAGGGGAG  350

seq1  TG  352
      ||
seq2  TG  352

seq1: chr2_77010473_77011307
seq2: B6Ng01-349M21.g_68_877 (reverse)

seq1  AGCTGCAAAGAGCGCAGGCTAAATCAGCTGCTCCATTCACAAAGCTTCAC  50
      |||||||   ||  ||||||  ||  ||| ||||||||| ||||| ||||
seq2  AGCTGCA---AGACCAGGCT--ATTCGCT-CTCCATTCA-AAAGC-TCAC  42

seq1  TTAGGATGGAAGACTGTGTGCAAAGGTTTGGAGGACAGCGAGGGACTTCT  100
      |||| ||||||||||| || ||||||||| || |||||| | |||| |||
seq2  TTAGAATGGAAGACTG-GT-CAAAGGTTT-GAAGACAGC-AAGGAC-TCT  87

seq1  GGAAATGGCGGTCAGTTAGACAGAAAGGAGGGAGAGATGGCGAAAAGGAG  150
      || |||||| ||||||| ||| |||| ||||||||||||   ||||||||
seq2  GG-AATGGC-GTCAGTT-GAC-GAAA-GAGGGAGAGATG--CAAAAGGAG  130

seq1  AGCACGGGGCTGGAAGGCTAGTTAAACCCAAGGCTTAAGGGCAAGGTGAA  200
      ||||| ||||| ||||||||||||||||| |||||||| ||||||||| |
seq2  AGCAC-GGGCT-GAAGGCTAGTTAAACCC-AGGCTTAA-GGCAAGGTG-A  175

seq1  TCAGAAGTAGGACTTTGTTAAAAGATTAATCCAGCCGGTCAGCAACATAT  250
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCAGAAGTAGGACTTTGTT-AAAGATTAATCCAGCCGGTCAGCAACATAT  224

seq1  TTTGTGTGTGGATGACCTTTC-TCTTAATTAGATGGAGCAGATCCAGGGT  299
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTGTGTGTGGATGACCTTTCTTCTTAATTAGATGGAGCAGATCCAGGGT  274

seq1  GCTGAATGAAAAAAAGGAAAAAAAAAAAAAAGGGTTCTCTACTTTGGTGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAATGAAAAAAAGGAAAAAAAAAAAAAAGGGTTCTCTACTTTGGTGG  324

seq1  ACACGAACATTAAGGCAAACAGCATGCATCCGTTAAAGTGGATTCTTTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGAACATTAAGGCAAACAGCATGCATCCGTTAAAGTGGATTCTTTCT  374

seq1  AATTATTACTCAGATTCCTGCCTGATCTTAAGACTTGAAAAAGACTTAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTACTCAGATTCCTGCCTGATCTTAAGACTTGAAAAAGACTTAAA  424

seq1  TAATTATATTTTGCCTTTTTTTCTTTTTTGGACTCTACCTCCCAGTAATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATATTTTGCCTTTTTTTCTTTTTTGGACTCTACCTCCCAGTAATT  474

seq1  TAGTAATCTACAGAAACCATGTGACTCAGATCACAGCATCAATATCTATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATCTACAGAAACCATGTGACTCAGATCACAGCATCAATATCTATT  524

seq1  TTCTAGACTCGTCCTCTAAAGCAGTTCTTCTCAACCTTCCTAATGCTGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGACTCGTCCTCTAAAGCAGTTCTTCTCAACCTTCCTAATGCTGTG  574

seq1  ACCCCCTAATACCGTTGTTTATGTTGTGGTGACCCACAACCATAAAATTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCTAATACCGTTGTTTATGTTGTGGTGACCCACAACCATAAAATTA  624

seq1  TTTTCATTGCAACTTCATAACTGGAGTTTTGCTACTGTTATGAATCATAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTGCAACTTCATAACTGGAGTTTTGCTACTGTTATGAATCATAA  674

seq1  GGTAAATATCTGTGTTCTCCTATCGTTTTAGGTGACCCCTGTGAAAGGGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATATCTGTGTTCTCCTATCGTTTTAGGTGACCCCTGTGAAAGGGT  724

seq1  CATTTGACCCCCAAAGGGGCCATAACCCACAGGTTGAGAACCACCGATCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGACCCCCAAAGGGGCCATAACCCACAGGTTGAGAACCACCGATCT  774

seq1  AGAATAATGCTTAGTTACATAGCTTGTCATGAATTC  835
      ||||||||||||||||||||||||||||||||||||
seq2  AGAATAATGCTTAGTTACATAGCTTGTCATGAATTC  810