BAC Information

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BAC

Clone NameB6Ng01-350J09
Chromosome2 (Build37)
Map Location 94,676,862 - 94,677,999
singlet/doubletsinglet
Overlap genenone
Upstream gene2610203E10Rik, Gm1967, Gm1335, LOC620695, Alkbh3, Hsd17b12, E530001K10Rik, Ttc17, Itpa-ps1, Api5, LOC100043259
Downstream geneLOC100042843
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350J09.bB6Ng01-350J09.g
ACCGA131210GA131211
length9761,140
definitionB6Ng01-350J09.b B6Ng01-350J09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttttgagccccatttttaatggggttatttaattt
tctggagtccaccttcttgagttctttataaatattggatattagtcctc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtgtcttttgccttgcagaagctttgcaacttttt
gaggtcccatttatcgatgctcgatcttacagcacatgccattgctgttc
tatttaggaatttttcccctgtgcccatatcttcgaggcttttccccact
ttctcctctataagtttcagtgtctctggtttcatgtggagttccttaat
ccacttagatttgaccttagtacaaggagataggaatggatcaatttgca
ttcttctacatgataaccgccagttgtgccagcaccatttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttgttaaagatcaagtg
accatagatgtgtgggttcatctctgggtcttcaattctgttccattggt
ctacttgtctgtcgctataccagtaccatgcagtttttatcacaattgct
cttaacaaataaggaatataaaagtattttcttagtataaaataaagaac
acaaataaaaatattttttcaacatattttcccgtaagattaaaaacaag
aacagaatcaaatctcaccatttaacaacttgttattccatgacaatatt
acattgttatcaaattacagtactccatgctattacatatcaatacccca
tgttattacataacaatactacattgttatgtgttagaggttcacaggat
aatgatcaaacgatcaagaagatgaaatgacatgtactcagattgaaaag
taaatgaaaatgtccttcctaatagatgacatgatcatcttagaaaattg
tagaagtcgacctaaactgctagatt

gaattctttttaaaattgtaattagaatacttttaaaaaatcatctgtta
gcatttttctaaccataaatttggcatctcctgacacaaggagaattaca
atggcagggagaaaggggcctgtgcaaacaaaacaaagacataaaatgta
atgagaaaaaaagcaggcagctcgttgtgactgtaaagaaaaggaaaact
ttagggaggcctgatttataggataattattattggctgatttagaaaac
agggacagagagatgaatttgttgaagtgaatattttgtaaactggtttg
aagaatccttttctttgcctctataacataattcttggtgcctatgtccc
cttacactaaggattcacaagaactaaaaaaaaaaaaatactatgtgagt
gaaattacagtgtgtaagaagcatgttcagaccattattataaatgcaaa
accaaaacccagagatagaaaagagatttatcaaaagctgctcaagggtc
cagggcaagagagtatacacaacccacacttcttatttcctaagtgcaga
gacagtcagttcccacaacaaagatttaaattctaatttgagaaacagct
tttgttgtagcttctaaagtcagacagcatactcctcacccaataattca
attgttcactcatccatcaggcacttattgaacactcattatgtgctagg
tataggatcctgtgccaagaacacaaagatgaacaggacttgatctttgc
catcaaataggtcatgtctgttatctgaacataatgactccatccctgtt
acccaaagcgctggattcaaaggaacacaataagctaagttgtattttat
tactgagatataattgttagacaaaaggattgcatacttagcaccttggt
cagcttggcaatagcacgtattatggtgatccatttcttgtataagggtc
ataactgtcccacatttcccaaagttttccatcattatcacatcatcact
gttatttttataatatttttatattgtattacttacccatattctttgac
ttttgtttctccttatgtctgtcttaagactttcacataccatacctagc
ctttctttattcttggggtgttggttggacatattgtcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_94676862_94677999
seq2: B6Ng01-350J09.g_66_1205

seq1  GAATTCTTTTTAAAATTGTAATTAGAATACTTTTAAAAAATCATCTGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTAAAATTGTAATTAGAATACTTTTAAAAAATCATCTGTTA  50

seq1  GCATTTTTCTAACCATAAATTTGGCATCTCCTGACACAAGGAGAATTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTCTAACCATAAATTTGGCATCTCCTGACACAAGGAGAATTACA  100

seq1  ATGGCAGGGAGAAAGGGGCCTGTGCAAACAAAACAAAGACATAAAATGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGGGAGAAAGGGGCCTGTGCAAACAAAACAAAGACATAAAATGTA  150

seq1  ATGAGAAAAAAAGCAGGCAGCTCGTTGTGACTGTAAAGAAAAGGAAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAAAAAAGCAGGCAGCTCGTTGTGACTGTAAAGAAAAGGAAAACT  200

seq1  TTAGGGAGGCCTGATTTATAGGATAATTATTATTGGCTGATTTAGAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAGGCCTGATTTATAGGATAATTATTATTGGCTGATTTAGAAAAC  250

seq1  AGGGACAGAGAGATGAATTTGTTGAAGTGAATATTTTGTAAACTGGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAGAGAGATGAATTTGTTGAAGTGAATATTTTGTAAACTGGTTTG  300

seq1  AAGAATCCTTTTCTTTGCCTCTATAACATAATTCTTGGTGCCTATGTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCCTTTTCTTTGCCTCTATAACATAATTCTTGGTGCCTATGTCCC  350

seq1  CTTACACTAAGGATTCACAAGAACTAAAAAAAAAAAAATACTATGTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACACTAAGGATTCACAAGAACTAAAAAAAAAAAAATACTATGTGAGT  400

seq1  GAAATTACAGTGTGTAAGAAGCATGTTCAGACCATTATTATAAATGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTACAGTGTGTAAGAAGCATGTTCAGACCATTATTATAAATGCAAA  450

seq1  ACCAAAACCCAGAGATAGAAAAGAGATTTATCAAAAGCTGCTCAAGGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAACCCAGAGATAGAAAAGAGATTTATCAAAAGCTGCTCAAGGGTC  500

seq1  CAGGGCAAGAGAGTATACACAACCCACACTTCTTATTTCCTAAGTGCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCAAGAGAGTATACACAACCCACACTTCTTATTTCCTAAGTGCAGA  550

seq1  GACAGTCAGTTCCCACAACAAAGATTTAAATTCTAATTTGAGAAACAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTCAGTTCCCACAACAAAGATTTAAATTCTAATTTGAGAAACAGCT  600

seq1  TTTGTTGTAGCTTCTAAAGTCAGACAGCATACTCCTCACCCAATAATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTAGCTTCTAAAGTCAGACAGCATACTCCTCACCCAATAATTCA  650

seq1  ATTGTTCACTCATCCATCAGGCACTTATTGAACACTCATTATGTGCTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCACTCATCCATCAGGCACTTATTGAACACTCATTATGTGCTAGG  700

seq1  TATAGGATCCTGTGCCAAGAACACAAAGATGAACAGGACTTGATCTTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGATCCTGTGCCAAGAACACAAAGATGAACAGGACTTGATCTTTGC  750

seq1  CATCAAATAGGTCATGTCTGTTATCTGAACATAATGACTCCATCCCTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAATAGGTCATGTCTGTTATCTGAACATAATGACTCCATCCCTGTT  800

seq1  ACCCAAAGCGCTGGATTCAAAGGAACACAATAAGCTAAGTTGTATTTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAAGCGCTGGATTCAAAGGAACACAATAAGCTAAGTTGTATTTTAT  850

seq1  TACTGAGATATAATTGTTAGACAAAAGGATTGCATACTTAGCACCTTGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGATATAATTGTTAGACAAAAGGATTGCATACTTAGCACCTTGGT  900

seq1  CAGCTTGGCAATAGCACGTA-TATGGTGATCCATTTCTGTAATAAGGGTC  949
      |||||||||||||||||||| |||||||||||||||||   |||||||||
seq2  CAGCTTGGCAATAGCACGTATTATGGTGATCCATTTCTTGTATAAGGGTC  950

seq1  ATAACTGTCCCACATTTCCCAAAGTTTTCCCATCATTATCACCATCATCA  999
      |||||||||||||||||||||||||||| |||||||||||| ||||||||
seq2  ATAACTGTCCCACATTTCCCAAAGTTTT-CCATCATTATCA-CATCATCA  998

seq1  CTGTTA-TTTTATAATAATTTTTATATTGTAATTAACTAACCCATA-TCC  1047
      |||||| ||||||||| ||||||||||||||  | ||| ||||||| || 
seq2  CTGTTATTTTTATAAT-ATTTTTATATTGTA--TTACTTACCCATATTCT  1045

seq1  TTGACTGT--GTTCTCCTTATGGCCTGGTCTTAAGACTTTCACATACCCA  1095
      |||||| |   ||||||||||| |   ||||||||||||||||||| |||
seq2  TTGACTTTTGTTTCTCCTTATGTC--TGTCTTAAGACTTTCACATA-CCA  1092

seq1  TA-CTAG-CTTTC-TTATTCT--GGGTGTTTGGTTGACATATTGTCAT  1138
      || |||| ||||| |||||||  ||||||| | | |||||||||||||
seq2  TACCTAGCCTTTCTTTATTCTTGGGGTGTTGGTTGGACATATTGTCAT  1140


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