CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCACCCCCCTTATCTCATTTAGAATGACTACTATCCAAAAAGAGGACAA
GCAAAGGCTGCAAAGGAGCTAGGAGAAGAGGAAGTCTTATATATTGTTGG
TCGATGTAACTCAGTAAAGCAGTGTGCAAAATGCGATGACGTGATCTTCC
TCATCCGAAAACAGCACTGGCATGTGATCCAGCCATCCCACTCCTAGGTG
CATATACAAAGAAAGTGAAGTCAGAATATAGAAGAAATGTATGCATCCCC
ACATTGTTGACTGTAGCCGTGTTACTTAAAGCTAAAACAGTAAACCATTC
TAGGTGTCCAACAATAGATAAACATAAAAACACACAATGGACCATTCTTG
AGACATAAAAATGGCTGAAATATCTTTTGAATTAAATTGCCTTAGTCTAT
GCATTTAATATATGCAAGTAATGACTAAATACCTTGTGCACTTAATATTT
TTCTGAAACATTTAAAGTAAGAAAGCAGAAATTGCGTATATTATAAGTAT
CATAGAATTACCAGGGAGGAGTGCTGTAAGTAGGGAACAAAGAATTACTT
CTCAGTTGACGAAATGTGAGCCAACAGCTACATTCTAATCTTANAGTGTA
ATGTTTGTACTCTCCAGAAAATAGAAGGAGTA

CGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTATCCCATTTTTA
ATAGGTTATTTGGTTCTCTGGAGCCTAACTTCTTGAGTTCTTTGTATATA
TTGGGTATTAGCCCTCTATCAAATGTAGGATTGGTAAAGATCTTTTCCTA
ATCTGTTTGTTGCCTTTTTGTCTTATTGACAGTGTTGCTTGCCTTAAAGA
AGCTTTGCAATTTTATGATCTCCCATGCACATGGATTGGCAGGATTTATA
TAGTTAAAATGGCTAACTTGATGAAAGCAATCTACAGATTCAGTGCAATC
CCCATCAAAATTCCAACTAAATTCTTGATTTAGATAGAGCAATTTCCAAA
TTCATCTGGAATAATAAAAAACTCAGGATAGTGAAAACTATTCTCAACAA
AAGAAGAACTTCTGGTCGAATCATCATCCCTGACCTTCAGCTGTACTACA
GAACAATTGTGATAAAAGCTGCACGGTATTGGTCCAGTGACAGGCAGGTA
GATTAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGG
TCACTTGACCTTTGACAAAGGAGCTAAAACCATTCAGTGGATAAAAGACA
GCATTTTCAACAAATGGTGCTTGCTCAACT

Query= MSMg01no045_n22.b1 MSMg01no045_n22.b1 CHROMAT_FILE:
MSMg01no045_n22.b1 PHD_FILE: MSMg01no045_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:56 2005
         (638 letters)



>mm_chr2_107769123_107770160
          Length = 1038

 Score =  812 bits (420), Expect = 0.0
 Identities = 449/459 (97%)
 Strand = Plus / Minus

                                                                        
Query: 180  atgtgatccagccatcccactcctaggtgcatatacaaagaaagtgaagtcagaatatag 239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 atgtgatccagccatcccactcctaggtgcatatacaaagaaagtgaagtcagaatatag 979

                                                                        
Query: 240  aagaaatgtatgcatccccacattgttgactgtagccgtgttacttaaagctaaaacagt 299
            |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 978  aagaaatgtatgcatccccacattgttgactgtagcagtgttactaaaagctaaaacagt 919

                                                                        
Query: 300  aaaccattctaggtgtccaacaatagataaacataaaaacacacaatggaccattcttga 359
            ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 918  aaaccattctaggtgtccaacaatagataaatataaaaacacacaatggaccgttcttga 859

                                                                        
Query: 360  gacataaaaatggctgaaatatcttttgaattaaattgccttagtctatgcatttaatat 419
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858  gacataaaaatggttgaaatatcttttgaattaaattgccttagtctatgcatttaatat 799

                                                                        
Query: 420  atgcaagtaatgactaaataccttgtgcacttaatatttttctgaaacatttaaagtaag 479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798  atgcaagtaatgactaaataccttgtgcacttaatatttttctgaaacatttaaagtaag 739

                                                                        
Query: 480  aaagcagaaattgcgtatattataagtatcatagaattaccagggaggagtgctgtaagt 539
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738  aaagcagaaattgtgtatattataagtatcatagaattaccagggaggagtgctgtaagt 679

                                                                        
Query: 540  agggaacaaagaattacttctcagttgacgaaatgtgagccaacagctacattctaatct 599
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 678  agggaacaaagaattacttctcagttgatgaaatgtgagccaacagctacattctaatct 619

                                                   
Query: 600  tanagtgtaatgtttgtactctccagaaaatagaaggag 638
            || | ||||||||||| ||||||||||||||||||||||
Sbjct: 618  taaaatgtaatgtttgcactctccagaaaatagaaggag 580


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space:   645584
Effective search space used:   645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)