GCGGCGCTAAACGACTCCTATATCGAGAGGATCCGCGGAATTCAACCTGA
CAACATGTGGATTCCTCGCTGGCCCTCATTGTTCCTCATTGCATTGCATA
TGAAGCAAGTAAAATGAATGAGCTGAGAGCATATATGTTAAAGAATTTAA
AGATTTCAACAAGTATTTTTTTTAAGTCACCTTGAAACTTTTTTTAATCA
CAAGTTGAATTAAAATAGCCTTCAATTTGGGTATATGAAATATCTGCATC
CAGCCTGATGATTTTTAAAAATGTGTTTTCAGCAAATAACTACTGTTGTG
GTTTCTGTGAATTTGAGATTGAATTCACCCCTCCCCCTAGGAAAGGAGAG
GGAAGCCTGGTGTTGATAGGGACACAGTAATCATTGTTTCTAAGTGCTGG
CTTCTTCAGTTGATAGTTAATATTTAATGACAGTTTGCTATATAGCAATG
GCAGTTTTAAGTATCTCATACAGAGTTGTTGGAAGAACAGTAAGCTATAA
AGATATGTACTTACAAAAGACAATAGTTACAGCGAAACCTAGAAGTTCAT
TTGTCCCCAGGAATAAAACAGAAGTAGTGGTGTGGCAAGGGAAGTTGGTG
AAAAATGTATTAACTCCATCATACATGTAACACTTGTCAACCAATGGTCC
AGTTTTTTTCCCTTTCCTCTCCTTCCCTTCCTCCCTCTT

CAATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTAATATTGAATGTATTTCATAGCCAT
TTGTGAATCTCAGTGCCATTAAAACTGGGAACCTTATTTCACCTTTATAT
TTGTACCTTCTGTGAAAGGTAACACTGCTATTCACTCCAAAGTCCTAAGA
CTGTCACATTCTACAAGTTAGTGCCTATACTAAATAATATAGAGCACACC
TGTAACACATCTTAAAAATTAAGTGCTAAAGAAATTTTTTTATTCCGTTA
ATGCATCTTTCTTATGTTCATGCTCTTTTATTCAAAATTTAGATTTAAAA
TATTAAAGATACCATGTGATAATTATCTAGCTTTTTTACTTAATGCAATG
TTCATCAGATCCATTTATTTTCAAGAAAACAACATGATTTTGCTATTGTT
TAATTGATGTTTAAACATCGCCTGGTCAGTGTTACTATAAGAATTAGCCA
GTATGGTCAGGAATACTGATGTTAAGTGTAGATTACATAATTCTCTTGTT
CCTCTATACCATGGCTGAGTGGTAGTTTCTAGTTCTGGTTTCCTTCAAGG
TTATTATATTATTGCAATTAATGAGGTTTCTGATGAATCAGCCATAAGAA
ATGATTCATGAATTATTCTTTGTTCAATCTAATTTATAACCTATAGC

Query= MSMg01no046_d18.b1 MSMg01no046_d18.b1 CHROMAT_FILE:
MSMg01no046_d18.b1 PHD_FILE: MSMg01no046_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:21 2005
         (658 letters)



>mm_chr2_97338704_97339761
          Length = 1058

 Score = 1237 bits (640), Expect = 0.0
 Identities = 649/652 (99%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcaacctgacaacatgtggattcctcgctggccctcattgttcctcattgcattgc 66
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaacctgacaatatgtggattcctcgctggccctcattgttcctcattgcattgc 266

                                                                       
Query: 67  atatgaagcaagtaaaatgaatgagctgagagcatatatgttaaagaatttaaagatttc 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atatgaagcaagtaaaatgaatgagctgagagcatatatgttaaagaatttaaagatttc 326

                                                                       
Query: 127 aacaagtattttttttaagtcaccttgaaactttttttaatcacaagttgaattaaaata 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aacaagtattttttttaagtcaccttgaaactttttttaatcacaagttgaattaaaata 386

                                                                       
Query: 187 gccttcaatttgggtatatgaaatatctgcatccagcctgatgatttttaaaaatgtgtt 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gccttcaatttgggtatatgaaatatctgcatccagcctgatgatttttaaaaatgtgtt 446

                                                                       
Query: 247 ttcagcaaataactactgttgtggtttctgtgaatttgagattgaattcacccctccccc 306
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 447 ttcagcaaataactactgttgtggtttctgtgaacttgagattgaattcacccctccccc 506

                                                                       
Query: 307 taggaaaggagagggaagcctggtgttgatagggacacagtaatcattgtttctaagtgc 366
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 507 taggaaaggagagggaagcctggtgttgctagggacacagtaatcattgtttctaagtgc 566

                                                                       
Query: 367 tggcttcttcagttgatagttaatatttaatgacagtttgctatatagcaatggcagttt 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tggcttcttcagttgatagttaatatttaatgacagtttgctatatagcaatggcagttt 626

                                                                       
Query: 427 taagtatctcatacagagttgttggaagaacagtaagctataaagatatgtacttacaaa 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 taagtatctcatacagagttgttggaagaacagtaagctataaagatatgtacttacaaa 686

                                                                       
Query: 487 agacaatagttacagcgaaacctagaagttcatttgtccccaggaataaaacagaagtag 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 agacaatagttacagcgaaacctagaagttcatttgtccccaggaataaaacagaagtag 746

                                                                       
Query: 547 tggtgtggcaagggaagttggtgaaaaatgtattaactccatcatacatgtaacacttgt 606
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tggtgtggcaagggaagttggtgaaaaatgtattaactccatcatacatgtaacacttgt 806

                                                               
Query: 607 caaccaatggtccagtttttttccctttcctctccttcccttcctccctctt 658
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 caaccaatggtccagtttttttccctttcctctccttcccttcctccctctt 858


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space:   679104
Effective search space used:   679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no046_d18.g1 MSMg01no046_d18.g1 CHROMAT_FILE:
MSMg01no046_d18.g1 PHD_FILE: MSMg01no046_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:21 2005
         (570 letters)



>mm_chr2_97463952_97464921
          Length = 970

 Score = 1036 bits (536), Expect = 0.0
 Identities = 560/568 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttaatattgaatgtatttcatagccatttgtgaatctcagtgccattaaaactgggaacc 60
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 768 ttaatattgaatgtatttcatagacatttgtgaatctcagtgccattaaaactgggaacc 709

                                                                       
Query: 61  ttatttcacctttatatttgtaccttctgtgaaaggtaacactgctattcactccaaagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 ttatttcacctttatatttgtaccttctgtgaaaggtaacactgctattcactccaaagt 649

                                                                       
Query: 121 cctaagactgtcacattctacaagttagtgcctatactaaataatatagagcacacctgt 180
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 cctaagactgtcacatcctacaagttagtgcctatactaaataatatagagcacacctgt 589

                                                                       
Query: 181 aacacatcttaaaaattaagtgctaaagaaatttttttattccgttaatgcatctttctt 240
           ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 588 aacacatcttaaaaattaagtgctaaagaaaatgttttattccgttaatgcatctttctt 529

                                                                       
Query: 241 atgttcatgctcttttattcaaaatttagatttaaaatattaaagataccatgtgataat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 atgttcatgctcttttattcaaaatttagatttaaaatattaaagataccatgtgataat 469

                                                                       
Query: 301 tatctagcttttttacttaatgcaatgttcatcagatccatttattttcaagaaaacaac 360
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 468 tatctagcttttttacttaatgcagtgttcatcagatccatttattttcaagaaaacaac 409

                                                                       
Query: 361 atgattttgctattgtttaattgatgtttaaacatcgcctggtcagtgttactataagaa 420
           ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 408 atgattttgctattgtttaattgatgtttaaccatctcctggtcagtgttactataagaa 349

                                                                       
Query: 421 ttagccagtatggtcaggaatactgatgttaagtgtagattacataattctcttgttcct 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 348 ttagccagtatggtcaggaatactgatgttaagtgtagattacataattctcttgtccct 289

                                                                       
Query: 481 ctataccatggctgagtggtagtttctagttctggtttccttcaaggttattatattatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ctataccatggctgagtggtagtttctagttctggtttccttcaaggttattatattatt 229

                                       
Query: 541 gcaattaatgaggtttctgatgaatcag 568
           ||||||||||||||||||||||||||||
Sbjct: 228 gcaattaatgaggtttctgatgaatcag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space:   537600
Effective search space used:   537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)