Query= MSMg01no046_k05.b1 MSMg01no046_k05.b1 CHROMAT_FILE:
MSMg01no046_k05.b1 PHD_FILE: MSMg01no046_k05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:50 2005
(395 letters)
>mm_chr2_100701105_100701899
Length = 795
Score = 748 bits (387), Expect = 0.0
Identities = 393/395 (99%)
Strand = Plus / Minus
Query: 1 attgaggtaaatagcaattttaaaaagaataatcaaaaggagcttcattgaccagtataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 attgaggtaaatagcaattttaaaaagaataatcaaaaggagcttcattgaccagtataa 375
Query: 61 ggcttataaaaatcatcttgtaaaaaatatttgttttttcaggatgtaacacttaactca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ggcttataaaaatcatcttgtaaaaaatatttgttttttcaggatgtaacacttaactca 315
Query: 121 gtgcacacatattaaattgtccttaatccaagctctgcctttacagaaacattgcatata 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gtgcatacatattaaattgtccttaatccaagctctgcctttacagaaacattgcatata 255
Query: 181 agtgtgtttatagtgattgttattttgtaccacagatactattttctagggccttggttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agtgtgtttatagtgattgttattttgtaccacagatactattttctagggccttggttc 195
Query: 241 tcaaccttactaatgctgcaaccctttaatacagttcctcatgctgtggtgatctccaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tcaaccttactaatgctgcaaccctttaatacagttcctcatgctgtggtgatctccaac 135
Query: 301 cataaaattatttccatgctactttataactataattttgctacttacaaattgcaatat 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 134 cataaaattatttccatgctactttataactataatttttctacttacaaattgcaatat 75
Query: 361 aaatatttgatatgtagggtatttgatatacagtc 395
|||||||||||||||||||||||||||||||||||
Sbjct: 74 aaatatttgatatgtagggtatttgatatacagtc 40
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_k05.g1 MSMg01no046_k05.g1 CHROMAT_FILE:
MSMg01no046_k05.g1 PHD_FILE: MSMg01no046_k05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:50 2005
(404 letters)
>mm_chr2_100379648_100380451
Length = 804
Score = 596 bits (308), Expect = e-174
Identities = 329/338 (97%), Gaps = 4/338 (1%)
Strand = Plus / Plus
Query: 1 taatccaaataaactctttcttccctaggccacatttttgtcaggcatttttttt----a 56
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 197 taatccaaataaactctttcttccctaggccacatttttgtcaggcattttttttttaaa 256
Query: 57 tcacaacaacagtaataaaactgaaagaaattataaacttctgtattagagtagaagtct 116
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 257 tcacaacaacagtaataaaactgaaagaaattataaacttccgtattagagtagaagtct 316
Query: 117 aaactgagttgccattagaatgcttgtgtttgtatttggttgagtaaattatgtatcaaa 176
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 317 aaactgagttgccattagaatgcttgtgtttgtatttggttaagttaattatgtatcaaa 376
Query: 177 ttaaaacttacatggaagaataatataataatagtttattgattaaataaaagtttgcta 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttaaaacttacatggaagaataatataataatagtttattgattaaataaaagtttgcta 436
Query: 237 attacgaaatgcatttatattaccagctcacataactttctattatttgttgcaaataat 296
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 437 attacgaaatgcagttatattaccagctcacataactttctattatttgtttcaaataat 496
Query: 297 aataaattttatagaagttaatagttattctgattttt 334
||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aataaattttatagaagttaatagttattctgattttt 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
