Query= MSMg01no048_b12.b1 MSMg01no048_b12.b1 CHROMAT_FILE:
MSMg01no048_b12.b1 PHD_FILE: MSMg01no048_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:38 2005
(756 letters)
>mm_chr2_94313753_94314909
Length = 1157
Score = 1373 bits (710), Expect = 0.0
Identities = 731/738 (99%), Gaps = 1/738 (0%)
Strand = Plus / Plus
Query: 16 gaattctgtataaagactcaaacc-ctaaacattgattttcactggtaaataatgtcttt 74
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 216 gaattctgtataaagactcaaaccacgaaacattgattttcactggtaaataatgtcttt 275
Query: 75 cataccatgtttccttagcccttcccagcaagaggaaccgacctttgaactccttgagtt 134
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 catagcaggtttccttagcccttcccagcaagaggaaccgacctttgaactccttgagtt 335
Query: 135 cctcctgtccagccaggcctaagattccctcagatctttccctttctacctgccacctga 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 cctcctgtccagccaggcctaagattccctcagatctttccctttctacctgccacctga 395
Query: 195 agcagccgttagttacttatgcttctgttcctctgttcccatcgacaactcttcaagccc 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 agcagccgttagttacttatgcttctgttcctctgttcccatcgacaactcttcaagccc 455
Query: 255 caggcacgttcccgggaagacgccatcattgcttctgctagacaggtctcagcttctagc 314
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 caggcaagttcccgggaagacgccatcattgcttctgctagacaggtctcagcttctagc 515
Query: 315 tcattcaagctgatgccactcaaattctgattcattacaaaatttgcatttttgagccta 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tcattcaagctgatgccactcaaattctgattcattacaaaatttgcatttttgagccta 575
Query: 375 cactcagattaaggcatgtgacactcttgttcatctcagatgccgagagaggggtagggc 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cactcagattaaggcatgtgacactcttgttcatctcagatgccgagagaggggtagggc 635
Query: 435 tgtgtcatctatcctggtttatttataatggtgctagggaagacttcattaattaagctt 494
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tgtgtcatttatcctggtttatttataatggtgctagggaagacttcattaattaagctt 695
Query: 495 ctaaaacagccccactcccttccccttcccaggagcccaaccatcgattagaactgggta 554
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 696 ctaaaacagccccactcccttccccttcccaggagcccaaccattgattagaactgggta 755
Query: 555 ttttgaaatcaacacttgatagcaacctgtggtagacactggattcataaaaagaaaatt 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ttttgaaatcaacacttgatagcaacctgtggtagacactggattcataaaaagaaaatt 815
Query: 615 tgaggggagggctgtcaaattttgtaggaaaagctttgtaaatgaaaacacccacttacc 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 tgaggggagggctgtcaaattttgtaggaaaagctttgtaaatgaaaacacccacttacc 875
Query: 675 aattacaacaattctcgttatacatccttctctggtcagtcctgtatcttttatctttga 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 aattacaacaattctcgttatacatccttctctggtcagtcctgtatcttttatctttga 935
Query: 735 aggtgagtgttaggcttt 752
||||||||||||||||||
Sbjct: 936 aggtgagtgttaggcttt 953
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 756
Length of database: 1157
Length adjustment: 10
Effective length of query: 746
Effective length of database: 1147
Effective search space: 855662
Effective search space used: 855662
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no048_b12.g1 MSMg01no048_b12.g1 CHROMAT_FILE:
MSMg01no048_b12.g1 PHD_FILE: MSMg01no048_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:39 2005
(692 letters)
>mm_chr2_94479068_94480159
Length = 1092
Score = 542 bits (280), Expect = e-158
Identities = 328/344 (95%), Gaps = 2/344 (0%)
Strand = Plus / Minus
Query: 350 cagctagagacttgagctctgggggtactggttacttcatattgttgttccacctatagg 409
||||||||||||||| ||||||| ||||| | | |||||||||||||||||||||||||
Sbjct: 1092 cagctagagacttgaattctggggatactgatgagttcatattgttgttccacctatagg 1033
Query: 410 gttgcaaaccccttcagctccttgggtacattctctagctcaaatgtgcagtttgggagt 469
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1032 gttgcaaaccccttcaggtccttgggtacgttctctagctcaaatgtgcagtttgggagt 973
Query: 470 atgtttaaagttgtagacagaatgaacggagatgtggctaaatactcagcacaattaa-a 528
||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| |
Sbjct: 972 gtgtttaaagttgtagacaggatgaagggagatgtggctaaatactcagcacaa-taata 914
Query: 529 gataaagcaaacactgcactgaacaggtagaagaaagtctgcctaagcactaagcatggc 588
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 gataaagcaaacaatgcactgaacaggtagaagaaagtctgcctaagcactaagcatggc 854
Query: 589 tggatgggtaggagacaccctgatcttcaaaggctctggggtacaaaatgtaaaaagcat 648
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 tggatgggtaggagacaccctgatcttcaaaggctctggggtacaaaatgtaaaaagcac 794
Query: 649 gtgaaagactttcctccaaaaacccataaaatagtagagttgaa 692
||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 793 gtgaaagactttcctccaaaaacccataaaatagtagagctgaa 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1092
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1082
Effective search space: 737924
Effective search space used: 737924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
