Query= MSMg01no050_a12.b1 MSMg01no050_a12.b1 CHROMAT_FILE:
MSMg01no050_a12.b1 PHD_FILE: MSMg01no050_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:47:47 2005
(321 letters)
>mm_chr2_56522027_56522747
Length = 721
Score = 574 bits (297), Expect = e-168
Identities = 315/321 (98%)
Strand = Plus / Plus
Query: 1 aaggcagagtattgagaaattagatgaatatcctaaaggacttagaagaagccaaaaata 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 aaggcagagtattgagaaattagatgaatatgagaaaggacttagaagaagccaaaaata 260
Query: 61 atagagtaaaacaaaacaaaacacaaacaacaaaaagcaatgaaaagagtgtgaggtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagagtaaaacaaaacaaaacacaaacaacaaaaagcaatgaaaagagtgtgaggtttg 320
Query: 121 atctgattaaatagttcctggcagtgacagagacattgagagaaactgaatttaaattga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctgattaaatagttcctggcagtgacagagacattgagagaaactgaatttaaattga 380
Query: 181 tgataagacctgaagtagaagtgcacaagaatttttacaattttaaaattaagcttataa 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgataagacctgaagtagaaatgcacaagaatttttacaattttaaaattaagcttataa 440
Query: 241 acagagcctctgggacacctaataacctattgtttctattgcatcttccttcccttcact 300
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 acagagcctctgggacagctaataagctattgtttctattgcatcttccttcccttcact 500
Query: 301 gaaggtcaaggcatcgccaac 321
|||||||||||||||||||||
Sbjct: 501 gaaggtcaaggcatcgccaac 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no050_a12.g1 MSMg01no050_a12.g1 CHROMAT_FILE:
MSMg01no050_a12.g1 PHD_FILE: MSMg01no050_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:47:47 2005
(372 letters)
>mm_chr2_56700539_56701309
Length = 771
Score = 611 bits (316), Expect = e-179
Identities = 358/374 (95%), Gaps = 5/374 (1%)
Strand = Plus / Minus
Query: 1 actgtacctgttttgataacacttcgtccggc--cctctctattttttttttttcctgtg 58
|||||||||||||||||||||||| ||||||| ||| | ||||||||||||||||||
Sbjct: 571 actgtacctgttttgataacactttgtccggcttcct---ttttttttttttttcctgtg 515
Query: 59 ctatttctcactcttacatttctcattctatgcaattactaaattaactcctggccttta 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ctatttctcactcttacatttctcattctatgcaattactaaattaactcctggccttta 455
Query: 119 aatgcttgtctcagggccttcgctggaaaacatctaaggtaagtgccttgaacttaggta 178
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 454 aatgcttgtctcagggccttcgctgggaaacatctaaggtaagagccttgaacttaggta 395
Query: 179 aaatgaggactgtttgactcgtcaagtcaatttgaggatttgaaaagatggtttcaataa 238
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 394 aaatgaggactgtttgactcgtcgggtcaatttgaggatttgaagagatggtttcaatag 335
Query: 239 aatgtgtggaataaaagttttattaaattaccttcaatcataatatggaataaagagatt 298
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 334 aatgtgtgggataaaagttttattagattaccttcaatcataatatggaataaagagatt 275
Query: 299 ttttttgatgtgacaaaatttctagcatttttgtatattgagaaaatgaaacgaagagag 358
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ttttttgatgtgacagaatttctagcatttttgtatattgagaaaatgaaacgaagagag 215
Query: 359 gaaattgtggtcta 372
||||||||||||||
Sbjct: 214 gaaattgtggtcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 771
Length adjustment: 9
Effective length of query: 363
Effective length of database: 762
Effective search space: 276606
Effective search space used: 276606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
