Query= MSMg01no051_j15.b1 MSMg01no051_j15.b1 CHROMAT_FILE:
MSMg01no051_j15.b1 PHD_FILE: MSMg01no051_j15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:51:31 2005
(614 letters)
>mm_chr2_139953609_139954622
Length = 1014
Score = 1083 bits (560), Expect = 0.0
Identities = 590/600 (98%), Gaps = 2/600 (0%)
Strand = Plus / Plus
Query: 16 gaattccactggtcaggagcaacaattagggaaacttcataaaatacttctctttac-at 74
|||||||||||||||||||| | || |||||||||||||||||||||||||||||| ||
Sbjct: 216 gaattccactggtcaggagcgagaagcagggaaacttcataaaatacttctctttacaat 275
Query: 75 gccagcttggagttgctcaaagaccaagccattggaagcttacgtgtgtgtagcataaag 134
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 276 gccagcttggagttgctcaaagagcaagccattggaagcttacgtgtgtgtagcataaag 335
Query: 135 atgaggggaagacaaagcacacaagagcaactggaaagattcacagtggtttctgcagtg 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atgaggggaagacaaagcacacaagagcaactggaaagattcacagtggtttctgcagtg 395
Query: 195 gcttgcccaagcatggcctcgaccttaccaaacatagtcctatacatccaaaggtaagaa 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gcttgcccaagcatggcctcgaccttaccaaacatagtcctatacatccaaaggtaagaa 455
Query: 255 tgaaaacatctgaaagcacaggaggtataaaaaacatggaaccaaaactccttggaaata 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tgaaaacatctgaaagcacaggaggtataaaaaacatggaaccaaaactccttggaaata 515
Query: 315 ggaagaaagacatcttagtgtaagaattcaaagacaaagagagctctgagaaaagctgtt 374
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 516 ggaagaaagacatcttagtgtaagaattcaaagaaaaagagagctctgagaaaagctgtt 575
Query: 375 ttttttttaaactacatttaacaaggataaatgcacaaaggaagcatagatgcttctgca 434
||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 576 ttttttt-aaactacatttaacaaggataaatgcaaaaaggaagcatagatgcttctgca 634
Query: 435 tatttgaacagaaaaggctattacactgtaattccatgtatacatttaaaagaatatgat 494
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 635 tatttgaacagaaaaggctattatactgtaattccatgtatacatttaaaagaatatgat 694
Query: 495 gccatgacaaatccagttcacttttaattgttcaatgcttttgcagaaagagacctgaag 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gccatgacaaatccagttcacttttaattgttcaatgcttttgcagaaagagacctgaag 754
Query: 555 aagtattataatgcagagactaaataacattcattctaaataacagcattcttttagagt 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 aagtattataatgcagagactaaataacattcattctaaataacagcattcttttagagt 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no051_j15.g1 MSMg01no051_j15.g1 CHROMAT_FILE:
MSMg01no051_j15.g1 PHD_FILE: MSMg01no051_j15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:51:32 2005
(290 letters)
>mm_chr2_139982603_139983292
Length = 690
Score = 530 bits (274), Expect = e-155
Identities = 286/290 (98%)
Strand = Plus / Minus
Query: 1 tctcaaatttaatgaaatttcagatttatactttttaaatttcagagatgttgtgccaac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tctcaaatttaatgaaatttcagatttatactttttaaatttcagagatgttgtgccaag 431
Query: 61 gttgtttctagccattgcatttgtatagaaacttatatagtatataaactattactaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gttgtttctagccattgcatttgtatagaaacttatatagtatataaactattactaatt 371
Query: 121 agaaattttaaaccctggtaatcacttctttttatgtttaagtaaatttttctttttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agaaattttaaaccctggtaatcacttctttttatgtttaagtaaatttttctttttctt 311
Query: 181 tttttagatttataccagatgatattacctttgatgatgagccccaggatgtggccttag 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 310 tttttagatttataccagatgatattacctttgatgatgagcccaaggatgtggccttag 251
Query: 241 aagttgattcaacggcatataagccaaagcatttcacatctgctgcaatg 290
||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 250 aagttgatttaacggcatataagccaaagtatttcacatctgctgcaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
