BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-051K16.T7 (MSMg01no051_k16.b1) | MSMg01-051K16.TJ (MSMg01no051_k16.g1) |
ACC | AG280359 | AG280360 |
length | 1,402 | 1,342 |
length of high quality (start - end) | 144 (132 - 275) | 321 (76 - 396) |
definition | CHROMAT_FILE: MSMg01no051_k16.b1 PHD_FILE: MSMg01no051_k16.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 16:51:40 2005 | CHROMAT_FILE: MSMg01no051_k16.g1 PHD_FILE: MSMg01no051_k16.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 16:51:40 2005 |
singlet/doublet | --- | singlet |
---|
BLAST hit | no hit data | unique |
---|
sequence | NNCCTCTATGGGCGCTATAGACTCCTATAGGGAGAGGATCCGCGGAATTC
TTTGTTTAGCTCTGCACCTTTTATTTTATTGGGTTATTTGAATTTCTGGA
TTTCAGCCCTTTAAGCTCTTTGTACCCCCTGGATATTAGTCCCCTATCAG
ATTTAGGATTGGTAAAAATCCTTTCCCAATCTGTTGGTGGCCTTTTTGTC
TTATTGACAATATCTTTTATGTTACAGAAGCTTTGCAATTTTATGAGGTT
TCATTTGTCGCTTCTTGATCTTACAGCACAACCCAAGTCATTGCTGCTCT
TTTTCGGAATTTTTCCTCTGTGTCTTATAACTTTGATGCTCTTTCCCTTT
TTCTCCTCCATAAGTCTCTGCGTTTCTGTTTTTACGCGGAGTTCTTTTTT
TTTTTTAATTTCTCTTTTTTCTTTTTTTGATTTCTTTTTTACTCCCTTTT
TTTTCCCCCTCCCCTTATTTTTTTTTTTCTTTTTCTTAATTTAAATTTTT
TTCTTTTCTCTTTTTTTTTTTGCTTTCTTCTTTCTTTTTTTTTCTTTTTT
CTCTTTTTTTTTCATATTTTTTTTTTTTTTTATTTTTCTCTTTTTATTTT
TTTCCTATTTCTTTTTTTCCCTATCTTTTTTTTTTTATCCTTCTTCTTTT
CTTTTTTTTTTTTTTTTTTTCCTTCTTTTTTTTTTTTCTTTTTTTTTTTC
TTATTCTTATTTTTCTTTTTTTCTTTTCTTTTTCTTTTTCCTCCTTTTCT
TTTTTTTTTTTTCCCTTTTTCTTTTTTTTTTTTTTTTTTATTTTTTTAGT
TTTCTCTTTTTTTTTTCTTTTTTTTTTTTTTTTTCTTTCTTTTCTTTTCT
TTTTTTTTCTTTTTTTTTTTTTTCTTTTTTTTTCTTATTTTTTTTTTTTT
CTTTTCCCTTTTTTTCTTTTTTTTTTCCATTTTTCTTTTTTTTTTTTTTC
TTTTTCTTTCCTGTCCTTTTTTCTTTTCTCTCTCCTTCTTTTCTTTTGTC
TTCTTTTTTTCTATCTTTCTTTTTTTCTTTTTTCTTTTTTCCTTTTTTTT
TTTTTTTTTTTCCCCCTTGTTATATTTTTATTTTTTATTTTTTTTTATAT
TTTTTATTTTTCTTCTTTTTTAGTTTTTGATTTTTATTATTTTATTTTTT
CTCTTAGTATTCTCTCTCTCTTCACTTTCTTTTTTTATCTTTCATTTTTT
CCCTATTTTCTTTCTATTATTATGTTCTATTCTTTTCCTGTCTCTTCTTC
TTTTATTCCCTCTTCTTATCTTTTCTCTTTCTTTTTCTTNTATTTTTTTC
TTCTTTTTTCATGTATCTCTCTTATTCTATTTTATATTTTATCTTATATT
TCTTTTACTTTTTCTTTTTTCTTTTCCCCCTATTTTTCTTTTTTTTTTTT
TG
| NNNCCGAGCTAGGTAGGCTGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCCTTTTTGAGAGTATTGGGAACTAGAAAAGCCTT
TTACAACTCTGACAATTTGGAATAAGACCCACATTTTCAAACTCCTACAT
CAAACAGTATTTAGACATGTAATGTCCTTTAGAAATGGCCATGATTCTGG
ATTATTCAGCTTCCATTAGTCAAAAGCAAATACCAAAGAAGAATTCAGCC
AAGAGACCATCAACAGTTCTGCTAATTAGAATATTGGTTGCCTCTTCATG
GAGGGAGCTCTAAGAAGCACACTATGTCTGCTACTTCCATCAAACTACAT
GTGCACATCTTCTTTGCGTATCAGTTCTGCTTAGGAGCATCTATCATATT
TTTTTATGCTGTATGTCTAACTTTTGTTTGTTGTTGCAACTATTCCCCCC
TTTCTATTTCCCCCCCCCCTTTGCATATTCGTTCTTTTATTCACAATGCA
TTTTTCTTTATTATTTTCTTTTATTTATTATTCAATTTTCTTCTTTTTCT
TTCTTTTTTTTTTTCAATTTCTTTTTTATTTCCTTCATTTCGTCTTTTCT
CTTCTTTCTTTATTTTTTATCTCTTTCTTTTCTTCTTTATTTATTTTTTT
CTTTTTTTTCATTATTTTATTATTTTTTTTTTATTCTTCCTTTTTTTTTT
TTCTCTTTTTTTTATTTTTCTTTTTTTTCCCCTCTACTTTTTTTTTTTTT
TTCTCTCTCTATCTTTCTTTTTCTTTTCTTTTTTCTTTATTCTTAATTTT
CTTTTTCCTTTTTTTTCTACTTTCTTTTTTTTTTTTCCTTTTTTTTCTTT
TTTTCTTTTATTTTTATCTTCCCCTTTCTTTTTTTTTTTTTACTTTTTCT
CTTCTTTTCTTCTTTTCTCTCTTTTCTTTCCCTTTTTATTTTCTTTTTCT
CCTTCTTATTTCTTCTTTTTTTATTTCTCTTTTCTTTTATATTTTTATTT
TTCCCTTCCCTTTTTTTTTTTTTTTTTACTTTATTTTCTTCTTTTGTTTC
TTCTTTTCTTTCTTCCTTCCTCTCTTTACCCTCCTTTTTTTCTTTTTTTT
TTTTTTTCTATCTTTTCTTTATTTCTTTTTTTTTTCGTTATTATTATTCT
TCTTATCTTTTCTTTTTATCTTTTTATATATATTTCTATTTTTTTTTTCC
TTTTTTTTTTTTTTCTTTTTTCTTTCCTCTCTTCTATTATTTTTACTCTT
CTTTCCTCTCTTTCTTTTCCTATTCTTTTCTTTTTCATCAATCTTCCAAC
CTTTTTTCCTTTATTTTTATATACATATATTTTCTTTCTCTT
|
quality values | Open.Hide. 0 0 3 6 6 6 7 8 15 12 9 16 14 14 11 15 10 10 8 8 15 16 9 8 8 14 19 24 28 28 37 47 37 43 43 42 42 48 43 42 39 36 43 43 43 48 48 53 57 57
50 38 38 36 36 31 31 33 33 33 37 22 19 11 8 8 8 14 15 12 14 10 10 12 13 16 15 16 16 18 20 28 32 39 47 47 53 53 59 57 57 57 57 57 57 53 53 50 59 59
50 42 47 39 25 25 9 11 12 10 13 9 9 9 10 13 10 15 15 17 19 10 10 8 8 10 9 11 9 9 9 21 21 33 37 37 33 33 33 33 37 39 39 39 47 47 39 39 36 43
43 43 43 37 30 30 32 39 43 43 28 28 28 40 37 43 42 42 39 41 41 47 46 46 43 43 37 43 43 37 37 40 30 44 28 28 28 32 32 18 18 18 32 34 59 44 42 33 33 44
44 57 57 57 57 44 42 29 29 37 44 50 57 54 54 57 57 57 57 44 37 36 32 18 14 14 27 32 27 29 28 33 44 44 28 23 36 36 42 32 44 37 37 36 44 36 43 43 43 42
39 35 35 37 42 24 16 10 10 10 10 10 25 25 47 47 39 43 35 35 32 28 23 18 18 15 16 11 12 12 12 12 12 12 10 8 8 8 8 8 10 21 11 11 12 21 19 22 32 34
41 23 19 8 8 8 11 8 19 24 36 36 47 47 35 35 35 31 28 22 11 11 9 9 9 9 9 10 12 12 13 28 21 21 24 13 13 11 11 11 13 10 17 22 21 22 11 11 13 23
25 21 18 13 11 11 15 11 11 12 16 15 11 12 10 19 12 10 9 9 10 10 13 15 11 10 10 8 10 11 10 10 11 13 15 10 8 8 8 9 11 16 9 9 9 12 12 17 17 24
25 29 24 19 12 9 9 9 8 12 8 10 8 8 8 8 10 8 8 10 19 12 8 10 10 13 13 8 8 7 6 10 8 8 8 8 8 8 8 8 8 8 7 6 8 8 10 10 12 15
26 22 17 10 8 8 8 15 7 9 9 13 7 8 11 8 10 10 10 10 13 11 11 11 11 11 11 12 13 12 10 9 9 9 8 8 8 8 8 6 6 6 6 8 8 10 10 9 12 10
10 8 8 11 8 11 8 8 8 8 8 8 8 17 17 11 11 10 10 10 8 8 8 13 17 19 13 8 8 6 6 8 8 7 7 8 10 12 9 10 12 14 12 12 12 18 13 10 10 8
8 8 7 7 12 10 16 16 12 12 8 6 8 6 6 10 10 10 10 15 10 13 12 10 10 9 8 8 8 10 8 8 8 8 8 8 11 12 8 8 8 12 10 8 8 6 6 12 10 12
11 10 8 8 8 6 6 8 10 8 8 8 8 8 9 10 12 8 7 7 7 6 6 6 13 8 8 9 11 14 11 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 10 9 9 10
9 21 13 20 22 24 17 17 9 9 9 14 21 26 20 17 21 17 17 10 10 9 12 10 8 8 8 9 13 15 15 13 10 15 10 12 8 8 8 8 9 12 16 19 19 21 16 12 15 11
8 8 8 8 8 8 8 8 8 8 10 10 16 8 8 8 10 11 12 11 10 8 8 8 8 9 8 8 8 10 10 10 10 15 15 12 12 12 10 10 9 9 9 9 9 9 8 15 6 7
8 22 23 25 10 10 10 22 18 17 11 10 8 9 8 8 12 25 19 14 12 10 10 10 10 13 9 10 12 15 14 17 15 15 12 13 12 10 10 10 10 15 12 14 12 10 8 6 6 6
10 10 10 8 8 8 8 8 10 13 16 22 19 13 8 8 8 10 17 24 28 22 14 14 12 12 10 10 11 13 9 9 9 9 10 11 8 8 6 6 8 8 10 8 13 15 13 8 8 7
8 12 13 21 15 22 10 10 8 8 12 13 16 14 14 12 11 9 9 12 14 10 10 11 9 11 12 12 12 19 17 19 10 8 10 8 8 8 10 13 26 22 22 17 13 9 9 9 9 10
10 14 15 9 8 8 9 10 12 17 19 28 18 17 10 10 11 21 25 33 19 18 15 9 11 8 7 7 7 11 17 18 15 16 9 9 10 8 10 21 22 21 18 13 13 13 18 10 8 7
7 10 15 10 10 10 8 10 9 8 8 8 8 8 8 8 8 10 10 11 12 11 11 9 10 10 10 9 9 9 9 9 9 11 10 14 10 18 12 15 15 11 11 10 15 14 8 8 8 8
8 8 9 9 10 10 12 12 11 18 10 8 8 8 8 8 13 8 8 8 8 9 9 9 8 8 9 9 10 10 12 8 8 8 8 11 13 20 20 11 13 8 8 8 13 22 36 41 47 47
48 48 41 42 28 30 23 20 10 14 9 9 9 9 9 6 8 9 9 9 10 13 7 7 8 10 17 10 8 6 7 14 10 11 10 10 7 9 12 12 19 16 16 8 8 6 6 6 8 8
11 10 11 12 11 9 9 10 8 10 7 6 8 6 8 8 10 9 8 11 8 8 9 9 14 14 12 8 8 6 6 10 13 13 10 8 8 8 8 10 15 11 11 9 9 11 11 11 10 16
16 10 10 8 8 8 8 7 7 8 8 6 6 8 8 6 6 9 8 12 12 10 8 6 6 8 10 13 15 18 13 13 22 19 19 8 8 8 8 10 7 8 8 7 9 10 11 9 12 8
6 7 6 6 6 8 12 15 15 9 9 10 6 7 8 11 11 9 7 11 6 6 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 7 10 11 10 12 12
12 16 15 12 8 6 6 6 6 6 6 8 10 9 8 8 10 10 9 9 10 8 8 8 6 10 7 7 8 8 6 6 7 7 10 8 8 8 3 0 3 10 9 18 17 16 13 11 10 10
9 10 10 10 11 11 17 18 11 9 9 9 9 9 8 8 7 6 10 10 8 8 6 6 8 8 8 9 9 9 10 7 8 6 6 6 6 8 8 9 8 9 10 8 8 8 8 8 8 10
8 8 10 10 10 6 6 8 10 17 12 12 6 6 6 13 10 15 18 19 19 14 15 12 8 8 9 11 7 8 6 6 7 7 9 18 12 9 9 9 9 9 22 9 9 9 9 9 8 11
9 9 | Open.Hide. 0 0 0 3 6 6 6 7 8 8 8 6 6 6 6 7 7 10 6 6 6 7 11 17 15 8 8 6 6 8 15 13 15 19 8 9 15 25 21 33 22 22 15 19 8 8 8 26 23 37
34 35 36 50 57 50 50 44 43 39 39 36 32 21 13 9 9 9 10 9 9 10 10 22 18 21 22 22 25 37 37 39 48 57 48 47 42 42 43 43 43 43 57 57 59 57 48 48 57 47
47 53 53 50 29 32 13 10 12 12 12 10 12 23 28 43 37 37 28 28 28 34 27 23 12 9 9 12 14 14 15 12 27 27 42 37 50 50 50 47 47 57 57 42 42 42 43 42 47 48
48 57 59 57 57 57 57 57 57 54 54 54 68 54 54 54 48 41 43 40 42 31 33 37 44 42 54 48 43 43 42 39 35 42 42 44 48 57 57 44 27 26 19 17 17 32 32 48 48 48
57 57 57 57 57 57 54 47 47 47 47 57 57 57 57 57 50 36 41 41 50 50 54 57 59 57 52 52 52 43 52 52 43 42 44 44 38 43 43 35 35 35 44 44 43 32 27 21 21 38
38 38 43 28 28 28 43 43 52 57 43 39 29 29 29 39 39 45 44 59 52 52 52 57 57 44 44 35 35 35 44 44 57 44 43 33 33 35 27 21 11 11 11 24 21 43 35 33 36 32
33 42 43 35 32 27 27 27 28 44 32 27 14 15 20 24 15 20 20 32 30 39 44 44 32 32 20 15 15 24 24 32 42 42 46 36 26 10 8 8 8 12 9 12 9 9 11 18 18 30
29 30 22 22 23 24 24 28 28 28 42 42 48 40 40 28 25 25 29 30 21 21 14 15 15 21 28 28 23 23 23 25 12 12 9 9 9 16 22 32 43 43 34 32 18 18 12 12 12 10
12 9 8 8 7 8 8 8 8 8 8 15 25 17 15 8 8 8 8 8 8 10 13 16 10 13 12 16 11 9 8 8 8 8 10 17 11 11 9 10 10 13 10 10 9 9 9 8 8 8
8 12 8 9 9 9 9 10 10 10 10 10 11 10 10 10 8 8 8 8 8 8 8 8 8 8 8 10 11 11 11 8 8 8 8 8 8 8 10 8 8 11 11 8 8 6 6 8 8 8
8 8 8 8 8 10 19 11 8 8 8 10 13 10 12 12 12 10 10 14 15 15 15 11 12 8 8 8 8 8 8 9 10 10 11 11 10 13 15 20 11 10 8 9 9 10 8 10 6 9
10 12 9 8 10 8 9 9 15 10 10 10 13 13 11 9 7 7 10 11 8 9 10 8 10 9 9 9 8 8 6 6 8 8 10 10 10 8 10 8 6 6 6 8 9 12 11 12 11 9
8 8 6 6 8 6 8 14 15 10 10 10 10 8 10 11 10 10 10 10 10 11 11 12 12 12 9 9 12 10 8 9 9 12 14 13 13 11 10 8 10 6 6 8 8 10 10 8 10 12
8 9 10 10 12 13 13 10 8 8 8 8 8 8 8 9 11 8 8 8 8 10 10 16 12 14 13 12 12 8 8 8 8 8 8 8 8 8 10 6 6 8 13 19 24 16 12 10 10 10
10 8 12 8 8 8 9 9 11 10 10 12 10 11 12 10 9 11 11 11 11 10 13 13 13 14 12 9 9 9 13 16 10 10 9 12 8 8 8 8 8 8 10 10 10 13 8 8 8 8
8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 10 8 10 8 9 10 9 9 9 9 9 10 10 10 10 10 8 10 8 8 8 8 6 6 8 6 6 10 8 9 9 11 14 10 10
9 8 8 8 8 10 10 8 9 10 10 11 13 11 10 10 8 8 6 6 8 10 7 9 12 12 27 25 28 28 33 21 21 20 20 14 15 11 10 15 17 28 28 15 19 8 8 8 8 10
12 14 16 9 9 9 15 13 6 6 8 8 8 8 11 11 13 16 12 10 11 9 9 9 10 10 10 10 10 12 21 16 13 14 9 8 8 8 8 10 8 9 9 10 14 18 23 12 12 9
9 8 9 9 9 10 11 8 8 8 8 8 8 10 10 13 10 8 8 8 8 8 8 12 9 9 9 10 12 10 8 8 8 8 10 10 10 12 10 8 8 8 8 10 8 8 8 7 9 9
9 8 8 8 8 8 8 10 8 8 6 6 8 8 8 8 8 8 8 11 11 10 10 8 8 8 8 8 8 8 8 8 9 8 10 7 7 6 6 8 8 8 8 8 10 6 6 8 13 15
14 9 8 9 9 9 9 8 8 8 8 8 8 8 15 11 14 10 13 12 13 23 23 19 12 13 8 8 8 8 7 8 9 9 11 11 11 9 9 9 9 9 9 10 9 9 9 9 9 9
8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 6 6 8 8 10 10 10 10 11 11 10 10 12 8 8 6 6 8 8 9 9 12 11 18 18 9 9 8 8 11 10 8 8 11 10
15 15 24 21 18 13 9 9 9 9 9 9 9 10 13 8 8 8 8 6 6 13 12 11 13 15 12 19 13 13 10 11 8 10 7 6 6 6 10 8 10 6 6 8 8 8 8 8 8 10
8 8 8 8 8 6 6 8 10 12 7 7 13 8 8 8 7 6 8 8 10 8 8 8 8 10 9 9 9 9 10 11 8 13 6 7 7 7 8 10 14 12 13 11 11 9 14 10 8 9
9 10 8 11 11 18 14 16 19 19 18 20 16 15 9 9 13 15 20 16 15 13 10 10 6 6 8 8 9 10 9 9 8 8 8 8 10 7 7 8 10 18 15 11 9 8 8 6 6 8
8 10 10 10 12 16 10 10 10 10 9 10 10 14 14 12 12 8 8 8 6 9 9 13 16 17 13 11 12 8 7 8 8 12 15 8 8 6 6 8 6 6 10 8 8 8 8 8 9 9
10 15 9 10 8 8 8 8 8 8 8 7 7 8 9 12 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 9 10 8 8 8 8 8 8 8 |