XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TTTGTTTAGCTCTGTACTCCATGTTTTAATTGGGTTATTTGATTTGTTAG
AGTCTAATTTCTTGAATTCTTTGTTTATTTTGTTTATTATAACAGCTCTC
TGTCAGATGTAGGATTGGTGAAGATCATTTTCCAATCTGTAGGCTGCCAT
TTTGACCTATTGACAATATCCCTTTTCTTACAGAAATATTTTCAGTTTCA
TGAGGTTATATTTATTATTTTTTGATTGTAGTACCTGAGCTGTTAGTGTT
TTTCTCAGGAAGTTGACTCCTTTATCAATGTGTTGAAGGTTATTCCCCAC
TTTCTATTCTATTAAATTTACTATATCCGTTTTTGGTTGAGGTCTTTGAT
CCTGATCTTGTGCAGGGTTATCAGTGTGGATCCATTTGCATTCTTCTTCT
ACATGCAGACATACACTTAGATCAGCACTATTTTTCCTTTCTTTCTCATA
TCTCTTCTTAAATATTTTACAAAGCCTTGATATTTAAATAGCAATCAATA
AAAATTGACTAAATGCAAAGGATTATCCCATGATTGCTGGAGCAATGATG
AGTACAACAGCTTTCTCATTCACTATTTTAGCTAAAATTCATTTCCTTTC
AATCAAAACAATGAAAATTTGTTGAAAATTCATTATCTCTAGTAGATGAT
ACTGACTGAAGAAA

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTTTCTTCAGCTCATTACCCCACTTTTAATAAGG
TTATTTGGTTCTCTGGAGTCTAAGAATAAATAAAGGAAATGTGATACATT
TACACAATGGAGAAGTACTCCATTTGTAGTACTTGTAGTATTTGGATACT
TTGGTCCTTCTTAGAATGGAGAACAAAATATCCAATAGGAGGAGATACAG
AGACAAAGTTTGGAGCAGAGACTGAAGGAAAGGCCATCCAGAGACTGCCC
TACCTGGGGATATATCCCATATACAGTTACCAAACCCAGACACTATTGTG
GATTCCAACAAGTGATTGTTGACAGGAGCCTGTATAGCTGTCTCCTGAGA
GGCTCTGCCAGTTCCTCACAAATACAGATGCTCACAACCAACCATTGGAC
TGAGCACAGCGTCCCCAATGGAGGAACTAGAGAAAGGAATGAAGTAGCTG
AAGGGGTTTGCAGCCCCAGAGGAAGAACAACAATATGAACTAACCAGTAC
CCCCAGAGCTCCCAGGGACAAAACCACCAACCAAAGATACACATGCAGGG
ACTCATGGCTACGGCTGCATATGTGGCAGAGGATGGCCTTGTAGGATATC
AATGGGAGGAGAGGCCCTTGATCCTGTAAAGGCTTGAGGCCCCATTGTAG
GGAAATGCCATTG

Query= MSMg01no052_e12.b1 MSMg01no052_e12.b1 CHROMAT_FILE:
MSMg01no052_e12.b1 PHD_FILE: MSMg01no052_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:51 2005
         (633 letters)



>mm_chr2_95360029_95361061
          Length = 1033

 Score = 1193 bits (617), Expect = 0.0
 Identities = 626/629 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttgtttagctctgtactccatgttttaattgggttatttgatttgttagagtc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgtttagctctgtactccatgttttaattgggttatttgatttgttagagtc 264

                                                                       
Query: 65  taatttcttgaattctttgtttattttgtttattataacagctctctgtcagatgtagga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taatttcttgaattctttgtttattttgtttattataacagctctctgtcagatgtagga 324

                                                                       
Query: 125 ttggtgaagatcattttccaatctgtaggctgccattttgacctattgacaatatccctt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 325 ttggtgaagatcattttccaatctgtaggctgccattttgacctattgacaatttccctt 384

                                                                       
Query: 185 ttcttacagaaatattttcagtttcatgaggttatatttattattttttgattgtagtac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcttacagaaatattttcagtttcatgaggttatatttattattttttgattgtagtac 444

                                                                       
Query: 245 ctgagctgttagtgtttttctcaggaagttgactcctttatcaatgtgttgaaggttatt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgagctgttagtgtttttctcaggaagttgactcctttatcaatgtgttgaaggttatt 504

                                                                       
Query: 305 ccccactttctattctattaaatttactatatccgtttttggttgaggtctttgatcctg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccccactttctattctattaaatttactatatccgtttttggttgaggtctttgatcctg 564

                                                                       
Query: 365 atcttgtgcagggttatcagtgtggatccatttgcattcttcttctacatgcagacatac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atcttgtgcagggttatcagtgtggatccatttgcattcttcttctacatgcagacatac 624

                                                                       
Query: 425 acttagatcagcactatttttcctttctttctcatatctcttcttaaatattttacaaag 484
           ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 625 acttagaccagcactatttttcctttctttctcatatctcttcttaaatattttaccaag 684

                                                                       
Query: 485 ccttgatatttaaatagcaatcaataaaaattgactaaatgcaaaggattatcccatgat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccttgatatttaaatagcaatcaataaaaattgactaaatgcaaaggattatcccatgat 744

                                                                       
Query: 545 tgctggagcaatgatgagtacaacagctttctcattcactattttagctaaaattcattt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgctggagcaatgatgagtacaacagctttctcattcactattttagctaaaattcattt 804

                                        
Query: 605 cctttcaatcaaaacaatgaaaatttgtt 633
           |||||||||||||||||||||||||||||
Sbjct: 805 cctttcaatcaaaacaatgaaaatttgtt 833


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space:   637329
Effective search space used:   637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)