MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-053H11
Chromosome	2 (Build37)
Map Location	104,692,499 - 104,692,736
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100042965, Lmo2, Fbxo3, Cd59b, Cd59a, A930018P22Rik, D430041D05Rik, LOC100043349, Hipk3, LOC383735, LOC668733, Cstf3, Tcp11l1, EG622282, OTTMUSG00000014964, Depdc7, Qser1, LOC100042995, 2310047K21Rik, LOC668744, Prrg4
Downstream gene	Ccdc73, Ga17, 2210415I11Rik, LOC622356, Wt1, 0610012H03Rik, Rcn1, Pax6os1, LOC100043391, Pax6, Elp4, LOC100043394
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042965 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042965
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Lmo2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16909 MGI:102811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fbxo3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57443 MGI:1929084
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cd59b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:333883 MGI:1888996
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cd59a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12509 MGI:109177
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A930018P22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68243 MGI:1915493
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D430041D05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241589 MGI:2181743
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043349 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043349
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 122 mRNAs, 3432 ESTs, 23 Proteins

name	Hipk3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15259 MGI:1314882
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383735 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383735
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC668733 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 26 ESTs, 1 Protein pseudo : _no_value

name	Cstf3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228410 MGI:1351825
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Tcp11l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320554 MGI:2444263
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622282 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622282 MGI:3646938
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	OTTMUSG00000014964 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241593 MGI:3649546
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Depdc7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211896 MGI:2139258
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Qser1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99003 MGI:2138986
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 121 ESTs, 2 Proteins

name	LOC100042995 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	2310047K21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71928 MGI:1919178
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs

name	LOC668744 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668744
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins pseudo : _no_value

name	Prrg4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228413 MGI:2442211
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc73 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211936 MGI:3606488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ga17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98221 MGI:1351744
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2210415I11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78320 MGI:1925570
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC622356 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622356
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Wt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22431 MGI:98968
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	0610012H03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74088 MGI:1921338
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rcn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19672 MGI:104559
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pax6os1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:402728 MGI:3028033
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043391 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043391
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 27 mRNAs, 1450 ESTs, 10 Proteins

name	Pax6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18508 MGI:97490
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Elp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77766 MGI:1925016
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043394 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043394
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Lmo2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254347 GeneID:16909 MGI:102811
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM domain only 2 transcript_id : NM_008505.3

name	Fbxo3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46877054 GeneID:57443 MGI:1929084
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box protein 3 transcript_id : NM_212433.1

name	Fbxo3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46877053 GeneID:57443 MGI:1929084
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box protein 3 transcript_id : NM_020593.2

name	Cd59b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32469506 GeneID:333883 MGI:1888996
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD59b antigen transcript_id : NM_181858.1

name	Cd59a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371898 GeneID:12509 MGI:109177
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD59a antigen transcript_id : NM_007652.3

name	A930018P22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386934 GeneID:68243 MGI:1915493
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A930018P22 gene transcript_id : NM_026634.2

name	D430041D05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124358960 GeneID:241589 MGI:2181743
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D430041D05 gene transcript_id : NM_001033347.2

name	LOC100043349 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249982 GeneID:100043349
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 122 mRNAs, 3432 ESTs, 23 Proteins product : similar to glyceraldehyde-3-phosphate dehydrogenase transcript_id : XM_001479851.1

name	Hipk3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754199 GeneID:15259 MGI:1314882
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeodomain interacting protein kinase 3 transcript_id : NM_010434.1

name	Cstf3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892648 GeneID:228410 MGI:1351825
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cleavage stimulation factor, 3' pre-RNA, subunit 3 transcript_id : NM_145529.2

name	Cstf3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371724 GeneID:228410 MGI:1351825
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cleavage stimulation factor, 3' pre-RNA, subunit 3 transcript_id : NM_177253.2

name	Cstf3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82617561 GeneID:228410 MGI:1351825
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cleavage stimulation factor, 3' pre-RNA, subunit 3 transcript_id : NM_001037326.1

name	Tcp11l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366983 GeneID:320554 MGI:2444263
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : t-complex 11 like 1 transcript_id : NM_177190.3

name	EG622282 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94367123 GeneID:622282 MGI:3646938
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG622282 transcript_id : XM_886707.2

name	OTTMUSG00000014964 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343868 GeneID:241593 MGI:3649546
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, OTTMUSG00000014964 transcript_id : NM_001033768.2

name	Depdc7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450164 GeneID:211896 MGI:2139258
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEP domain containing 7 transcript_id : NM_144804.1

name	Qser1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249911 GeneID:99003 MGI:2138986
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 121 ESTs, 2 Proteins product : glutamine and serine rich 1 transcript_id : XM_001479246.1

name	LOC100042995 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249913 GeneID:100042995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : similar to glutamine and serine rich 1 transcript_id : XM_001479250.1

name	2310047K21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249915 GeneID:71928 MGI:1919178
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs product : RIKEN cDNA 2310047K21 gene transcript_id : XM_001479258.1

name	Prrg4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384247 GeneID:228413 MGI:2442211
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) transcript_id : NM_178695.4

name	Ccdc73 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286864 GeneID:211936 MGI:3606488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 73 transcript_id : NM_177600.3

name	Ga17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130110 GeneID:98221 MGI:1351744
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dendritic cell protein GA17 transcript_id : NM_145380.2

name	2210415I11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249918 GeneID:78320 MGI:1925570
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : RIKEN cDNA 2210415I11 gene transcript_id : XM_001479287.1

name	LOC622356 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249920 GeneID:622356
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 transcript_id : XM_001479293.1

name	Wt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120444921 GeneID:22431 MGI:98968
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Wilms tumor homolog transcript_id : NM_144783.2

name	0610012H03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21311852 GeneID:74088 MGI:1921338
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 0610012H03 gene transcript_id : NM_028747.1

name	Rcn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89179319 GeneID:19672 MGI:104559
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reticulocalbin 1 transcript_id : NM_009037.2

name	LOC100043391 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249990 GeneID:100043391
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 27 mRNAs, 1450 ESTs, 10 Proteins product : similar to QM protein transcript_id : XM_001479903.1

name	Pax6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227195 GeneID:18508 MGI:97490
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired box gene 6 transcript_id : NM_013627.3

name	Elp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803399 GeneID:77766 MGI:1925016
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : elongation protein 4 homolog (S. cerevisiae) transcript_id : NM_023876.3

name	LOC100043394 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249992 GeneID:100043394
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043394 transcript_id : XM_001479906.1

name	Lmo2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678702 CCDS:CCDS16482.1 GeneID:16909 MGI:102811
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : LIM only 2 product : LIM domain only 2 protein_id : NP_032531.1

name	Fbxo3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46877055 CCDS:CCDS16484.1 GeneID:57443 MGI:1929084
definition	GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; F-box protein FBA; F-box only protein 3 product : F-box only protein 3 isoform 1 protein_id : NP_997598.1

name	Fbxo3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10181216 CCDS:CCDS16485.1 GeneID:57443 MGI:1929084
definition	GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; F-box protein FBA; F-box only protein 3 product : F-box only protein 3 isoform 2 protein_id : NP_065618.1

name	Cd59b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32469507 CCDS:CCDS16486.1 GeneID:333883 MGI:1888996
definition	GO_component : GO:0009986 - cell surface [Evidence IDA] GO_process : GO:0001971 - negative regulation of activation of membrane attack complex [Evidence IDA]; GO:0045916 - negative regulation of complement activation [Evidence IDA]; GO:0045918 - negative regulation of cytolysis [Evidence IDA] codon_start : 1 product : CD59b antigen protein_id : NP_862906.1

name	Cd59a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671714 CCDS:CCDS16487.1 GeneID:12509 MGI:109177
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0048503 - GPI anchor binding [Evidence IEA] codon_start : 1 note : CD59 antigen product : CD59a antigen protein_id : NP_031678.1

name	A930018P22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386126 CCDS:CCDS16488.1 GeneID:68243 MGI:1915493
definition	codon_start : 1 product : hypothetical protein LOC68243 protein_id : NP_080910.1

name	D430041D05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124358961 GeneID:241589 MGI:2181743
definition	codon_start : 1 product : hypothetical protein LOC241589 protein_id : NP_001028519.2

name	LOC100043349 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249983 GeneID:100043349
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479901.1

name	Hipk3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754200 CCDS:CCDS16489.1 GeneID:15259 MGI:1314882
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS]; GO:0005634 - nucleus [Evidence TAS] [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence ISS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0019901 - protein kinase binding [Evidence IPI]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence IDA]; GO:0003714 - transcription corepressor activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0043508 - negative regulation of JNK activity [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0018105 - peptidyl-serine phosphorylation [Evidence IDA]; GO:0018107 - peptidyl-threonine phosphorylation [Evidence IDA]; GO:0043388 - positive regulation of DNA binding [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation function : phosphorylates homeodomain transcription factors note : HCMV-interacting protein product : homeodomain interacting protein kinase 3 protein_id : NP_034564.1

name	Cstf3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704042 CCDS:CCDS16490.1 GeneID:228410 MGI:1351825
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : cleavage stimulation factor subunit 3 isoform 1 protein_id : NP_663504.1

name	Cstf3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82617610 GeneID:228410 MGI:1351825
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : cleavage stimulation factor subunit 3 isoform 2 protein_id : NP_796227.1

name	Cstf3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82617562 GeneID:228410 MGI:1351825
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : cleavage stimulation factor subunit 3 isoform 3 protein_id : NP_001032403.1

name	Tcp11l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893201 CCDS:CCDS16491.1 GeneID:320554 MGI:2444263
definition	codon_start : 1 product : t-complex 11 like 1 protein_id : NP_796164.1

name	EG622282 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82886612 GeneID:622282 MGI:3646938
definition	codon_start : 1 product : hypothetical protein protein_id : XP_891800.1

name	OTTMUSG00000014964 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702071 GeneID:241593 MGI:3649546
definition	codon_start : 1 product : hypothetical protein LOC241593 protein_id : NP_001028940.1

name	Depdc7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450165 CCDS:CCDS16492.1 GeneID:211896 MGI:2139258
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : DEP domain containing 7 protein_id : NP_659053.1

name	Qser1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249912 GeneID:99003 MGI:2138986
definition	codon_start : 1 product : glutamine and serine rich 1 protein_id : XP_001479296.1

name	LOC100042995 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249914 GeneID:100042995
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479300.1

name	2310047K21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249916 GeneID:71928 MGI:1919178
definition	codon_start : 1 product : hypothetical protein LOC71928 protein_id : XP_001479308.1

name	Prrg4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559846 CCDS:CCDS16493.1 GeneID:228413 MGI:2442211
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : transmembrane gamma-carboxyglutamic acid protein 4 protein_id : NP_848810.2

name	Ccdc73 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29243964 CCDS:CCDS16494.1 GeneID:211936 MGI:3606488
definition	codon_start : 1 product : coiled-coil domain containing 73 protein_id : NP_808268.1

name	Ga17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703762 CCDS:CCDS16495.1 GeneID:98221 MGI:1351744
definition	codon_start : 1 product : dendritic cell protein GA17 protein_id : NP_663355.1

name	2210415I11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249919 GeneID:78320 MGI:1925570
definition	codon_start : 1 product : hypothetical protein LOC78320 protein_id : XP_001479337.1

name	LOC622356 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249921 GeneID:622356
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479343.1

name	Wt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120444922 CCDS:CCDS16496.1 GeneID:22431 MGI:98968
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0030855 - epithelial cell differentiation [Evidence IMP]; GO:0001747 - eye development (sensu Mammalia) [Evidence IMP]; GO:0007281 - germ cell development [Evidence IMP]; GO:0008584 - male gonad development [Evidence IMP]; GO:0001823 - mesonephros development [Evidence IMP]; GO:0001656 - metanephros development [Evidence IMP]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0009888 - tissue development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA]; GO:0001570 - vasculogenesis [Evidence IMP] codon_start : 1 product : Wilms tumor 1 protein_id : NP_659032.2

name	0610012H03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311853 GeneID:74088 MGI:1921338
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003824 - catalytic activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC74088 protein_id : NP_083023.1

name	Rcn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677691 CCDS:CCDS16498.1 GeneID:19672 MGI:104559
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 product : reticulocalbin 1 protein_id : NP_033063.1

name	LOC100043391 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249991 GeneID:100043391
definition	codon_start : 1 product : similar to QM protein protein_id : XP_001479953.1

name	Pax6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305369 CCDS:CCDS16499.1 GeneID:18508 MGI:97490
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence TAS] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence TAS] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IGI] [Evidence IMP]; GO:0007411 - axon guidance [Evidence IMP]; GO:0007409 - axonogenesis [Evidence IMP]; GO:0007420 - brain development [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IMP]; GO:0045165 - cell fate commitment [Evidence IMP] [Evidence IGI]; GO:0001709 - cell fate determination [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0001747 - eye development (sensu Mammalia) [Evidence IMP] [Evidence IGI]; GO:0042462 - eye photoreceptor cell development [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0001764 - neuron migration [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0030334 - regulation of cell migration [Evidence IMP]; GO:0050767 - regulation of neurogenesis [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence TAS]; GO:0007435 - salivary gland morphogenesis [Evidence IMP]; GO:0007367 - segment polarity determination [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : small eye; Dickie's small eye; paired box protein product : paired box gene 6 protein_id : NP_038655.1

name	Elp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542608 CCDS:CCDS16500.1 GeneID:77766 MGI:1925016
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : elongation protein 4 homolog protein_id : NP_076365.2

name	LOC100043394 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249993 GeneID:100043394
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479956.1

name	LOC100042965 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042965
definition	number : 2 pseudo : _no_value

name	LOC100042965 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042965
definition	number : 1 pseudo : _no_value

name	LOC383735 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383735
definition	number : 1 pseudo : _no_value

name	LOC668733 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249908 GeneID:668733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 26 ESTs, 1 Protein product : similar to 2310047B19Rik protein pseudo : _no_value transcript_id : XR_034108.1

name	LOC668744 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249917 GeneID:668744
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins product : similar to Tardbp protein pseudo : _no_value transcript_id : XR_034128.1

name	Pax6os1 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:144226218 GeneID:402728 MGI:3028033
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Pax6 opposite strand transcript 1 transcript_id : NR_002867.2

clone name	MSMg01-519I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377G16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-448C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165J17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-525P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546N18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-061D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384K11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-192C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408M18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-416N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521D23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-234N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291G16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-053H11.T7 (MSMg01no053_h11.b1)	MSMg01-053H11.TJ (MSMg01no053_h11.g1)
ACC	AG281674	AG281675
length	832	705
length of high quality (start - end)	79 (44 - 122)	238 (73 - 310)
definition	CHROMAT_FILE: MSMg01no053_h11.b1 PHD_FILE: MSMg01no053_h11.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 16:54:23 2005	CHROMAT_FILE: MSMg01no053_h11.g1 PHD_FILE: MSMg01no053_h11.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 16:54:23 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA TTCTGTCCTATCTTTAGAGATAATTTCCCAGCTTTGTAGCACGGGATGGC ATGGGGTAGGGAGGGGAAAGGGGATAACGGATCTTGATGTGTCTGTTTGG TCTCCGCGATCCCGCTCCCCCGTCACCGCTTCTGTATTTCTCTTTCCGAG GATGAGTTCAGATGATAGACATATAACACGATTGTTTTTGCCAACTCTCT ACTTTTTAATTATTATAATCATACCTCTATCTCGCCAACCCACATTGATT TCTCCAACAAATGTTATGAGAGTCCCCCCGGCACTGCTATTATTGTTCGC CGTCCCTCTAACGTTTTTGCTGTCCCCCTTTTTTACCACCCCCCCCCTAT CTTTTCTCCATACACCCCTCGTTTATTGCTCCCCGAATTATGTTCCTTGT TATTCTCTTGCGCCACCCCCATTATTTCCGCGCGCCGATCCCTTCCTTTT GTTATTTTGCCACACCGTTCTGCTTTTTGCACCCCCTTCCACCCAGTTTC TTCTTTCATCGCGCGGCGGTGCGTTCTTTTTACTTCATTTCCGCAGCCCC ACTTGTATTTATTCCTTATTTCCGCACCCTCACTCTTCCCCGGCATTGTT TATATTTCCCTCTTCTATTTCCCTGTTCTTCGAGCGTCCATACCTCGAAA ACAACCGTTAGAACACAACTAATTACGATGAACGTCCGTCCCGCGAATAA CATACCGTAAACGCTAATTACCCACTTATTTGCCGCACGAGCGTATAAAA TTCGCTGGATAATGCCGGAGCGATTACACGCN	CAATGAAGTGGGAGGCCTGGCGGCGCCTTTTCAAACATTTAGGTGAACTA TAGATATTACAGAAGAAATTCCTAGGTAAGTGGGTGGGTGTGTATGTGCT CAAACCCAGAGATGCGTTGACACATCATCCAAGTCCATTAATCTCATTGC TCTATTTTGCCCTTTTTTTCTTATTACCTTTGAAATTAAACAATCCTTTA CCCATTGCCCTTCATTGCTTAATTATTCAGAGACAGGACTGGAAAGACTC AGGAACCTGGCTCCTTATGCGTTCACTTTGCCGTGCTTCAATGTCCTTCT GCGTGAAATGTGTTTTATAGCACCTGGTCCAGCTCTACTGATGGCAGAGA AATGCTTTCTGGAAGAGAACTTAAAATACTTTAGGACAAATAAAAGTGTA AGGATGTTGTGATTATAAAAAATAATAATAAAATAATAAATCAAATGCAG AAGAAAATAAGTAATTAACAGAACAAATCAAGCGTCTGCTATTAACTCTC TCCTTCTCTCTTCCCCTCCCCGCCCCCCCCATCCCCAGAACATCTTTCAT CTCCATATTGACCATGTATGTGCCCTGCCTCGTGATATATCATCTTACGT TCCATATCCCAAGGTCACGTGTATCTCGCCAATCTACTTTTGACAAATTT TTTTGTTTTTTCCGACTCCTCTCCACTCACCGGCCGTTTATTAATGCCCC TACTT
quality values	Open. Hide. 9 9 9 9 9 13 24 22 12 19 12 12 12 21 30 31 33 33 31 33 33 33 43 20 18 20 13 13 8 9 9 10 9 10 10 10 10 12 17 11 8 8 10 13 28 34 41 32 26 24 28 23 23 30 28 28 18 24 17 10 9 9 9 9 15 15 22 23 28 31 29 33 28 28 28 36 33 28 28 28 29 29 41 33 33 30 22 15 9 9 9 9 10 21 26 28 28 28 33 33 33 33 37 33 33 30 30 39 39 43 48 48 48 48 48 43 43 43 34 26 18 13 13 13 23 21 22 17 15 15 15 12 11 11 13 10 8 8 8 8 8 6 6 6 6 6 10 6 6 6 7 10 12 12 12 8 6 8 6 6 8 8 10 12 15 15 11 11 8 8 6 6 6 8 10 12 6 8 6 6 10 10 6 6 8 6 8 8 8 8 10 11 12 21 12 15 10 10 11 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 10 11 10 8 8 8 6 8 8 8 8 8 8 6 6 6 6 8 8 10 13 18 11 12 12 12 11 11 15 12 12 9 9 8 8 8 8 8 8 8 10 8 7 7 8 8 6 6 6 6 8 8 8 8 8 6 6 8 8 8 8 8 8 8 6 6 6 6 8 8 10 8 7 9 9 11 11 13 13 11 11 8 8 8 8 8 8 8 8 8 8 8 10 11 15 18 18 11 9 9 9 9 9 10 10 10 9 9 10 13 10 9 9 8 8 8 8 8 8 8 6 6 6 6 6 6 8 7 8 6 6 6 8 8 9 9 8 11 10 12 10 10 8 8 8 8 8 8 9 10 16 10 12 8 8 8 8 8 8 8 11 8 8 10 13 11 12 9 10 12 12 12 9 9 9 12 9 9 10 11 13 10 10 10 10 10 10 13 10 10 11 11 6 6 6 6 6 6 9 9 12 10 10 8 13 8 8 8 9 9 9 9 12 10 9 9 9 9 8 8 8 8 8 10 11 11 9 10 10 10 9 8 8 8 9 8 10 10 10 8 6 6 8 8 8 8 8 10 8 10 9 9 10 9 9 9 8 11 10 10 10 8 7 8 6 6 8 6 9 8 8 8 11 11 9 12 12 10 10 10 10 10 10 13 10 8 8 8 6 6 8 6 11 11 11 6 8 6 6 8 8 8 8 8 8 8 8 8 8 8 10 18 13 10 8 8 8 8 10 8 11 10 10 13 10 9 10 6 8 6 6 8 8 9 10 11 8 8 8 8 8 8 6 6 8 8 11 10 10 10 6 6 6 6 7 6 8 8 8 8 8 10 13 10 9 8 10 8 10 8 11 8 8 8 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 12 6 6 6 8 11 12 6 8 6 6 8 8 8 6 6 6 6 8 6 9 9 12 19 16 22 15 16 11 13 6 8 6 6 8 6 6 8 8 8 9 9 9 11 12 12 11 12 12 8 10 8 8 8 8 6 6 6 6 10 10 9 8 10 8 8 8 8 8 8 6 8 6 6 8 8 8 8 10 8 8 8 8 10 10 8 8 8 6 6 8 8 8 7 7 8 8 7 6 10 8 9 9 9 8 8 8 6 6 6 6 8 8 8 8 8 8 10 10 9 12 10 6 10 7 6 6 6 6 6 8 8 9 9 10 8 8 8 6 6 8 8 10 8 8 8 6 6 6 8 8 9 10 9 8 8 8 6 8 8 6 6 8 6 8 8 8 8 8 10 8 8 6 6 8 8 8 8 8 8 8 8 8 10 12 10 19 13 11 11 11 11 11 8 8 8 8 8 8 8 10 8 8 8 8 6 6 6 6 8 8 8 6 6 9 9 8 8 8 6 6 6 3 0	Open. Hide. 9 9 9 8 8 8 8 8 10 15 9 9 10 12 16 25 30 30 37 21 14 9 9 9 22 14 17 11 7 6 6 6 7 7 8 9 8 12 11 17 10 15 19 21 9 10 13 27 27 33 27 21 8 8 7 9 7 7 9 6 6 6 6 6 7 9 17 19 10 10 8 10 10 21 21 47 47 36 35 35 29 26 14 18 20 24 31 20 20 31 32 48 48 48 54 48 48 42 42 42 46 42 48 46 46 24 24 18 20 20 27 36 37 37 35 37 37 39 48 57 47 47 50 50 50 50 50 41 41 41 50 47 47 47 57 57 57 57 57 48 48 48 48 50 50 48 48 50 57 57 68 68 68 68 68 68 57 57 57 47 47 52 57 57 57 57 57 57 57 57 57 52 52 52 52 57 57 57 52 52 52 52 50 50 50 50 50 50 54 54 54 54 54 57 57 57 59 57 57 54 54 54 57 57 44 43 33 33 43 44 43 43 35 35 35 44 59 59 59 57 27 27 9 9 9 27 27 43 19 19 19 25 28 42 39 39 43 37 35 35 32 24 24 18 12 17 19 24 22 25 15 20 20 32 32 54 44 44 39 30 30 24 30 36 46 46 57 57 48 48 48 48 48 48 57 57 54 43 47 41 41 41 32 32 30 27 27 28 28 28 28 30 39 39 43 47 59 48 43 43 34 34 25 25 25 33 23 19 10 10 7 7 7 9 13 10 11 11 12 12 15 26 30 37 31 23 20 25 19 26 24 30 39 40 43 48 57 57 43 43 33 30 24 23 23 30 30 22 15 11 23 23 30 31 30 39 39 37 26 21 13 12 15 12 12 14 18 15 30 30 30 30 24 32 30 42 47 46 54 43 32 26 13 13 13 20 24 36 37 35 31 28 20 20 16 16 16 19 24 19 24 12 12 12 27 27 32 30 18 14 14 19 28 36 36 24 18 14 13 13 18 18 22 29 30 35 32 32 30 32 28 31 28 23 19 15 11 11 12 16 23 18 13 12 12 20 13 13 16 13 13 13 15 15 28 29 31 29 19 15 14 8 10 8 8 8 8 15 25 15 19 15 22 11 10 10 12 20 28 20 20 15 25 12 12 11 21 15 17 13 11 11 11 21 24 41 41 41 28 28 24 20 20 20 32 32 43 43 39 39 39 37 28 28 28 32 37 47 34 24 19 11 11 11 13 18 24 21 13 10 8 7 7 8 10 12 15 16 16 25 30 36 37 37 30 25 22 18 18 11 11 11 17 11 8 8 6 6 10 6 8 9 10 10 12 21 25 19 13 8 8 6 6 8 13 13 15 15 12 10 11 10 10 13 10 10 12 14 15 12 10 13 13 12 12 15 9 9 9 9 9 10 9 9 9 12 10 12 10 10 11 10 11 11 10 10 10 15 11 11 8 8 7 7 12 8 9 8 7 9 7 10 10 6 6 8 6 8 8 8 10 10 11 11 8 10 7 9 8 8 12 12 8 10 8 8 8 12 13 15 16 12 8 8 8 8 8 10 10 12 10 13 8 8 8 8 15 8 8 8 10 8 8 8 9 9 9 8 8 8 8 8 8 8 8 8 8 8 8 10 9 9 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no053_h11.g1 MSMg01no053_h11.g1 CHROMAT_FILE:
MSMg01no053_h11.g1 PHD_FILE: MSMg01no053_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:23 2005
         (238 letters)



>mm_chr2_104692299_104692936
          Length = 638

 Score =  453 bits (234), Expect = e-132
 Identities = 237/238 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   taggtaagtgggtgggtgtgtatgtgctcaaacccagagatgcgttgacacatcatccaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 taggtaagtgggtgggtgtgtatgtgctcaaacccagagatgcgttgacacatcatccaa 379

                                                                       
Query: 61  gtccattaatctcattgctctattttgccctttttttcttattacctttgaaattaaaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gtccattaatctcattgctctattttgccctttttttcttattacctttgaaattaaaca 319

                                                                       
Query: 121 atcctttacccattgcccttcattgcttaattattcagagacaggactggaaagactcag 180
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 318 atcctttacccattgcccttcattgcttaataattcagagacaggactggaaagactcag 259

                                                                     
Query: 181 gaacctggctccttatgcgttcactttgccgtgcttcaatgtccttctgcgtgaaatg 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gaacctggctccttatgcgttcactttgccgtgcttcaatgtccttctgcgtgaaatg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space:   144041
Effective search space used:   144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information