Query= MSMg01no054_d05.b1 MSMg01no054_d05.b1 CHROMAT_FILE:
MSMg01no054_d05.b1 PHD_FILE: MSMg01no054_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:20 2005
(392 letters)
>mm_chr2_102250911_102251702
Length = 792
Score = 603 bits (312), Expect = e-177
Identities = 364/388 (93%), Gaps = 13/388 (3%)
Strand = Plus / Plus
Query: 6 gaattcacttctttcctacatgaagcatataggaggagtgggaggattagctaagctcag 65
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcacttctttactatatgaagcatataggaggagtgggaggattagctaagctcag 265
Query: 66 taaagggcctctgcaggggagcagttcagacttcagtcttccagggagtgggaagctgtg 125
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 taaggggcctctgcaggggagcagttcagacttcagtcttccagggagtgggaagctgtg 325
Query: 126 gttgatatcatctggacacattatcaacatctacactcagagcaacgagggcctttgcat 185
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 326 gttaatatcatctggacacattatcagcatctacactcagagcaacgagggcctttgcat 385
Query: 186 tcccatgggtttgaggcattgtggactttgacatggcgttcctgtcaataagatgtgaat 245
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 386 tcccatgggtttgaggcattgtggtctttgacatggcgttcctgtcaataagatgtg--- 442
Query: 246 aagatgtgctcattcaagatgtcattgcctctccacagactgacagtaatgaaattatat 305
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 --------ctcattcaagatgtcattgcctctccacagactgacagtaatgaaattatat 494
Query: 306 gatctgccttctctaccttcttccacgtagtagatgattagctctttttattgtttggtt 365
||||||||||||||||||||| ||| |||||||||| | ||||||||||||| |||||||
Sbjct: 495 gatctgccttctctaccttctcccatgtagtagatggtaagctctttttattttttggtt 554
Query: 366 tttttgacg-cagggtttctctgtgtag 392
||||||| | ||||||||||||||||||
Sbjct: 555 tttttga-gacagggtttctctgtgtag 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_d05.g1 MSMg01no054_d05.g1 CHROMAT_FILE:
MSMg01no054_d05.g1 PHD_FILE: MSMg01no054_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:20 2005
(249 letters)
>mm_chr2_102405997_102406645
Length = 649
Score = 458 bits (237), Expect = e-133
Identities = 246/249 (98%)
Strand = Plus / Minus
Query: 1 tttagaaatctaatatttggagttgtgcatcattgggaagggaagggcagtgagaattaa 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 449 tttagaaatctaatatttggagttgtgcatcattgggaagggaaggggagtgagaattaa 390
Query: 61 gtttatcacttgcttttcttcttctttcctcttcactttactgacacacagctccatgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gtttatcacttgcttttcttcttctttcctcttcactttactgacacacagctccatgtc 330
Query: 121 acagctctgcttcaatccccgtttaagtcacaccacacatcgtggctggctctcagtcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 acagctctgcttcaatccccgtttaagtcacaccacacatcgtggctggctctcagtcca 270
Query: 181 tgaaagtcaccagctcattggtccagtccacagaaccaccatttaaagtgagtgttgttt 240
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cgaaactcaccagctcattggtccagtccacagaaccaccatttaaagtgagtgttgttt 210
Query: 241 gcttcattt 249
|||||||||
Sbjct: 209 gcttcattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
