Query= MSMg01no054_h03.b1 MSMg01no054_h03.b1 CHROMAT_FILE:
MSMg01no054_h03.b1 PHD_FILE: MSMg01no054_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:38 2005
(372 letters)
>mm_chr2_96951736_96952504
Length = 769
Score = 615 bits (318), Expect = e-180
Identities = 359/374 (95%), Gaps = 7/374 (1%)
Strand = Plus / Plus
Query: 1 tggagctatacagagaaaccctggtctcgaaaaaccaaaa--aaaaaaaaaaaaaaaaaa 58
|||||||||||||||||||||| |||||||||||||||| |||| ||| |||||||||
Sbjct: 201 tggagctatacagagaaaccct-ttctcgaaaaaccaaaaccaaaataaataaaaaaaaa 259
Query: 59 acaaaaaaaaaaaaaaaaagagtactttccagtgagacaaggcaaagctgcaataaacat 118
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 a-aaaaaaaaaaaaaaaaagagtactttccagtgagacaaggcaaagctgcaataaacat 318
Query: 119 ttttcttagaattttttatactcttaagacagttgttaacacgatgaacacatgtagtta 178
||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 319 ttttcttagaattttttatactcttaagacagttgttaacatgatgaac-gatgtagtta 377
Query: 179 caacatgcttgaaatggaaattatcagctatggcaatcactagcactgttactttatata 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 caacatgcttgaaatggaaattatcagctatggcaatcactagcactgttactttatata 437
Query: 239 taaaatacagaaaatagtttctttacttatctacaataaagaataagaatgctaacatta 298
| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 438 t--aatacagaaaatagtttctttacttatcttcaataaagaataagaatgctaacatta 495
Query: 299 tatcatcctgtgtatacatgaaaagagtttattttgggatacttgagaatacattcagca 358
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 496 tatcatcctgtgtatacatgaaaagagtttattttgtgatacttgagaatacattcagta 555
Query: 359 gtgaattaatttta 372
||||||||||||||
Sbjct: 556 gtgaattaatttta 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 769
Length adjustment: 9
Effective length of query: 363
Effective length of database: 760
Effective search space: 275880
Effective search space used: 275880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_h03.g1 MSMg01no054_h03.g1 CHROMAT_FILE:
MSMg01no054_h03.g1 PHD_FILE: MSMg01no054_h03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:38 2005
(326 letters)
>mm_chr2_97155506_97156231
Length = 726
Score = 623 bits (322), Expect = 0.0
Identities = 325/326 (99%)
Strand = Plus / Minus
Query: 1 ttttaaagaattcattcccaattgctgattgatggcaaaacttctcaagggggtttattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttttaaagaattcattcccaattgctgattgatggcaaaacttctcaagggggtttattt 564
Query: 61 tgaggtattttatattttatttatatttacttatattgtgtctgttttcaacacacaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tgaggtattttatattttatttatatttacttatattgtgtctgttttcaacacacaaga 504
Query: 121 actgttgtaaatgtatgtcgaaaaaatggatcaccctaaataagtattccaagaaaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 actgttgtaaatgtatgtcgaaaaaatggatcaccctaaataagtattccaagaaaatct 444
Query: 181 ggttttgtgctttatgaacacagatacaggaaaccactatagcattcattttcaaagtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggttttgtgctttatgaacacagatacaggaaaccactatagcattcattttcaaagtgt 384
Query: 241 tatcaatgtgtatgctatgatgcaaatcagcagctctttgcaaacactatattccgaaga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 383 tatcaatgtgtatgctatgatgcaaatcagcagctctttgcaaacactatattcagaaga 324
Query: 301 aaaataaagacatttcacctttctgt 326
||||||||||||||||||||||||||
Sbjct: 323 aaaataaagacatttcacctttctgt 298
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
