Query= MSMg01no054_m02.b1 MSMg01no054_m02.b1 CHROMAT_FILE:
MSMg01no054_m02.b1 PHD_FILE: MSMg01no054_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:01 2005
(346 letters)
>mm_chr2_148592615_148593360
Length = 746
Score = 379 bits (196), Expect = e-109
Identities = 211/216 (97%)
Strand = Plus / Plus
Query: 1 cctgacatgggtcctgtgaacagaacccatgttctctgcaagagggaagccctcttaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgacatgggtcctgtgaacagaacccatgttctctgcaagagggaagccctcttaacc 260
Query: 61 tctgagccgtttctccagtcccagtttgagatattttaaacaatacaagcatgtctgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctgagccgtttctccagtcccagtttgagatattttaaacaatacaagcatgtctgaca 320
Query: 121 agttatttaaagtatgcctccaagtaatttaattaagtaagtaagtaagtatacattcat 180
||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 321 agttatttaaagtctgcctccaagtaatttaattaattaagtaagtaagtatatattcat 380
Query: 181 gttttattgaaaatactggtgaacatcttcaaactt 216
||||||| |||||||||||||||||||||||||||
Sbjct: 381 gttttatccaaaatactggtgaacatcttcaaactt 416
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_m02.g1 MSMg01no054_m02.g1 CHROMAT_FILE:
MSMg01no054_m02.g1 PHD_FILE: MSMg01no054_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:01 2005
(526 letters)
>mm_chr2_148719369_148720296
Length = 928
Score = 986 bits (510), Expect = 0.0
Identities = 523/528 (99%), Gaps = 2/528 (0%)
Strand = Plus / Minus
Query: 1 agagaaataaaaacacaaaaagaggtactgttgccacatttagagtttacagaagggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 agagaaataaaaacacaaaaagaggtactgttgccacatttagagtttacagaagggagg 669
Query: 61 ctgagaagcgctcaaagttccatttcagtctcacagtttgcaattaacaaacaacatgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ctgagaagcgctcaaagttccatttcagtctcacagtttgcaattaacaaacaacatgag 609
Query: 121 gtaaaaataaaactgtaaacgagaaa--ctctctatctagccacacctacacctcttact 178
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 608 gtaaaaataaaactgtaaacgagaaactctctctatctagccacacctacacctcttact 549
Query: 179 aggctcccaattttcatcatttaaactctaataatgccataaagatgttgggtacataac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aggctcccaattttcatcatttaaactctaataatgccataaagatgttgggtacataac 489
Query: 239 tatatagaacacccagactcctcacagttctgatccttcaaggccaaatccagttgtaac 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tatatagaacacccagactcctcacagttctgatccttcaaggccaaatccagttgtaac 429
Query: 299 cttctcctcccttgtattgctgtagttctgtgatcctaactgccccaaggcttccctgca 358
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 428 cttctcctcccttgtattgctgtagttctgtgatcctaactgccccaagtcttccctgca 369
Query: 359 cctgggtccaattaaaaagcaccagggtacatgatgcccctacccatctagttcctaaca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cctgggtccaattaaaaagcaccagggtacatgatgcccctacccatctagttcctaaca 309
Query: 419 gatataaatctcaaaccttcactcagataaagcaaatttgtgttgggattttattttcag 478
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 308 gatataaatctcaaaccttcactcaaataaagcaaatttgtgttgggatttttttttcag 249
Query: 479 ctatgtgataataatgacaatatcaacagagctttccaagtttccacg 526
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ctatgtgataataatgacaatatcaacagagctttccaagtttccacg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 928
Length adjustment: 10
Effective length of query: 516
Effective length of database: 918
Effective search space: 473688
Effective search space used: 473688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|