Query= MSMg01no055_a22.b1 MSMg01no055_a22.b1 CHROMAT_FILE:
MSMg01no055_a22.b1 PHD_FILE: MSMg01no055_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:23 2005
(656 letters)
>mm_chr2_74036794_74037849
Length = 1056
Score = 1222 bits (632), Expect = 0.0
Identities = 647/652 (99%)
Strand = Plus / Plus
Query: 5 gaattctgagtatgcctttccctcatcctaccacccctttgcctctgcctttctatctca 64
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgagtgtgtctttccctcatcctaccacccctttgcctctgcctttctatctca 264
Query: 65 ttagcatacgttcctgccaccatcatgtggtcctctgggtattgaggtccacaattcggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttagcatacgttcctgccaccatcatgtggtcctctgggtattgaggtccacaattcggt 324
Query: 125 tccctcttagtctctgttttgatcattcttttatggtttgtcgttgtatcctcagcccag 184
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 325 tccctcttagtctctgttttgatcattcttttatggtttgccgttgtatcctcagcccag 384
Query: 185 gagtgtcttcaatgagttggttcctgttcaccagggacgtaagctctctggtcttctcct 244
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 385 gagtgtcttcaatgagttggttcctgttcaccagggacataagctctctggtcttctcct 444
Query: 245 tcaggcctagcacttgtatcttcgttaccgatgactgcatagtgtcctgtctgcagtttc 304
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcagacctagcacttgtatcttcgttaccgatgactgcatagtgtcctgtctgcagtttc 504
Query: 305 tctgcacatggtcaccacttgtggcaatcatatgtcttatgcatttgcaaatatttatct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctgcacatggtcaccacttgtggcaatcatatgtcttatgcatttgcaaatatttatct 564
Query: 365 gtaattgctgtttgggatactaatagagagtaagaggagagacaaaagatgatgaatgcc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtaattgctgtttgggatactaatagagagtaagaggagagacaaaagatgatgaatgcc 624
Query: 425 ctactgagacagagaagtttttcaagcttgtctcttacaccagtggcttaatgcccggta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctactgagacagagaagtttttcaagcttgtctcttacaccagtggcttaatgcccggta 684
Query: 485 gcctgttttattagtgccctaaagggggattttaatttggggactgatattcttattttc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcctgttttattagtgccctaaagggggattttaatttggggactgatattcttattttc 744
Query: 545 attatgtccattctcatttcaccatcttccgtttgcactttgttcctatcttagagaacc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 attatgtccattctcatttcaccatcttccgtttgcactttgttcctatcttagagaacc 804
Query: 605 cactcttctctttcctcatttcctcttcgtcttccttcctttcttgttcctc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 cactcttctctttcctcatttcctcttcgtcttccttcctttcttgttcctc 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_a22.g1 MSMg01no055_a22.g1 CHROMAT_FILE:
MSMg01no055_a22.g1 PHD_FILE: MSMg01no055_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:23 2005
(496 letters)
>mm_chr2_74113735_74114630
Length = 896
Score = 555 bits (287), Expect = e-162
Identities = 331/355 (93%), Gaps = 15/355 (4%)
Strand = Plus / Minus
Query: 1 ccagaagctcctgggccagctagcataaaacagcaaaggactctgtcttaaacaaggtag 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 357 ccagaagctcctgggccagctagcatcaaacagcaaaggactctgtcttaaacaaggtag 298
Query: 61 aaggtggggcacaacacctatgattattcgctgacccagacgtgtgacatggcacatgtg 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aaggtggggcccaacacctatgattattcgctgacccagacgtgtgacatggcacatgtg 238
Query: 121 tgcctctattcacgcacatgaaggtacccacacctagatacaaaatgcacatacacacac 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 tgcctctattcacgaacatgaaggtacccacacctagatacaaaatgcacatacacacac 178
Query: 181 ataggcaaaattgaactataaaaataaattcaaatattccataggaaaatcagaaaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 177 ataggcaaaattgaactataaaaataaattcaaatattccataggaaaatcagaaaagaa 118
Query: 241 tccaataaaccaacagagaaacaaaactagtgatacaaaaaaa---------------at 285
||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 117 tccaataaaccaacagagaaacaaaactagtgatacaaaaaaaaaaaaaaaaaaaaagat 58
Query: 286 ttataaagctgggcatggtgtcgcatgcctttaattccagcactcgggaggcaga 340
||||||||| ||||||||||| |||||||||||| |||||| ||||||||||||
Sbjct: 57 ttataaagccaggcatggtgtcacatgcctttaatcccagcagtcgggaggcaga 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
