Query= MSMg01no055_e14.b1 MSMg01no055_e14.b1 CHROMAT_FILE:
MSMg01no055_e14.b1 PHD_FILE: MSMg01no055_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:39 2005
(244 letters)
>mm_chr2_4662965_4663608
Length = 644
Score = 414 bits (214), Expect = e-120
Identities = 232/238 (97%)
Strand = Plus / Plus
Query: 4 ggaattctggctcttccgatgctaagtacattaaaatatcattatatatttatttgtgat 63
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctggctcatacgatgctaagtacattaaaatatcattatatatttatttgtgat 263
Query: 64 ctacatttttttctcatagtctcttctgtctgttttttctcctcacattttaaattttaa 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctacatttttttctaatagtctcttctgtctgttttttctcctcacattttaaattttaa 323
Query: 124 gcatttattacgataacttcatggctatgtgtacatactttgaaataaggtttccagtgc 183
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcatttattaggatgacttcatggctatgtgtacatactttgaaataaggtttccagtgc 383
Query: 184 ttcagttagcgggaatcacgcttcctctctaagatgatattgttactatagagattaa 241
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttcagttagcgggaatcacacttcctctctaagatgatattgttactatagagattaa 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no055_e14.g1 MSMg01no055_e14.g1 CHROMAT_FILE:
MSMg01no055_e14.g1 PHD_FILE: MSMg01no055_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:40 2005
(197 letters)
>mm_chr2_4789672_4790267
Length = 596
Score = 240 bits (124), Expect = 5e-68
Identities = 146/154 (94%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 1 aggtcatcaggtttagggacaagttcctttgccagctggataatcttgctggcccccaaa 60
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 306 aggtcatcaggtttagggacaagttccattgccagctggataatc-tgctggcccccaaa 248
Query: 61 tggagtgaggtctggttaccaggaaggggatcctggcctcttggcgcctctctctctctc 120
| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 247 tagagtgaggtctggtttccaggaaggggatcctggcctcttggcgcctctctctccctc 188
Query: 121 tctctctctc--tctctctctctctctctctctc 152
|||||||||| |||||||||| |||||||||||
Sbjct: 187 tctctctctccttctctctctccctctctctctc 154
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 596
Length adjustment: 8
Effective length of query: 189
Effective length of database: 588
Effective search space: 111132
Effective search space used: 111132
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
