Query= MSMg01no055_h18.b1 MSMg01no055_h18.b1 CHROMAT_FILE:
MSMg01no055_h18.b1 PHD_FILE: MSMg01no055_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:54 2005
(311 letters)
>mm_chr2_115527277_115527987
Length = 711
Score = 572 bits (296), Expect = e-168
Identities = 305/308 (99%), Gaps = 2/308 (0%)
Strand = Plus / Plus
Query: 5 gaattccctatttccc-ttaacttaggccatatgcctgctatccctgccctcctcctcac 63
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccctata-cccattaacttaggccatatgcctgctatccctgccctcctcctcac 263
Query: 64 attcctatagcctactctccgatttatatgagtttcattccactacgctccccctagcac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 attcctatagcctactctccgatttatatgagtttcattccactacgctccccctagcac 323
Query: 124 cccagtcacagacattcagatgcttcttgattctttttcctcctcccttattttctcaca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cccagtcacagacattcagatgcttcttgattctttttcctcctcccttattttctcaca 383
Query: 184 cgggttctgcagctatacttgatcacccctgcttgcttttcttaaattcctttttttcat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cgggttctgcagctatacttgatcacccctgcttgcttttcttaaattcctttttttcat 443
Query: 244 taccttcccgtgcgttgctgtcggctgtggtggttatcatccctcccacactttaatttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 taccttcccgtgcgttgctgtcggctgtggtggttatcatccctcccacactttaatttc 503
Query: 304 attttaga 311
||||||||
Sbjct: 504 attttaga 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_h18.g1 MSMg01no055_h18.g1 CHROMAT_FILE:
MSMg01no055_h18.g1 PHD_FILE: MSMg01no055_h18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:54 2005
(399 letters)
>mm_chr2_115684987_115685785
Length = 799
Score = 754 bits (390), Expect = 0.0
Identities = 396/398 (99%)
Strand = Plus / Minus
Query: 1 ccgtctgcaagttgatggcctgacccttaaactcctttgccaatcctccttcagggtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ccgtctgcaagttgatggcctgacccttaaactcctttgccaatcctccttcagggtgtg 539
Query: 61 cctggccaagcatctcttggtagcctggagtgagttcgcacgtgggagaaaggtgtggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cctggccaagcatctcttggtagcctggagtgagttcgcacgtgggagaaaggtgtggag 479
Query: 121 gaggaatggactgaccggtctgcagggcagatttgcactttgttgtaggcaactctgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gaggaatggactgaccggtctgcagggcagatttgcactttgttgtaggcaactctgctt 419
Query: 181 gggcagctggggggccccgtggggatagtcccccctcccgccactccgcctgtcccgcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gggcagctggggggccccgtggggatagtcccccctcccgccactccgcctgtcccgcat 359
Query: 241 ggggctggctggttttgtcttgcaacagtttgggatctggacaagtcccctctcctgccc 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 358 ggggctggctggttttgtcttgcaacagtttgggatctggacaagccccctctcctgccc 299
Query: 301 ccacctcgccgcccgaggcttttcttccctcttcggcctctggctgggcggcgctctagg 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 298 ccacctcgccgcccgaggcttttcttccctctccggcctctggctgggcggcgctctagg 239
Query: 361 tccttgtaggtgtttctatgactacattgtgtgtgtgg 398
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tccttgtaggtgtttctatgactacattgtgtgtgtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
