Query= MSMg01no056_n07.b1 MSMg01no056_n07.b1 CHROMAT_FILE:
MSMg01no056_n07.b1 PHD_FILE: MSMg01no056_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:35 2005
(291 letters)
>mm_chr2_72526060_72526751
Length = 692
Score = 480 bits (248), Expect = e-140
Identities = 281/292 (96%), Gaps = 1/292 (0%)
Strand = Plus / Plus
Query: 1 cttggccccagagtgtatgggggaggggagtggagtcagagaagcctcctgaccaac-ca 59
|||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 201 cttggccccatagtgtataggggaggggagtggagtcagagaagcctcctgaagaacaca 260
Query: 60 aggcgaggaagagtctcctgtgacaggcaagatcagaaggtgaagcaaccagggcctttt 119
|||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 aggcgaggaagagtcttgtgtgacaggcaagatcagaaggtgaagcaaccaaggcctttt 320
Query: 120 agcttaggaaaacggagagcagtgcactgagctgggagaaggaaccagaatcccgaggct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcttaggaaaacggagagcagtgcactgagctgggagaaggaaccagaatcccgaggct 380
Query: 180 gacagagagctgggaacaggccaacacagtctgtggtgacattccctggattaggtgaca 239
|||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 381 gacagacagctgggaacaggccaatacagtgtgtggtgacattccctggattaggtgaca 440
Query: 240 tctgggaatccctgtgagtttttgagaagaaaactgacatgaccaagggagt 291
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgggaatccctgtgagtttttgagaagaaaactgacatgaccaagggagt 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 692
Length adjustment: 9
Effective length of query: 282
Effective length of database: 683
Effective search space: 192606
Effective search space used: 192606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no056_n07.g1 MSMg01no056_n07.g1 CHROMAT_FILE:
MSMg01no056_n07.g1 PHD_FILE: MSMg01no056_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:35 2005
(297 letters)
>mm_chr2_72665028_72665724
Length = 697
Score = 551 bits (285), Expect = e-161
Identities = 294/297 (98%)
Strand = Plus / Minus
Query: 1 cactttctagacagggaaatggagtgtgaggagctcagagcaagtcagcagcagccccat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cactttctagacagggaaatggagtgtgaggagctcagagcaagtcagcagcagccccac 438
Query: 61 agccccaggattccagctaagtgcctgcagaatagaaggcctctgtagacgcatacagaa 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 437 agccccaggattccagctaagcgcctgcagaatagaaggcctctgtagacgcatacagaa 378
Query: 121 ctccattgacatagttttatccggaacatcaagatttgcatggagcaattcttaaataag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ctccattgacatagttttatccggaacatcaagatttgcatggagcaattcttaaataag 318
Query: 181 atttaattaccgactggctataagatgtggtggaatgaaaaagtgacatcagggctttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atttaattaccgactggctataagatgtggtggaatgaaaaagtgacatcagggctttgt 258
Query: 241 ttgtactgcccaggatggcagagggtgagaagctgtggtatttacgtcaggaatctg 297
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 257 ttgtactgcccaggatggcagagggcgagaagctgtggtatttacgtcaggaatctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
