Query= MSMg01no058_a13.b1 MSMg01no058_a13.b1 CHROMAT_FILE:
MSMg01no058_a13.b1 PHD_FILE: MSMg01no058_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:11 2005
(430 letters)
>mm_chr2_52098522_52099351
Length = 830
Score = 822 bits (425), Expect = 0.0
Identities = 428/429 (99%)
Strand = Plus / Minus
Query: 2 atatataaagcttaccttcccaatgtttccagttcttattcttcactctgagatcaagtg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 atatataaagcttaccttcccaatgtttccagttcttattcttcactctgagatcaagtg 571
Query: 62 ttgcagcatgttcattagcacttgcttttgtgttggatctcattagactgtagagcattt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ttgcagcatgttcattagcacttgcttttgtgttggatctcattagactgtagagcattt 511
Query: 122 ttatcttttagtggatgaagggaaatggctggattcccattgggtctctggatgtggtca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ttatcttttagtggatgaagggaaatggctggattcccattgggtctctggatgtggtca 451
Query: 182 agtataagaccaacacagattcttagtgataagatctcctttttcctctacccagaatgt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 agtataagaccaacacagattcttagtgataagatctcctttttcctctacccagaatgt 391
Query: 242 gtacaagtcagatctccagtggatgagaggcattggctgggtccccatcgggtctctgga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gtacaagtcagatctccagtggatgagaggcattggctgggtccccatcgggtctctgga 331
Query: 302 tgtggtcaagtgtaagagagctgcagagatcctgagcgacaacatctatcgccagtctcc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 330 tgtggtcaagtgtaagagagctgcagagatcctgagcgacaacatctatcgccagcctcc 271
Query: 362 aaacaagtttaagttcaccagtgtgactgattctctggagcaggtgctggccaagagcaa 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aaacaagtttaagttcaccagtgtgactgattctctggagcaggtgctggccaagagcaa 211
Query: 422 cgccctcaa 430
|||||||||
Sbjct: 210 cgccctcaa 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no058_a13.g1 MSMg01no058_a13.g1 CHROMAT_FILE:
MSMg01no058_a13.g1 PHD_FILE: MSMg01no058_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:11 2005
(465 letters)
>mm_chr2_51969979_51970837
Length = 859
Score = 857 bits (443), Expect = 0.0
Identities = 457/465 (98%), Gaps = 6/465 (1%)
Strand = Plus / Plus
Query: 1 aattctttagaaggcttgtacaacttaactagaataactattgtactactgcttgatagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattctttagaaggcttgtacaacttaactagaataactattgtactactgcttgatagg 260
Query: 61 aacttaggtttagtgtctgtttctgtctctgtctctcgttgaagacagggtcttgctatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacttaggtttagtgtctgtttctgtctctgtctctcgttgaagacagggtcttgctatg 320
Query: 121 tagtcctggctatacttgggaagatttaatttctgtggtagatacttacaggttgcccat 180
||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 tagtcctggctatacttgggaagatttaatttctgtggtagatactt------tgcccat 374
Query: 181 tcttaagaatcaatcctagaacatatggaatgatactaatatccgctatatattttagca 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tcttaagaatcaatcctagaagatatggaatgatactaatatccgctatatattttagca 434
Query: 241 aatagctcaatgtgaacatattgtagtcctttacaagaagccaattcagccacagtgagg 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 435 aatagctcaatgtgaacatattgtagtcctttacaagaagcaaattcagccacagtgagg 494
Query: 301 ttaagatagataaaaattgttgccctgtggccacaatatttgtattgccttcagagagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ttaagatagataaaaattgttgccctgtggccacaatatttgtattgccttcagagagtt 554
Query: 361 tagggcagggcacaggagatagcgtgggggatctcatgtttgcaaagcaaccatgaggac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tagggcagggcacaggagatagcgtgggggatctcatgtttgcaaagcaaccatgaggac 614
Query: 421 ctgagttcagtttctagaacccacgcttaaagtaagaatcctggg 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ctgagttcagtttctagaacccacgcttaaagtaagaatcctggg 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 859
Length adjustment: 10
Effective length of query: 455
Effective length of database: 849
Effective search space: 386295
Effective search space used: 386295
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
