Query= MSMg01no058_b13.b1 MSMg01no058_b13.b1 CHROMAT_FILE:
MSMg01no058_b13.b1 PHD_FILE: MSMg01no058_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:16 2005
(151 letters)
>mm_chr2_44744193_44744744
Length = 552
Score = 252 bits (130), Expect = 1e-71
Identities = 143/152 (94%), Gaps = 9/152 (5%)
Strand = Plus / Minus
Query: 5 gaattcccattttccagtggaagggttaaaaattctaagaagcttttcttgaaataaagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gaattcccattttccagtggaagggttaaaaattctaagaagcttttcttgaaataaagc 293
Query: 65 ttgtccttccccc-----ttaagtgtgcttgcctcttatctgtggatttcatccctggtt 119
|||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ttgtcctt----cagttattaagtgtgcttgcctcttatctgtggatttcatccctggtt 237
Query: 120 ttagtattaactgctttttgttaggatcatag 151
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Sbjct: 236 ttagtattaactgctttttgttaggatcatag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 552
Length adjustment: 8
Effective length of query: 143
Effective length of database: 544
Effective search space: 77792
Effective search space used: 77792
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no058_b13.g1 MSMg01no058_b13.g1 CHROMAT_FILE:
MSMg01no058_b13.g1 PHD_FILE: MSMg01no058_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:16 2005
(174 letters)
>mm_chr2_44625059_44625632
Length = 574
Score = 313 bits (162), Expect = 3e-90
Identities = 171/174 (98%)
Strand = Plus / Plus
Query: 1 ttataaaatgtcccaaagtcagtaatccttatgcctaattaatcccctctctaaggtata 60
||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 ttataaagtgtcccaaagtcagtaatccttatgcctaattaatcttctctctaaggtata 260
Query: 61 ggtaatttaacaggcatttataaattttcttattaaaaagatccccttattattaaacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtaatttaacaggcatttataaattttcttattaaaaagatccccttattattaaacat 320
Query: 121 ataatatataataatattttaagtagcagtagggaaaaacaaaattactgaggc 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataatatataataatattttaagtagcagtagggaaaaacaaaattactgaggc 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
