Query= MSMg01no058_e09.b1 MSMg01no058_e09.b1 CHROMAT_FILE:
MSMg01no058_e09.b1 PHD_FILE: MSMg01no058_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:29 2005
(523 letters)
>mm_chr2_57634902_57635824
Length = 923
Score = 973 bits (503), Expect = 0.0
Identities = 515/519 (99%)
Strand = Plus / Plus
Query: 5 gaattcaatcccagttctcaaaattgggaggaagcaatctcaccatttgcaaacaaatac 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatcccagttgtcaaaattgggaggaagcaatctcaccatttgcaaacaaatac 264
Query: 65 actactcataacaaaaaaatcagcatctcagttgatttatttctttgtatgttgaatact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 actactcataacaaaaaaatcagcatctcagttgatttatttctttgtatgttgaatact 324
Query: 125 gacatgttaagtaacaatgtattgctgaaaattagtttttcaaaacaaatttaaattaat 184
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gacacgttaagtaacaatgtattgctgaaaattagtttttcaaaacaaatttaaattaat 384
Query: 185 gtttttaaattgcaaatgattaaagaaaaaatgaataggatttaccttcaaaaagaaaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtttttaaattgcaaatgattaaagaaaaaatgaataggatttaccttcaaaaagaaaag 444
Query: 245 tagaaaagatgtgtgataattgcatataccacacagatgtctagaatttttacttcatat 304
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tagaaaagatgtatgataattgcatataccacacagatgtctagaatttttacttcatat 504
Query: 305 atacatgaaaatactaaaatggagatgcatgggtgaggaaatgtgagaaactttaaatta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atacatgaaaatactaaaatggagatgcatgggtgaggaaatgtgagaaactttaaatta 564
Query: 365 ttgaagagttaaaaagaaaacttatagttaagaaataaagcaattgtgaaatatgtatgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttgaagagttaaaaagaaaacttatagttaagaaataaagcaattgtgaaatatgtatgt 624
Query: 425 tatgaaataatactatagatgatctattatttatgtaaaaatattttccttcaatgtgca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tatgaaataatactatagatgatctattatttatgtaaaaatattttccttcaatgtgca 684
Query: 485 tatgtatgagaactggtgacatgagaaagaaaacaaagg 523
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 685 tatgtatgagaactggggacatgagaaagaaaacaaagg 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no058_e09.g1 MSMg01no058_e09.g1 CHROMAT_FILE:
MSMg01no058_e09.g1 PHD_FILE: MSMg01no058_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:29 2005
(237 letters)
>mm_chr2_57751428_57752065
Length = 638
Score = 445 bits (230), Expect = e-129
Identities = 236/238 (99%), Gaps = 1/238 (0%)
Strand = Plus / Minus
Query: 1 atcaagaatttggcacctctgttcctgcgttttggggaagaacctcaaatgaagagcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atcaagaatttggcacctctgttcctgcgttttggggaagaacctcaaatgaagagcaga 379
Query: 61 tgtggaatgggaaatcacagcaaagcttctgtgagtgg-aaaatccacaatactggagag 119
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 378 tgtggaatgggaaatcacagcaaagcttctgtgagtggaaaaatccacaatactggagag 319
Query: 120 cattttccagaagactgaacttgtgtgcaatctttgttgcttaaagtgtactccttttgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cattttccagaagactgaacttgtgtgcaatctttgttgcttaaagtgtactccttttgt 259
Query: 180 ttggatgtttgtttttaatgagacaagtgattgctcataccagcgtttgtgtatctca 237
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 258 ttggatgtttgtttttaatgagacaagtgattgctcataccagtgtttgtgtatctca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 638
Length adjustment: 9
Effective length of query: 228
Effective length of database: 629
Effective search space: 143412
Effective search space used: 143412
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
