AXXXXXXXXXXXXXXXXXXXXXXXXCTAATGCGAGAAGAGGCGCGGAATT
CTCCTTATTTGCGACTTTAAAAACAGATGGGCAAGATTAAAAGCACAGAA
ATGTTTACAGCTGACACAGATGTCTGTGAGCAGTGCAGGAAGGTCCTCTT
TTTCAAAGAAGGGTTGCCATATTTGGAAAATAAAAATATAGCAGTTAAGT
TCAAATAAAAAGAAAAAACAGCAAATACTTTAAAAAACAGTCACAAGATG
TCATAGAGCCTGAACACAGAGCATAATGATTAGCATGCATGAAGCCCCAC
ACTTAATTCTGAGATTCTCCCACTTGAAGTTCATATAAACTGTTCCCCAA
GTATTGGAAGGAACATACTAATACTAAAGTATAAAAAAATTATTTCTTGT
CTGTCTGAAATTCAAATTTAGTTCCATGTTCTGGAGTTCATCTGCTAGTC
CTGTTTTTGGAGAGCTGTTACTCCTGTCACCCAACTTAAGAACTGTAACT
CTTTAATAATGATTTAAGGGGGCTGGTGAGATGGCTGAGCGGTTAAGAGT
GCCTACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGG
TGGCTCACAACCATCCATAACAAAATCTGATGCCCTCTTCTGGAGTGTCT
GAAGACAGCTACTTACATATAATAGATAAATAAATATTTTTTTAAAAGAG
TGATTTAATTTCCA

TGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTCTATCTCTTAGCATTAAGCCAAGAAAATTC
TGCAGAAATGTCCTACTTATTCTTTATATAACCAAACTCTATGGAAATAA
CCTTGAAGATACCCAAAGAAATAAAATTTGGCAAATGGGTATGTTCTATT
TTACAGAGCTTGGTAAACTAAATTACATGCATCATACAATAGGCATATAT
TCAGGAGTTCAATGGACAAATGAAGCTGTTTTAGCTTCTGAAAAGGGTGA
TTCTATAATTACACATTTGTTGGAAGTTATGGGCATTATGGAAATATCCA
TACAAATTAAAAGTTACAATGCTCCAGCATAGTCTCTAATAAGATAAAGC
ATTTTTTAATATACTAGGGTATAAAACATGTTATAGATTTACCACATAAT
CCTACAAGACAAGCAACTGTGGAGAGATATAACAATATGATATGCTTATC
AAACAATAGGGTGCAAGAGAATCTCAGAGATAGATTACATAATGCTTTAT
TGACCTTAAGTATTTAAACACTAATGAACCAAAACCTATGGCTAATAAAA
GACATTGAATTATGGAAAAAATGCTTAACTATCCTATCCTGTCCTAACCT
CAGAATGGAAAACAGGAAATGTCTTCCTTACTGACACGGGGGGAGAGGTT
ATGCCTTTAT

Query= MSMg01no059_n19.b1 MSMg01no059_n19.b1 CHROMAT_FILE:
MSMg01no059_n19.b1 PHD_FILE: MSMg01no059_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:28 2005
         (624 letters)



>mm_chr2_18417235_18418258
          Length = 1024

 Score =  942 bits (487), Expect = 0.0
 Identities = 499/503 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   gaattctccttatttgcgactttaaaaacagatgggcaagattaaaagcacagaaatgtt 63
           ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gaattctccttaagtgagactttaaaaacagatgggcaagattaaaagcacagaaatgtt 444

                                                                       
Query: 64  tacagctgacacagatgtctgtgagcagtgcaggaaggtcctctttttcaaagaagggtt 123
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tacagctgacacagatgtgtgtgagcagtgcaggaaggtcctctttttcaaagaagggtt 384

                                                                       
Query: 124 gccatatttggaaaataaaaatatagcagttaagttcaaataaaaagaaaaaacagcaaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gccatatttggaaaataaaaatatagcagttaagttcaaataaaaagaaaaaacagcaaa 324

                                                                       
Query: 184 tactttaaaaaacagtcacaagatgtcatagagcctgaacacagagcataatgattagca 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tactttaaaaaacagtcacaagatgtcatagagcctgaacacagagcataatgattagca 264

                                                                       
Query: 244 tgcatgaagccccacacttaattctgagattctcccacttgaagttcatataaactgttc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgcatgaagccccacacttaattctgagattctcccacttgaagttcatataaactgttc 204

                                                                       
Query: 304 cccaagtattggaaggaacatactaatactaaagtataaaaaaattatttcttgtctgtc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cccaagtattggaaggaacatactaatactaaagtataaaaaaattatttcttgtctgtc 144

                                                                       
Query: 364 tgaaattcaaatttagttccatgttctggagttcatctgctagtcctgtttttggagagc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 tgaaattcaaatttagttccatgttctggagttcatctgctagtcctgtttttggagagc 84

                                                                       
Query: 424 tgttactcctgtcacccaacttaagaactgtaactctttaataatgatttaagggggctg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83  tgttactcctgtcacccaacttaagaactgtaactctttaataatgatttaagggggctg 24

                                  
Query: 484 gtgagatggctgagcggttaaga 506
           |||||||||||||||||||||||
Sbjct: 23  gtgagatggctgagcggttaaga 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space:   622596
Effective search space used:   622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)